Heatmap: Cluster_382 (HCCA cluster)

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(Showing raw values)

Gene
Cambium and expanding xylem
Cambium
Expanding xylem
Expanding and mature xylem
Maturing xylem
Maturing xylem and dead early wood
Wood
Dead early and late wood
Dead early wood
Dead late wood
Vegetative shoots - needles
Vegetative shoots - stem
Vegetative shoots
Girdled twig - stem
Dried twig - needles
Girdled twig - needles
Needles
Needles - dawn
Needles - later afternoon
Needles - midday
Needles - night
Buds
Female flower
Male flower
Pineapple galls
Somatic germinants - abnormal type
Somatic germinants - normal type
Cell culture - H20 - 5 days
Cell culture - KI added - 5 days
Cell culture - KI added - 20 days
Cell culture - KI removed - 4 days
Cell culture - KI removed - 12 days
Cell culture - solid medium
4.9 4.58 3.44 2.69 2.95 2.66 6.63 3.97 2.87 3.49 4.1 4.06 5.9 5.59 3.34 4.08 4.12 3.56 4.58 3.86 4.22 5.44 5.47 5.27 6.45 3.71 3.71 4.95 7.22 7.39 4.95 3.73 6.65
34.45 25.35 27.5 26.17 18.48 8.84 65.9 10.61 6.63 12.57 13.11 33.68 28.83 17.23 11.29 9.57 21.45 10.56 10.9 11.01 11.69 30.73 33.83 19.47 23.3 22.21 27.04 12.72 31.9 32.77 14.9 12.75 33.42
7.6 6.85 9.02 7.42 6.37 7.48 14.7 3.25 3.22 3.04 8.79 8.45 8.35 12.29 9.08 10.85 7.4 9.14 8.2 5.39 8.68 9.67 9.72 12.82 9.99 9.19 9.96 11.28 14.13 15.06 13.07 9.01 11.12
21.55 27.3 13.41 7.92 12.1 15.47 17.75 11.81 11.18 7.83 11.36 12.92 33.03 17.35 7.35 11.08 13.43 11.77 10.52 8.99 9.32 20.19 33.78 64.44 12.92 26.54 24.26 20.57 33.99 30.36 24.37 16.67 28.07
29.49 26.77 21.66 21.25 20.22 14.27 31.55 13.73 11.4 20.28 25.34 28.79 33.66 28.03 14.39 27.1 27.22 33.69 24.27 24.78 23.24 29.45 29.91 25.08 32.83 24.95 26.34 27.13 32.71 34.16 26.86 24.82 34.23
32.53 28.77 21.36 15.07 16.0 15.65 41.09 11.07 12.31 9.64 11.29 25.11 24.74 20.35 17.2 11.42 15.68 10.0 8.39 9.57 8.98 31.32 38.59 26.64 17.35 26.0 24.32 26.35 32.33 30.38 28.01 22.72 34.57
24.46 18.59 13.73 10.84 9.08 11.34 41.82 8.53 6.77 8.26 6.26 28.84 14.59 25.41 29.75 7.31 14.16 7.65 10.83 4.65 5.4 32.8 33.89 20.41 12.16 20.42 18.49 31.18 29.23 28.38 30.58 25.29 31.67
12.26 16.25 9.49 10.32 10.56 16.38 18.8 5.95 5.09 4.54 6.22 20.03 16.14 13.46 12.52 10.11 10.82 4.82 5.57 5.08 6.08 23.53 14.59 40.43 12.92 15.01 15.61 14.52 20.87 22.57 16.18 14.17 18.27
18.29 11.19 11.5 9.01 9.56 4.92 35.48 3.33 2.61 3.29 6.82 13.77 10.6 8.06 5.57 7.42 12.85 6.29 4.79 3.89 5.63 17.89 20.91 14.72 12.67 13.69 12.61 15.23 21.2 21.8 16.31 13.38 21.3
