Heatmap: Cluster_382 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Cambium and expanding xylem
Cambium
Expanding xylem
Expanding and mature xylem
Maturing xylem
Maturing xylem and dead early wood
Wood
Dead early and late wood
Dead early wood
Dead late wood
Vegetative shoots - needles
Vegetative shoots - stem
Vegetative shoots
Girdled twig - stem
Dried twig - needles
Girdled twig - needles
Needles
Needles - dawn
Needles - later afternoon
Needles - midday
Needles - night
Buds
Female flower
Male flower
Pineapple galls
Somatic germinants - abnormal type
Somatic germinants - normal type
Cell culture - H20 - 5 days
Cell culture - KI added - 5 days
Cell culture - KI added - 20 days
Cell culture - KI removed - 4 days
Cell culture - KI removed - 12 days
Cell culture - solid medium
0.1 0.01 -0.41 -0.76 -0.63 -0.78 0.54 -0.2 -0.67 -0.39 -0.15 -0.17 0.37 0.29 -0.45 -0.16 -0.15 -0.36 0.01 -0.24 -0.11 0.25 0.26 0.21 0.5 -0.3 -0.3 0.12 0.66 0.7 0.12 -0.29 0.54
0.68 0.23 0.35 0.28 -0.22 -1.29 1.61 -1.02 -1.7 -0.78 -0.72 0.65 0.42 -0.32 -0.93 -1.17 -0.01 -1.03 -0.98 -0.97 -0.88 0.51 0.65 -0.15 0.11 0.04 0.33 -0.76 0.57 0.61 -0.53 -0.76 0.63
-0.26 -0.41 -0.01 -0.3 -0.52 -0.28 0.69 -1.49 -1.5 -1.58 -0.05 -0.11 -0.13 0.43 -0.0 0.25 -0.3 0.01 -0.15 -0.76 -0.07 0.09 0.09 0.49 0.13 0.01 0.13 0.31 0.63 0.73 0.52 -0.02 0.29
0.18 0.52 -0.51 -1.27 -0.66 -0.3 -0.1 -0.69 -0.77 -1.28 -0.75 -0.56 0.79 -0.14 -1.38 -0.78 -0.51 -0.7 -0.86 -1.09 -1.03 0.08 0.82 1.76 -0.56 0.48 0.35 0.11 0.83 0.67 0.35 -0.19 0.56
0.2 0.06 -0.25 -0.28 -0.35 -0.85 0.29 -0.91 -1.17 -0.34 -0.02 0.16 0.39 0.12 -0.84 0.07 0.08 0.39 -0.09 -0.06 -0.15 0.19 0.22 -0.04 0.35 -0.05 0.03 0.08 0.35 0.41 0.06 -0.05 0.41
0.61 0.43 0.0 -0.5 -0.42 -0.45 0.94 -0.95 -0.8 -1.15 -0.92 0.23 0.21 -0.07 -0.31 -0.9 -0.45 -1.09 -1.35 -1.16 -1.25 0.55 0.85 0.32 -0.3 0.28 0.19 0.3 0.6 0.51 0.39 0.09 0.69
