Heatmap: Cluster_274 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Cambium and expanding xylem
Cambium
Expanding xylem
Expanding and mature xylem
Maturing xylem
Maturing xylem and dead early wood
Wood
Dead early and late wood
Dead early wood
Dead late wood
Vegetative shoots - needles
Vegetative shoots - stem
Vegetative shoots
Girdled twig - stem
Dried twig - needles
Girdled twig - needles
Needles
Needles - dawn
Needles - later afternoon
Needles - midday
Needles - night
Buds
Female flower
Male flower
Pineapple galls
Somatic germinants - abnormal type
Somatic germinants - normal type
Cell culture - H20 - 5 days
Cell culture - KI added - 5 days
Cell culture - KI added - 20 days
Cell culture - KI removed - 4 days
Cell culture - KI removed - 12 days
Cell culture - solid medium
1.11 1.63 0.62 1.0 0.18 1.23 0.6 0.05 0.14 0.96 -3.95 0.42 -1.05 -0.09 -4.25 -4.88 0.71 -6.6 -5.48 - -4.86 0.27 0.39 -0.98 0.32 0.06 0.54 -2.95 -0.23 0.49 -1.74 -2.58 -0.18
1.54 1.07 1.14 1.16 0.71 0.57 1.2 -0.0 0.22 0.83 -1.27 0.28 -1.44 -0.37 -0.98 -2.14 -0.16 -1.93 -2.25 -2.78 -1.51 0.31 -0.8 -1.56 -0.43 -0.06 0.23 -0.37 -0.6 -1.04 -0.5 -0.73 -0.8
0.98 1.55 -0.11 0.57 0.51 1.05 -1.05 0.33 0.75 1.06 -0.61 -0.57 -0.28 -0.84 -2.8 -1.84 0.68 -0.4 -1.44 -1.27 -1.01 -1.26 1.0 -5.14 0.06 -0.09 0.43 -1.06 -0.1 -0.13 -0.69 -1.09 -0.48
0.6 0.87 -0.01 0.35 -0.41 0.11 0.16 -0.01 -0.2 0.27 -0.45 -0.31 -0.27 -0.21 0.41 -0.11 -0.3 -0.24 -0.59 -0.34 -0.66 -0.32 -0.16 -0.67 -0.08 -0.25 -0.24 0.29 0.11 0.07 0.3 0.35 0.42
1.23 1.25 1.13 0.73 0.36 -0.58 0.13 0.7 0.36 0.03 -1.31 0.74 0.42 0.5 -1.04 -1.23 -0.13 -1.08 -1.46 -1.54 -1.58 0.96 -0.5 1.1 0.4 -0.81 -0.66 -1.77 -1.27 -1.15 -1.88 -2.48 -1.47
1.4 2.0 0.79 0.84 -0.0 -0.21 0.5 -0.66 -0.85 -0.91 -0.04 -0.48 0.41 -0.1 -0.61 -0.13 0.4 0.13 -0.17 -0.24 -0.19 0.28 0.26 -0.31 0.74 -0.6 -0.61 -3.24 -2.58 -2.23 -2.53 -2.53 -2.0
1.12 1.17 0.67 0.57 -0.24 -0.26 -0.08 0.18 -0.0 -0.21 -0.94 -0.73 0.07 -0.17 -0.73 -0.78 0.29 -0.74 -0.8 -0.98 -0.87 -0.25 0.33 0.35 -0.63 0.2 0.28 0.0 0.11 0.05 -0.01 -0.34 -0.14