281.91 230.09 200.53 139.2 144.19 120.71 252.65 68.81 69.28 56.65 193.22 189.6 233.21 252.2 169.47 151.17 157.11 171.21 126.53 79.94 120.06 240.97 376.63 46.41 205.98 203.4 202.72 285.45 248.53 221.91 223.97 247.32 246.99
91.51 69.11 80.75 54.9 54.7 46.02 87.02 40.35 35.78 36.15 85.71 93.51 125.03 99.99 48.3 72.97 63.54 72.59 72.62 74.68 79.9 128.25 148.4 103.14 82.59 92.63 88.3 81.9 98.69 93.94 93.1 69.03 86.91
104.24 109.73 85.6 81.63 72.03 74.75 131.36 91.94 71.1 69.88 64.57 112.77 136.51 122.09 63.8 84.54 75.46 66.05 64.91 67.04 71.18 150.45 154.79 124.7 116.89 99.89 106.59 101.8 136.42 145.87 107.06 99.12 125.32
4.66 4.64 4.25 3.9 3.97 3.02 5.02 2.94 3.0 3.42 3.75 4.37 3.47 4.32 4.45 3.99 5.59 4.62 3.97 4.9 3.7 4.07 4.69 3.28 3.4 4.9 5.1 4.92 7.01 6.4 4.83 4.51 6.17
3.6 5.78 1.04 1.03 1.02 1.6 7.0 0.92 1.65 1.14 0.26 4.68 5.56 3.79 0.19 0.34 3.5 0.05 0.19 0.11 0.14 7.3 9.78 3.76 3.3 4.3 4.51 1.87 5.98 7.55 2.79 1.9 5.1
14.99 13.4 13.55 10.02 10.36 8.8 19.81 8.52 6.65 7.36 12.99 12.58 13.76 13.99 13.26 12.36 12.89 17.65 12.59 10.99 12.05 12.1 11.53 11.11 11.47 14.5 16.38 15.03 18.91 18.22 16.42 14.1 18.1
4.9 4.12 3.22 2.85 3.09 3.17 5.11 2.26 1.76 1.71 2.09 4.87 3.48 5.38 3.32 2.19 3.3 3.18 2.87 2.74 2.23 6.21 4.78 2.13 3.94 4.0 3.9 6.21 5.24 7.07 5.52 4.2 6.4
197.06 255.58 122.65 103.95 102.55 109.45 286.74 131.35 145.99 119.44 174.53 249.4 369.22 379.31 187.74 190.29 192.51 133.4 139.15 134.06 148.57 396.52 497.59 431.42 235.43 329.84 302.48 246.13 365.77 376.77 257.97 197.49 387.36
28.57 28.18 15.47 10.4 15.04 20.56 22.29 14.09 19.16 22.65 18.44 23.75 12.75 34.19 24.94 20.49 16.42 11.47 17.13 18.76 18.51 24.35 29.91 12.72 16.27 25.21 24.74 46.06 39.92 36.66 46.89 40.47 36.81
94.53 104.7 39.98 18.61 10.74 9.32 201.16 15.74 8.3 36.14 1.5 188.97 40.07 84.56 0.65 1.47 17.38 1.21 1.86 3.03 1.91 91.58 106.97 21.1 24.68 108.6 57.3 43.54 102.63 51.86 65.96 32.7 50.23
16.88 24.49 7.69 7.24 2.54 1.7 169.65 2.65 1.46 14.02 2.06 146.77 37.78 50.39 2.84 1.67 15.24 1.01 0.87 3.48 0.92 58.25 50.75 23.33 22.32 69.6 38.03 38.46 99.05 50.28 61.1 37.81 47.35
72.46 80.52 34.41 20.99 40.81 38.74 60.38 50.05 57.68 30.4 60.27 61.04 136.88 72.04 60.46 46.98 66.39 54.78 51.52 49.38 54.16 111.11 158.19 162.29 71.56 91.41 91.37 85.74 128.66 132.69 97.45 67.46 108.73
49.88 37.64 52.5 36.84 41.38 31.85 92.65 29.9 22.46 31.17 38.76 61.45 55.51 71.46 39.96 54.51 44.89 45.74 50.11 45.52 45.81 68.49 74.42 65.79 58.32 52.79 50.69 56.18 76.8 69.9 57.05 49.4 67.99