0.37 -0.02 -0.46 -0.8 -1.06 -0.73 1.15 -1.14 -1.48 -1.19 -1.59 0.61 -0.37 0.43 0.66 -1.37 -0.41 -1.3 -0.8 -2.02 -1.81 0.8 0.84 0.11 -0.63 0.11 -0.03 0.72 0.63 0.59 0.7 0.42 0.75
-0.15 0.26 -0.52 -0.4 -0.37 0.27 0.47 -1.19 -1.42 -1.58 -1.13 0.56 0.25 -0.02 -0.12 -0.43 -0.33 -1.5 -1.29 -1.42 -1.16 0.79 0.1 1.57 -0.08 0.14 0.2 0.09 0.62 0.73 0.25 0.06 0.42
0.61 -0.1 -0.06 -0.42 -0.33 -1.29 1.56 -1.85 -2.2 -1.87 -0.82 0.2 -0.18 -0.58 -1.11 -0.7 0.1 -0.93 -1.33 -1.63 -1.1 0.57 0.8 0.29 0.08 0.19 0.07 0.34 0.82 0.86 0.44 0.15 0.83
0.6 0.3 0.1 -0.42 -0.37 -0.63 0.44 -1.44 -1.43 -1.72 0.05 0.02 0.32 0.43 -0.14 -0.3 -0.25 -0.12 -0.56 -1.22 -0.64 0.37 1.01 -2.01 0.14 0.12 0.12 0.61 0.41 0.25 0.26 0.41 0.4
0.19 -0.22 0.01 -0.55 -0.55 -0.8 0.11 -0.99 -1.17 -1.15 0.09 0.22 0.64 0.32 -0.73 -0.14 -0.34 -0.15 -0.15 -0.11 -0.01 0.67 0.88 0.36 0.04 0.2 0.14 0.03 0.3 0.23 0.21 -0.22 0.11
0.06 0.14 -0.22 -0.29 -0.47 -0.42 0.4 -0.12 -0.49 -0.51 -0.63 0.18 0.45 0.29 -0.64 -0.24 -0.4 -0.59 -0.62 -0.57 -0.49 0.59 0.63 0.32 0.23 0.0 0.1 0.03 0.45 0.55 0.1 -0.01 0.33
0.08 0.08 -0.05 -0.17 -0.15 -0.54 0.19 -0.58 -0.55 -0.37 -0.23 -0.01 -0.34 -0.03 0.01 -0.14 0.35 0.07 -0.15 0.15 -0.25 -0.11 0.09 -0.42 -0.37 0.16 0.21 0.16 0.67 0.54 0.13 0.04 0.49
0.23 0.91 -1.57 -1.58 -1.59 -0.95 1.18 -1.75 -0.9 -1.43 -3.57 0.6 0.85 0.3 -4.0 -3.19 0.18 -5.93 -4.04 -4.78 -4.48 1.24 1.67 0.29 0.1 0.48 0.55 -0.72 0.96 1.29 -0.14 -0.7 0.73
0.18 0.02 0.04 -0.4 -0.35 -0.59 0.58 -0.64 -0.99 -0.85 -0.03 -0.07 0.06 0.08 0.0 -0.1 -0.04 0.42 -0.07 -0.27 -0.13 -0.13 -0.2 -0.25 -0.21 0.13 0.31 0.18 0.52 0.46 0.31 0.09 0.45
0.34 0.09 -0.26 -0.44 -0.32 -0.28 0.4 -0.78 -1.14 -1.17 -0.89 0.33 -0.15 0.48 -0.22 -0.82 -0.23 -0.28 -0.43 -0.49 -0.79 0.68 0.31 -0.86 0.03 0.05 0.01 0.69 0.44 0.87 0.52 0.12 0.73
-0.28 0.09 -0.96 -1.2 -1.22 -1.13 0.26 -0.87 -0.71 -1.0 -0.46 0.06 0.63 0.66 -0.35 -0.33 -0.31 -0.84 -0.78 -0.84 -0.69 0.73 1.06 0.85 -0.02 0.46 0.34 0.04 0.61 0.65 0.11 -0.28 0.69