0.8 1.38 0.21 0.46 -0.04 0.04 -0.27 0.97 0.4 0.92 -1.47 -0.32 -1.09 -0.6 -0.74 -2.03 0.73 -1.72 -1.95 -1.72 -1.96 -0.14 -0.56 -2.15 -0.26 0.12 0.56 -0.01 0.53 0.48 -0.05 -0.15 0.36
1.11 1.04 0.72 0.73 0.45 0.71 0.03 1.07 0.7 0.65 -1.41 -0.74 -0.95 -0.95 -0.59 -1.5 0.52 -1.13 -1.42 -1.64 -1.52 -0.34 -0.27 -0.65 -0.6 -0.31 -0.06 -0.23 -0.07 0.07 -0.34 -0.31 0.06
0.91 0.79 0.95 0.96 0.64 0.06 0.94 0.32 -0.43 0.26 -1.39 -0.15 -0.95 -0.32 -0.99 -1.67 -0.0 -1.09 -1.53 -1.36 -1.39 -0.0 -0.02 -0.46 -0.22 -0.1 0.03 -0.31 0.23 0.27 -0.09 -0.02 0.19
1.51 1.19 1.22 1.0 -0.3 -0.96 0.42 -0.02 -0.6 -0.63 -1.15 -0.29 0.95 -0.75 0.2 -0.86 0.58 -0.73 -0.96 -0.79 -0.86 0.09 0.04 -0.34 0.65 -0.42 -0.22 -0.69 -1.12 -0.92 -0.95 -0.72 -0.89
0.44 0.89 0.73 1.28 0.43 0.38 0.06 0.11 -0.4 0.37 -1.11 -0.16 0.25 -0.73 -0.3 -0.71 -0.27 -0.68 -1.18 -0.81 -0.81 0.03 -0.21 -0.39 0.27 -0.19 -0.14 -0.18 -0.1 -0.1 -0.07 -0.41 0.25
0.83 1.29 0.56 0.73 0.23 0.4 -0.14 0.81 0.35 0.58 -0.77 -0.1 -0.5 -0.39 -0.33 -0.85 -0.07 -0.69 -0.77 -0.98 -0.9 0.01 -0.12 -0.12 -0.16 -0.12 -0.12 -0.49 -0.29 -0.29 -0.57 -0.43 -0.23
1.29 1.01 1.16 1.15 -0.13 -0.26 0.64 -0.32 -0.65 -0.31 -1.37 -0.11 -0.24 -0.16 -0.49 -1.52 0.36 -1.24 -1.35 -1.33 -1.4 0.04 0.09 -0.69 -0.19 0.09 0.25 -0.17 -0.0 0.19 -0.15 -0.4 0.04
1.4 2.11 0.62 1.03 0.54 0.98 0.22 0.69 0.59 0.01 -2.77 -1.73 -2.38 -0.76 -1.34 -2.18 -0.19 -4.58 -2.8 -3.26 -2.04 -0.79 -0.7 -1.57 -0.55 0.21 0.35 -0.18 0.27 -0.01 -0.4 -0.33 0.27
1.35 1.08 0.99 0.7 0.48 1.08 0.05 1.48 1.35 0.97 -1.51 -0.43 -1.58 -0.77 -1.0 -1.27 -1.04 -1.88 -1.44 -1.91 -1.41 -0.72 -0.95 -2.22 -0.45 -0.06 0.0 -0.67 -0.41 -0.22 -0.84 -0.98 -0.23
0.43 1.07 -0.04 0.21 -0.34 0.24 0.54 0.16 -0.04 0.15 -1.39 0.43 0.31 0.08 -1.44 -1.42 0.47 -1.38 -1.42 -1.71 -1.5 0.37 0.51 -0.26 0.42 -0.09 0.04 -0.31 -0.02 0.49 -0.08 -0.14 0.42