2.88 2.52 1.8 0.97 1.52 1.48 6.72 0.75 0.83 0.69 0.4 3.29 4.31 4.92 1.39 0.54 2.06 0.56 0.45 0.56 0.37 4.56 4.72 4.65 1.35 2.57 3.03 1.37 4.0 3.18 1.64 0.97 4.0
505.54 619.47 302.8 284.03 251.73 372.38 530.43 241.24 241.19 248.11 363.21 454.7 551.41 485.38 368.21 342.91 334.6 344.5 328.81 321.21 338.8 554.87 627.02 491.97 338.25 508.13 508.2 478.78 619.45 639.48 508.13 398.68 602.66
193.04 215.89 111.93 91.25 57.24 45.44 258.36 68.61 42.36 67.05 115.91 219.84 297.29 210.45 289.43 148.58 178.74 123.66 133.77 128.33 137.92 275.89 315.8 257.96 183.68 208.77 218.81 247.15 289.2 311.41 266.08 233.19 263.66
35.56 38.5 20.61 15.9 16.05 15.71 39.05 14.75 13.79 15.96 21.28 37.79 36.95 45.57 8.05 25.45 15.88 27.4 23.28 23.23 24.61 47.95 47.27 41.59 24.76 28.96 30.52 21.64 32.56 33.25 22.1 18.17 29.94
19.33 15.7 22.71 12.63 16.41 13.47 46.06 8.8 8.53 4.64 14.44 30.06 24.24 35.47 25.57 22.81 20.15 21.82 16.87 14.87 16.09 34.34 44.82 35.45 19.05 24.95 26.43 24.04 28.82 26.07 23.47 19.28 29.21
4.61 6.08 1.75 1.02 0.95 1.89 12.75 2.76 2.37 2.04 1.17 8.26 10.1 5.45 0.96 0.97 4.42 0.81 0.92 0.81 0.92 5.82 6.57 1.51 4.26 5.19 6.24 1.05 10.02 10.32 2.31 0.42 7.68
2.86 3.09 1.0 0.57 0.59 0.89 6.94 0.65 0.6 0.56 0.28 2.75 6.31 4.61 0.14 0.0 2.34 0.15 0.12 0.11 0.41 6.43 4.5 5.96 1.7 3.1 3.17 1.07 6.04 5.22 1.68 0.21 4.03
9.04 12.65 5.16 4.07 5.3 3.84 19.46 3.51 2.6 2.55 13.12 22.11 26.7 24.62 14.44 12.91 7.01 6.29 8.2 9.73 8.91 26.14 21.16 25.77 8.91 21.13 18.69 16.67 25.37 23.4 15.33 14.08 20.06
37.9 34.38 25.52 16.52 21.92 15.65 39.65 24.94 22.33 27.69 41.9 49.87 73.06 45.76 31.14 38.49 36.4 41.95 27.84 25.01 27.62 67.37 69.07 75.76 48.85 54.05 57.74 49.59 60.91 64.71 52.66 44.31 60.61
12.92 12.48 12.04 13.11 11.45 14.3 11.41 11.48 11.65 18.75 10.28 15.33 14.29 19.39 11.85 9.5 12.27 9.02 10.41 11.12 8.33 17.41 13.58 18.4 9.52 13.49 15.31 18.17 21.75 24.02 21.98 16.52 24.54
16.56 12.38 7.23 4.09 4.27 5.68 21.75 1.82 2.13 1.2 3.62 24.23 4.3 40.22 2.57 6.18 3.52 3.84 4.13 3.1 3.44 27.42 10.31 9.99 6.6 21.41 14.88 10.1 5.32 5.98 4.84 11.73 13.83
60.95 69.42 48.07 48.86 38.89 62.91 76.52 40.72 33.62 39.72 52.4 63.64 104.02 72.09 66.03 53.7 60.41 50.64 55.47 56.73 61.03 92.62 115.94 103.88 64.3 76.09 73.33 71.36 101.91 95.0 79.45 68.0 99.86
9.74 9.36 6.04 6.24 4.5 6.33 8.06 6.07 5.71 6.4 7.7 9.1 10.6 10.15 6.73 8.55 7.55 10.81 4.56 7.28 7.78 10.63 10.05 4.47 8.42 9.1 10.42 11.03 13.14 13.06 11.55 9.63 14.01