0.25 0.23 -0.64 -1.21 -0.68 -0.23 -0.11 -0.77 -0.33 -0.09 -0.38 -0.02 -0.91 0.51 0.05 -0.23 -0.55 -1.07 -0.49 -0.36 -0.38 0.02 0.32 -0.92 -0.56 0.07 0.04 0.94 0.73 0.61 0.96 0.75 0.61
0.93 1.08 -0.31 -1.42 -2.21 -2.41 2.02 -1.66 -2.58 -0.46 -5.05 1.93 -0.31 0.77 -6.26 -5.08 -1.51 -5.36 -4.74 -4.03 -4.7 0.88 1.11 -1.24 -1.01 1.13 0.21 -0.19 1.05 0.06 0.41 -0.6 0.02
-0.99 -0.45 -2.13 -2.21 -3.73 -4.3 2.34 -3.66 -4.53 -1.26 -4.02 2.13 0.17 0.59 -3.57 -4.33 -1.14 -5.05 -5.27 -3.27 -5.19 0.8 0.6 -0.52 -0.59 1.05 0.18 0.2 1.56 0.58 0.86 0.17 0.5
-0.07 0.08 -1.14 -1.86 -0.9 -0.97 -0.33 -0.6 -0.4 -1.32 -0.33 -0.32 0.85 -0.08 -0.33 -0.69 -0.19 -0.47 -0.56 -0.62 -0.49 0.55 1.06 1.1 -0.09 0.27 0.27 0.17 0.76 0.8 0.36 -0.17 0.52
-0.07 -0.48 0.0 -0.51 -0.34 -0.72 0.82 -0.81 -1.22 -0.75 -0.43 0.23 0.08 0.45 -0.39 0.06 -0.22 -0.19 -0.06 -0.2 -0.19 0.39 0.51 0.33 0.16 0.01 -0.05 0.1 0.55 0.42 0.12 -0.08 0.38
0.34 0.15 -0.34 -1.23 -0.58 -0.62 1.56 -1.61 -1.45 -1.72 -2.49 0.53 0.92 1.11 -0.71 -2.07 -0.14 -2.03 -2.35 -2.02 -2.63 1.0 1.05 1.03 -0.75 0.18 0.41 -0.73 0.81 0.49 -0.47 -1.23 0.81
0.24 0.54 -0.5 -0.59 -0.76 -0.2 0.31 -0.83 -0.83 -0.78 -0.23 0.09 0.37 0.18 -0.22 -0.32 -0.35 -0.31 -0.38 -0.41 -0.34 0.38 0.55 0.2 -0.34 0.25 0.25 0.16 0.54 0.58 0.25 -0.1 0.5
0.04 0.2 -0.75 -1.04 -1.72 -2.05 0.46 -1.45 -2.15 -1.49 -0.7 0.23 0.66 0.16 0.62 -0.34 -0.07 -0.61 -0.49 -0.55 -0.45 0.55 0.75 0.46 -0.03 0.15 0.22 0.39 0.62 0.73 0.5 0.31 0.49
0.39 0.51 -0.39 -0.77 -0.76 -0.79 0.53 -0.88 -0.97 -0.76 -0.35 0.48 0.45 0.75 -1.75 -0.09 -0.77 0.02 -0.22 -0.22 -0.14 0.82 0.8 0.62 -0.13 0.1 0.17 -0.32 0.26 0.3 -0.29 -0.58 0.14
-0.23 -0.53 0.01 -0.84 -0.46 -0.75 1.03 -1.36 -1.41 -2.29 -0.65 0.41 0.1 0.65 0.18 0.01 -0.17 -0.05 -0.42 -0.61 -0.49 0.6 0.99 0.65 -0.25 0.14 0.22 0.09 0.35 0.2 0.05 -0.23 0.37
0.2 0.6 -1.19 -1.98 -2.07 -1.09 1.67 -0.54 -0.76 -0.98 -1.78 1.04 1.33 0.44 -2.06 -2.05 0.14 -2.31 -2.13 -2.31 -2.13 0.54 0.71 -1.41 0.09 0.37 0.64 -1.94 1.32 1.36 -0.8 -3.27 0.94