0.8 1.5 0.11 0.07 -0.14 0.18 -0.08 -0.54 -0.26 0.03 -0.49 -0.24 -0.52 -0.3 0.36 -0.62 -0.32 -0.31 -0.72 -0.75 -0.66 -0.1 -0.3 -0.62 -0.19 0.25 0.41 -0.11 0.37 0.36 -0.04 -0.08 0.16
1.52 1.29 1.31 1.02 0.45 -0.33 0.75 0.77 0.08 -0.71 -2.57 -1.29 -0.31 -1.41 -0.96 -1.97 0.47 -1.37 -2.39 -1.56 -1.94 -0.14 0.07 0.03 -0.16 0.6 0.57 -1.04 -0.76 -0.3 -0.3 -0.63 -0.62
1.44 1.42 0.89 0.27 0.43 0.09 1.0 0.37 -0.06 -0.19 -1.35 0.3 -0.02 0.62 -1.3 -0.89 -1.02 -1.01 -1.36 -0.77 -1.42 0.74 0.44 -0.24 -0.2 -0.02 -0.2 -1.58 -0.54 -0.62 -1.65 -1.77 -0.5
0.95 1.66 0.33 0.72 -0.12 0.27 1.13 -0.33 -0.37 -0.33 -1.03 -0.49 0.42 -0.7 -0.35 -0.34 0.09 -0.72 -0.94 -0.56 -0.78 0.32 0.27 0.43 -0.38 -0.43 -0.31 -0.63 -0.73 -0.5 -0.67 -0.26 -0.74
0.94 1.29 0.71 0.96 0.43 0.41 -0.41 0.46 -0.15 0.49 -1.03 0.11 -1.25 -0.23 -0.21 -1.34 0.22 -1.13 -1.06 -1.33 -0.85 -0.48 -0.37 -1.66 0.03 0.37 0.37 -0.33 -0.04 -0.02 -0.33 -0.31 0.03
0.99 0.67 0.97 0.86 0.42 0.09 0.75 0.47 -0.09 -0.24 -1.26 -0.19 0.22 -0.02 1.07 -0.68 -0.26 -0.83 -1.25 -1.5 -1.11 0.25 -0.3 -0.55 -0.03 -0.79 -0.66 -0.44 -0.2 -0.23 -0.41 -0.5 -0.33
0.9 1.08 0.82 0.83 -0.09 -0.26 0.11 -0.13 -0.72 -0.28 -1.07 -0.48 0.19 -0.29 -1.03 -1.05 0.23 -1.32 -1.5 -1.54 -1.41 0.06 0.3 0.46 -0.42 -0.09 -0.05 0.08 0.34 0.43 0.32 0.15 0.23
1.44 1.29 0.98 0.74 0.15 0.69 0.54 -0.1 -0.04 -0.79 -1.92 -0.58 0.31 -0.29 -2.23 -1.89 0.31 -1.31 -2.72 -2.18 -2.54 0.42 -0.37 0.16 0.84 -0.82 -0.4 -0.13 0.21 0.13 -0.25 -0.64 -0.18
0.9 0.78 0.88 0.64 0.58 0.61 -0.23 0.95 0.53 0.47 -0.7 -0.62 -0.12 -0.71 -1.21 -1.11 0.0 -0.66 -0.71 -0.8 -0.7 -0.07 -0.2 -0.8 -0.53 -0.15 0.14 -0.39 -0.2 -0.15 -0.24 -0.15 -0.19
1.3 1.6 0.37 1.22 0.21 0.32 -0.07 0.07 0.6 0.68 -1.45 -1.03 -2.33 -0.92 -0.02 -2.18 -0.19 -1.19 -2.49 -1.98 -1.59 -0.85 0.01 -1.86 -1.22 -0.11 0.03 0.46 0.3 0.26 0.45 -0.15 0.28
0.82 1.1 0.53 0.56 0.23 0.27 0.11 0.49 0.24 0.07 -0.56 -0.64 -0.67 -0.13 -0.2 -1.04 0.03 -0.28 -0.84 -1.21 -0.91 -0.22 -0.3 -0.6 -0.21 0.03 0.06 -0.06 0.26 0.21 -0.21 -0.27 0.31