29.96 28.92 22.99 17.65 22.55 22.79 41.13 25.04 19.64 15.78 27.17 45.5 51.14 39.95 30.25 26.13 24.8 25.16 23.42 25.48 24.41 43.65 40.99 43.73 39.57 25.27 26.36 34.49 49.08 44.15 35.9 30.52 39.86
10.29 19.11 3.45 3.65 3.06 6.9 31.68 3.59 4.32 3.74 6.13 18.14 10.21 16.56 25.64 12.7 9.26 8.74 6.55 6.25 8.79 18.45 22.48 24.74 12.3 16.03 15.58 22.84 27.08 21.55 26.05 22.6 22.73
13.81 17.99 7.41 4.63 4.78 4.24 17.04 6.15 3.02 3.94 6.51 12.92 16.04 15.84 3.6 7.22 7.28 5.73 5.97 6.04 6.96 22.28 21.09 18.16 10.53 13.84 14.2 12.87 24.25 21.27 15.51 10.55 18.36
25.27 31.76 11.81 10.9 8.74 10.45 43.56 6.78 9.29 12.77 21.6 33.13 39.94 39.98 26.6 21.39 22.76 23.03 19.95 24.24 26.96 36.13 53.6 49.53 27.81 39.62 35.23 34.04 44.2 37.26 36.92 28.26 45.92
7.56 8.11 4.52 4.17 6.2 5.96 9.29 5.35 5.4 5.17 6.18 8.76 13.14 9.91 4.52 7.15 6.61 8.59 5.1 6.45 5.53 10.56 12.32 10.73 6.67 8.83 8.51 9.39 17.25 14.97 9.5 7.72 13.25
23.64 23.86 14.88 9.26 8.37 11.3 40.76 9.13 5.95 14.53 20.76 27.67 38.81 40.31 47.55 33.14 21.41 24.8 25.56 29.03 28.65 34.19 45.27 64.77 27.12 34.72 33.93 32.59 39.99 39.83 33.36 25.73 43.04
16.36 12.18 16.0 11.78 8.78 6.26 30.72 6.44 5.22 5.4 7.58 17.19 18.13 21.52 15.86 14.39 10.46 13.03 9.4 12.6 13.71 24.11 21.6 39.74 11.52 16.64 17.88 17.31 27.39 25.04 19.07 14.23 21.84
11.55 10.28 10.25 7.51 12.7 6.93 21.46 9.2 6.62 5.96 8.07 14.2 13.36 8.73 14.39 10.06 14.31 7.73 6.3 6.54 6.73 20.52 24.42 18.86 12.43 13.68 13.89 15.72 21.65 18.8 15.72 12.87 23.34
10.63 13.48 12.08 11.89 9.77 11.3 26.58 7.2 6.49 9.72 13.04 21.58 27.44 21.28 14.85 11.24 19.15 10.94 11.49 13.77 12.17 30.36 33.39 21.7 17.82 19.36 19.32 19.15 30.0 31.0 19.06 19.23 33.41
3.93 4.09 1.61 0.92 1.22 1.69 6.84 0.93 1.99 0.91 1.27 3.77 5.61 4.37 1.3 1.85 3.02 1.72 0.99 1.33 1.08 7.13 9.63 4.47 5.04 3.33 3.52 2.62 4.58 4.36 3.51 2.53 4.33
17.14 22.89 6.53 4.35 4.68 8.87 23.55 7.07 10.79 4.25 13.42 15.9 20.07 16.7 10.33 11.87 9.87 12.02 6.18 8.0 7.42 16.53 6.83 10.67 23.53 20.93 18.91 32.19 22.85 25.94 35.13 31.97 37.54
24.51 27.48 22.03 22.99 21.51 24.02 33.15 15.07 12.67 13.05 18.53 29.46 24.36 30.6 17.54 19.27 22.89 17.33 18.63 16.33 19.01 34.27 29.0 17.39 25.94 27.55 28.61 28.19 33.29 35.97 27.99 28.17 42.2
27.22 35.27 24.63 26.8 25.05 29.01 35.84 27.76 23.36 32.39 21.71 34.04 33.79 33.55 16.6 17.87 24.17 21.52 23.33 21.46 25.3 39.18 38.59 35.05 19.86 30.92 33.09 35.18 55.06 55.13 41.82 30.15 55.16