0.27 0.39 -1.24 -2.06 -2.01 -1.41 1.55 -1.86 -1.98 -2.07 -3.09 0.21 1.42 0.96 -4.04 - -0.02 -3.96 -4.33 -4.4 -2.52 1.44 0.93 1.33 -0.48 0.39 0.42 -1.15 1.35 1.14 -0.5 -3.48 0.77
-0.62 -0.14 -1.43 -1.77 -1.39 -1.86 0.48 -1.99 -2.42 -2.45 -0.08 0.67 0.94 0.82 0.05 -0.11 -0.99 -1.14 -0.76 -0.52 -0.64 0.91 0.61 0.89 -0.64 0.6 0.43 0.26 0.87 0.75 0.14 0.02 0.53
-0.17 -0.31 -0.74 -1.37 -0.96 -1.45 -0.11 -0.78 -0.94 -0.63 -0.03 0.22 0.77 0.1 -0.46 -0.15 -0.23 -0.03 -0.62 -0.77 -0.63 0.66 0.69 0.83 0.19 0.34 0.43 0.21 0.51 0.6 0.3 0.05 0.5
-0.16 -0.21 -0.26 -0.14 -0.33 -0.01 -0.34 -0.33 -0.31 0.38 -0.49 0.09 -0.01 0.43 -0.28 -0.6 -0.23 -0.68 -0.47 -0.38 -0.79 0.27 -0.09 0.35 -0.6 -0.1 0.09 0.33 0.59 0.74 0.61 0.2 0.77
0.78 0.36 -0.42 -1.24 -1.18 -0.76 1.17 -2.41 -2.18 -3.01 -1.42 1.33 -1.17 2.06 -1.91 -0.64 -1.46 -1.33 -1.22 -1.64 -1.49 1.51 0.1 0.05 -0.55 1.15 0.62 0.07 -0.86 -0.69 -1.0 0.28 0.52
-0.17 0.02 -0.51 -0.49 -0.81 -0.12 0.16 -0.75 -1.02 -0.78 -0.38 -0.1 0.6 0.08 -0.05 -0.35 -0.18 -0.43 -0.3 -0.27 -0.16 0.44 0.76 0.6 -0.09 0.15 0.1 0.06 0.57 0.47 0.22 -0.01 0.55
0.17 0.12 -0.51 -0.47 -0.94 -0.45 -0.1 -0.51 -0.6 -0.43 -0.16 0.08 0.3 0.23 -0.36 -0.01 -0.19 0.33 -0.92 -0.25 -0.15 0.3 0.22 -0.95 -0.04 0.08 0.27 0.35 0.61 0.6 0.42 0.16 0.7
-0.08 -0.13 -0.46 -0.84 -0.49 -0.47 0.38 -0.34 -0.69 -1.0 -0.22 0.53 0.69 0.34 -0.06 -0.28 -0.35 -0.33 -0.43 -0.31 -0.37 0.47 0.37 0.47 0.32 -0.32 -0.26 0.13 0.63 0.48 0.18 -0.05 0.33
-0.47 0.42 -2.05 -1.97 -2.22 -1.05 1.15 -1.99 -1.72 -1.93 -1.22 0.35 -0.48 0.21 0.84 -0.17 -0.63 -0.71 -1.12 -1.19 -0.7 0.37 0.65 0.79 -0.21 0.17 0.13 0.68 0.92 0.59 0.87 0.66 0.67
0.26 0.64 -0.64 -1.31 -1.27 -1.44 0.57 -0.91 -1.93 -1.55 -0.82 0.17 0.48 0.46 -1.68 -0.67 -0.66 -1.01 -0.95 -0.93 -0.73 0.95 0.87 0.66 -0.13 0.27 0.3 0.16 1.07 0.89 0.43 -0.13 0.67