1.36 1.35 1.01 0.49 0.41 0.46 0.12 0.15 0.64 -0.18 -0.97 -0.39 -0.42 -1.5 -0.73 -0.86 0.56 -0.75 -1.02 -2.05 -0.66 0.24 0.02 0.15 -0.05 -0.29 -0.02 -0.71 -0.64 -0.3 -0.74 -0.84 -0.23
0.94 1.62 0.32 0.72 0.27 0.69 -0.56 0.5 -0.37 0.24 -0.54 -0.77 -0.04 -0.34 -0.74 -0.76 0.05 0.12 -0.36 -0.94 -0.7 0.04 0.08 -1.17 -0.35 -0.33 -0.06 -0.51 -0.02 -0.11 -0.18 -0.65 -0.37
1.22 1.15 0.37 0.05 -0.22 0.0 0.36 0.78 0.56 0.13 -0.17 -0.56 0.16 -0.53 -0.55 0.12 -0.27 0.27 -0.17 -0.09 -0.13 -0.26 -0.37 -0.29 -0.35 0.0 0.01 -0.76 -0.92 -0.77 -0.77 -0.64 -0.66
2.1 1.99 1.28 0.86 0.32 0.77 0.6 0.68 0.49 0.3 -2.73 -1.21 -0.72 -1.03 -3.54 -2.81 -0.13 -2.49 -3.1 -2.92 -2.89 -0.83 -0.53 0.03 -0.62 0.06 0.12 -1.46 -0.75 -0.56 -1.05 -1.26 -0.3
1.74 2.0 1.21 1.67 0.2 0.47 -0.88 1.58 1.13 0.97 -0.55 -1.7 -3.63 -1.69 -3.15 - -0.14 -3.08 -4.18 -1.25 -2.41 - -1.81 - -2.31 -0.11 0.04 -1.05 -1.17 -0.33 0.01 -0.2 -0.43
0.59 0.86 0.48 0.82 0.24 0.61 0.13 0.43 0.16 0.24 -0.81 -0.36 -0.75 -0.33 0.42 -0.66 0.02 -0.45 -0.78 -0.85 -0.66 -0.27 -0.48 -0.8 -0.4 -0.13 -0.07 -0.11 0.21 0.26 -0.2 -0.34 0.22
1.22 1.46 0.69 0.48 0.29 0.28 0.11 0.9 0.74 0.06 -0.96 -0.29 -0.2 -0.19 -0.76 -0.88 -0.26 -0.79 -1.06 -1.62 -1.0 0.08 0.07 0.07 -0.16 -0.11 -0.12 -0.83 -0.41 -0.24 -0.82 -1.07 -0.33
1.13 1.44 0.63 0.51 0.25 0.27 -0.2 0.64 0.17 0.28 -1.0 -0.42 -0.32 -0.55 -0.68 -0.92 -0.02 -1.17 -1.09 -1.54 -1.44 -0.02 0.03 0.45 -0.13 -0.01 0.03 -0.38 0.0 0.0 -0.46 -0.62 0.03
0.64 1.19 0.79 0.88 0.07 -0.81 -0.04 -1.29 -1.76 -0.37 0.03 -0.66 -0.25 -0.31 0.03 -0.14 0.39 0.54 0.08 -0.27 0.58 -0.07 0.35 -1.15 0.16 -0.43 -0.18 -0.28 -0.17 -0.2 -0.13 -0.45 -1.09
0.96 1.06 0.35 0.4 -0.24 -0.61 0.19 0.41 0.07 -0.03 -0.91 -0.33 -0.54 -0.22 0.33 -1.02 -0.07 -0.58 -0.89 -0.84 -0.9 0.19 0.44 -0.58 -0.12 -0.35 -0.22 0.03 0.26 0.43 0.18 0.0 0.08
2.01 1.23 1.87 1.51 -1.59 -0.83 1.87 -3.0 -1.87 -1.89 -1.63 -1.3 -0.42 -4.89 1.98 -1.88 0.16 -4.0 -1.55 -4.17 -2.15 -2.32 -4.4 -1.7 0.39 0.44 0.51 -0.73 -1.53 -0.52 -0.79 -1.68 -2.17