38.87 47.79 24.99 28.41 33.76 44.55 57.39 38.99 48.0 28.78 45.06 52.81 56.59 53.46 24.75 44.31 31.05 57.71 47.71 50.91 55.29 57.79 81.56 42.22 42.18 47.47 51.13 55.07 78.4 82.0 57.82 46.66 76.32
15.12 16.61 12.24 12.62 12.57 16.25 19.73 15.53 13.7 14.84 8.79 18.88 15.77 26.64 6.58 7.58 12.26 8.69 9.12 12.13 9.87 18.87 20.96 18.38 10.61 14.63 16.1 18.92 26.05 24.5 16.97 13.95 26.42
14.86 12.58 13.01 11.08 9.86 8.63 21.91 8.19 6.37 3.75 2.61 11.75 16.87 9.72 9.92 3.43 11.52 3.81 2.47 3.53 2.96 23.71 21.46 52.83 14.62 16.54 17.05 20.25 16.13 15.08 20.64 22.03 18.37
10.71 7.85 7.58 5.01 7.7 6.15 15.88 6.41 6.15 4.61 5.05 10.89 22.19 8.23 9.73 5.3 12.44 2.7 5.78 5.98 4.34 15.37 14.46 15.38 17.79 15.41 13.18 13.25 13.56 12.94 12.21 13.75 12.21
71.91 57.25 78.11 65.31 66.43 43.97 146.94 30.07 22.32 20.37 42.19 65.67 134.25 68.29 49.72 42.03 64.48 42.41 48.04 40.8 46.31 97.26 109.62 135.51 73.88 81.41 76.98 104.41 107.84 97.99 99.52 85.98 90.14
150.84 108.62 76.44 51.21 55.35 52.24 116.0 59.09 60.25 36.55 68.3 96.02 155.0 98.58 75.83 60.69 99.39 79.48 73.56 60.26 71.77 123.3 191.16 175.74 120.44 111.33 107.01 89.47 97.83 89.37 88.82 75.65 98.05
7.22 10.06 3.72 3.27 2.67 5.61 17.15 1.78 1.49 1.92 1.29 6.88 7.61 3.96 5.57 1.99 4.27 1.54 0.66 0.85 0.69 15.65 11.64 4.77 5.56 5.78 7.27 18.67 11.3 12.38 14.75 11.74 15.59
18.52 23.35 14.86 16.63 18.07 24.07 18.68 21.5 15.74 17.24 13.56 25.5 27.73 26.44 18.12 15.23 20.49 15.46 17.85 12.09 14.65 21.95 29.82 36.42 16.73 22.49 21.37 32.6 37.73 45.31 41.41 31.37 39.39
4.54 5.43 1.65 1.14 1.57 0.64 5.22 0.76 1.1 1.82 4.8 7.09 9.89 7.68 9.11 5.01 5.09 3.69 6.44 6.16 4.22 16.01 14.04 23.49 4.38 11.44 10.78 12.97 14.66 11.77 9.77 10.11 10.81
24.04 31.39 11.45 8.43 9.81 11.33 28.94 9.28 11.57 9.06 20.47 21.87 42.33 27.28 14.13 18.55 16.76 16.62 12.99 14.69 15.82 28.86 43.92 51.0 17.18 31.05 28.24 29.31 35.78 34.93 26.72 21.6 38.5
47.96 61.4 31.88 26.01 28.08 36.03 49.79 33.17 36.73 29.3 65.39 50.82 81.77 61.81 39.65 68.03 33.05 66.58 59.81 59.11 60.8 63.2 90.75 127.08 40.16 60.84 58.47 72.23 92.48 84.2 74.62 51.67 74.92
6.12 5.19 4.66 4.63 4.54 2.64 7.65 3.93 2.16 1.73 2.8 4.66 7.97 2.98 3.89 4.11 4.25 4.55 2.61 2.61 5.12 5.13 6.44 16.73 5.51 4.51 5.22 7.76 6.78 7.18 6.78 5.73 7.45
770.25 725.78 317.91 193.65 160.23 144.37 1325.04 209.92 134.91 160.68 46.04 623.79 314.12 769.64 85.16 46.14 73.89 40.74 38.15 64.35 34.95 1141.62 1198.88 813.1 169.73 704.46 657.81 553.61 883.91 618.54 421.22 425.53 485.41

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)