1.21 1.29 0.18 0.05 -0.36 0.08 -0.32 -0.16 -0.12 -0.79 -0.07 -0.71 -0.79 -0.57 0.63 0.14 -0.18 0.49 -0.07 0.2 -0.06 -0.44 -0.19 -0.99 -0.05 0.23 0.35 -0.35 -0.53 -0.34 -0.25 -0.31 -0.36
0.32 0.82 0.26 0.57 -0.1 -0.07 0.65 -0.44 -0.45 -0.34 -0.61 -0.16 -0.03 -0.33 -0.2 -0.27 0.54 -0.37 -0.78 -0.64 -0.61 0.24 0.17 0.01 0.0 -0.06 0.12 -0.26 0.03 0.4 -0.23 -0.2 0.25
1.47 1.37 1.29 0.61 0.66 -0.33 0.33 1.83 0.88 0.51 -1.29 -0.42 -0.05 -1.93 -0.25 -1.69 -0.49 -3.44 -3.49 -4.37 -3.14 -0.23 0.29 -1.24 -0.21 -0.13 0.08 -1.85 -0.49 -0.26 -0.95 -1.76 -0.65
1.15 1.02 0.83 0.69 0.49 -0.32 0.33 0.78 0.3 -0.09 -1.94 -0.61 -0.03 -0.93 -0.75 -1.23 0.31 -1.47 -1.72 -2.22 -1.4 0.14 0.06 -0.09 -0.27 0.11 0.16 -0.19 0.26 0.31 -0.3 -0.52 0.22
2.72 1.71 1.99 0.94 -1.22 0.88 2.62 -1.88 -0.03 0.58 - - - - - - -6.17 - - - - - -2.15 -2.28 -1.99 - - -3.34 0.72 1.19 -1.75 -1.84 -0.37
1.49 1.26 1.02 0.43 0.48 0.47 0.82 0.82 0.61 -0.1 -1.1 -0.71 -0.12 -0.38 -0.08 -1.04 -0.13 -0.6 -1.27 -1.48 -1.51 0.09 -0.08 0.37 -0.13 -0.14 -0.12 -1.13 -0.82 -1.16 -1.13 -1.39 -1.3
0.72 1.35 -0.09 0.16 -0.26 0.02 0.9 -0.34 -0.26 -0.04 -0.17 0.29 0.11 0.39 -0.7 0.03 -0.27 0.62 0.45 -0.26 0.32 -0.17 0.03 0.56 -0.6 -0.63 -0.61 -1.11 -0.93 -0.55 -0.97 -1.09 -1.0
1.37 0.99 0.87 0.3 0.52 0.15 0.37 0.79 0.49 -0.14 -0.76 -0.04 0.0 0.08 -0.46 -0.5 -0.15 -0.66 -0.82 -0.74 -0.89 0.29 0.35 -0.3 0.34 -0.1 -0.1 -1.39 -1.02 -0.92 -1.43 -1.33 -0.72
0.88 1.1 0.32 0.41 0.17 0.43 0.28 0.33 0.28 0.03 -0.58 -0.26 -0.47 0.1 -0.1 -0.57 -0.0 -0.34 -0.49 -0.86 -0.58 -0.21 0.28 -0.2 -0.47 0.13 0.22 -0.54 -0.05 -0.12 -0.29 -0.68 -0.49
1.31 0.87 0.88 0.1 -0.29 0.04 0.31 0.07 0.03 -0.63 -0.58 -0.2 0.15 -0.83 -1.28 -0.97 0.17 -0.8 -0.69 -0.88 -0.64 0.12 -0.22 0.32 -0.16 -0.43 -0.36 -0.08 0.52 0.29 0.01 -0.11 0.26
1.51 1.64 1.2 1.18 -0.07 -0.77 0.83 -0.28 -0.56 -0.4 -1.02 -0.34 -0.63 -0.14 -1.39 -1.32 0.2 -0.88 -2.05 -1.41 -1.95 -0.29 -0.07 -0.1 -0.22 -0.49 -0.36 -0.29 0.16 0.16 -0.44 -0.49 0.22
0.95 1.09 0.71 0.54 0.25 0.51 0.2 0.5 -0.12 0.23 -1.27 -0.46 0.23 -0.61 -0.66 -1.46 0.12 -1.15 -1.01 -1.19 -1.05 0.15 0.46 -0.36 -0.28 -0.28 -0.15 0.05 -0.15 0.05 -0.07 -0.08 -0.04
1.85 2.36 1.7 1.63 0.21 -0.25 -0.91 0.95 0.47 0.02 -2.85 -0.31 -0.67 -1.16 -2.88 -4.39 0.52 -4.23 -5.33 -4.4 -5.36 -0.01 -1.84 -1.23 -0.6 0.02 0.13 -1.33 -0.36 -0.76 -2.47 -2.15 -0.68
0.84 1.56 0.24 0.4 -0.65 0.04 -0.09 -0.03 -0.34 0.43 -0.75 -0.41 -0.17 -0.07 -1.06 -0.94 0.08 -0.48 -1.26 -1.01 -1.18 0.05 -0.08 0.34 -0.93 0.31 0.47 -0.07 0.3 0.3 -0.13 -0.2 0.18
0.44 0.82 0.52 0.59 0.11 0.06 0.18 0.34 -0.08 0.27 -0.29 0.11 -0.31 0.14 0.01 -0.66 0.16 -0.33 -0.69 -0.4 -0.57 0.34 0.1 -0.98 0.16 -0.11 -0.17 -0.26 -0.24 -0.2 -0.31 -0.38 -0.08
1.92 1.54 1.29 0.76 0.51 -0.38 0.11 1.23 1.43 0.41 -1.44 -1.75 -0.98 -1.45 -1.17 -2.53 -0.34 -2.13 -2.64 -2.36 -2.32 -0.25 -0.35 2.3 -0.57 -0.97 -0.71 -4.19 -3.71 -3.37 -4.05 -3.83 -3.43
1.38 1.06 0.88 0.44 -0.03 0.6 0.56 0.64 0.38 0.72 -1.47 -0.02 -1.03 -0.33 -0.22 -0.67 -0.58 -1.23 -1.52 -1.05 -1.13 0.17 0.14 -0.39 -0.31 -0.29 -0.12 -0.69 -0.16 -0.11 -0.56 -0.85 -0.09
0.52 1.17 -0.05 0.13 -0.71 -0.57 0.79 -0.05 -0.06 0.56 0.02 0.33 -0.34 0.04 -0.09 -0.36 -0.45 -0.21 -0.15 -0.27 -0.22 0.29 -0.04 -0.36 -0.44 -0.47 -0.27 -0.07 -0.35 -0.27 0.17 -0.17 0.03
1.05 0.4 1.11 1.35 0.7 0.1 0.96 -0.1 -0.83 -0.77 -2.38 -1.16 -0.43 0.14 -2.66 -0.8 0.39 -1.33 -2.16 -1.64 -1.76 -0.03 -0.29 -0.77 0.14 -0.29 0.0 0.15 0.57 0.4 0.22 -0.42 0.38
1.1 0.86 0.57 0.42 0.24 0.92 0.27 0.95 0.61 1.14 -0.74 -0.1 -0.83 -0.9 -0.57 -1.18 -0.5 -0.77 -1.05 -1.33 -0.93 -0.33 0.04 -1.44 0.28 -0.11 0.07 -0.97 -0.29 0.04 -0.68 -1.0 -0.06
1.01 0.88 0.76 0.19 0.36 0.28 0.32 0.76 0.58 0.19 -0.33 -0.07 -0.54 -0.29 -0.12 -0.44 -0.53 -0.18 -0.42 -0.5 -0.35 -0.25 -0.09 -0.49 -0.17 0.11 0.0 -0.94 -0.54 -0.32 -0.71 -0.83 -0.22
1.89 1.71 1.35 0.83 0.71 0.36 0.42 1.53 0.56 0.27 -2.26 -0.64 -0.31 -1.17 -2.29 -2.57 0.75 -2.66 -3.28 -2.93 -3.03 -0.22 -0.13 -1.37 0.14 -1.41 -0.96 -1.36 -0.76 -0.63 -1.52 -1.62 -0.41

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.