-0.17 0.16 -1.27 -1.38 -1.7 -1.45 0.61 -2.07 -1.62 -1.16 -0.4 0.22 0.49 0.49 -0.1 -0.41 -0.32 -0.31 -0.51 -0.23 -0.08 0.34 0.91 0.8 -0.03 0.48 0.31 0.26 0.63 0.39 0.37 -0.01 0.69
-0.13 -0.03 -0.87 -0.99 -0.42 -0.48 0.16 -0.63 -0.62 -0.68 -0.42 0.08 0.67 0.26 -0.87 -0.21 -0.32 0.05 -0.7 -0.36 -0.58 0.35 0.57 0.37 -0.31 0.09 0.04 0.18 1.06 0.85 0.2 -0.1 0.68
-0.29 -0.28 -0.96 -1.64 -1.79 -1.36 0.5 -1.66 -2.28 -0.99 -0.48 -0.06 0.43 0.48 0.72 0.2 -0.43 -0.22 -0.18 0.01 -0.01 0.24 0.65 1.16 -0.09 0.26 0.23 0.17 0.47 0.46 0.21 -0.17 0.57
0.03 -0.4 -0.0 -0.45 -0.87 -1.36 0.94 -1.32 -1.62 -1.57 -1.08 0.1 0.18 0.42 -0.02 -0.16 -0.62 -0.3 -0.77 -0.35 -0.23 0.59 0.43 1.31 -0.48 0.05 0.16 0.11 0.77 0.64 0.25 -0.17 0.45
-0.16 -0.32 -0.33 -0.78 -0.02 -0.89 0.74 -0.48 -0.96 -1.11 -0.67 0.14 0.05 -0.56 0.16 -0.36 0.15 -0.74 -1.03 -0.98 -0.94 0.67 0.92 0.55 -0.05 0.09 0.11 0.29 0.75 0.55 0.29 -0.0 0.86
-0.75 -0.41 -0.57 -0.59 -0.87 -0.66 0.57 -1.31 -1.46 -0.88 -0.46 0.27 0.62 0.25 -0.27 -0.67 0.1 -0.71 -0.64 -0.38 -0.55 0.76 0.9 0.28 -0.0 0.12 0.11 0.1 0.75 0.79 0.09 0.11 0.9
0.3 0.36 -0.99 -1.8 -1.38 -0.92 1.1 -1.78 -0.69 -1.81 -1.33 0.24 0.81 0.45 -1.3 -0.79 -0.08 -0.9 -1.7 -1.27 -1.57 1.16 1.59 0.48 0.66 0.06 0.14 -0.29 0.52 0.45 0.14 -0.34 0.44
0.11 0.52 -1.28 -1.87 -1.77 -0.84 0.57 -1.17 -0.56 -1.91 -0.24 -0.0 0.34 0.07 -0.62 -0.42 -0.69 -0.4 -1.36 -0.99 -1.1 0.06 -1.22 -0.58 0.56 0.4 0.25 1.02 0.52 0.71 1.14 1.01 1.24
-0.0 0.16 -0.15 -0.09 -0.19 -0.03 0.44 -0.7 -0.95 -0.91 -0.4 0.27 -0.01 0.32 -0.48 -0.35 -0.1 -0.5 -0.4 -0.59 -0.37 0.48 0.24 -0.5 0.08 0.17 0.22 0.2 0.44 0.55 0.19 0.2 0.78
-0.2 0.18 -0.34 -0.22 -0.32 -0.11 0.2 -0.17 -0.42 0.05 -0.52 0.13 0.11 0.1 -0.91 -0.8 -0.37 -0.54 -0.42 -0.54 -0.3 0.33 0.31 0.17 -0.65 -0.01 0.08 0.17 0.82 0.82 0.42 -0.05 0.82
-0.35 -0.05 -0.98 -0.8 -0.55 -0.15 0.22 -0.34 -0.04 -0.78 -0.13 0.1 0.2 0.11 -1.0 -0.16 -0.67 0.22 -0.05 0.04 0.16 0.23 0.72 -0.23 -0.23 -0.06 0.05 0.16 0.67 0.73 0.23 -0.08 0.63
-0.04 0.1 -0.34 -0.3 -0.3 0.07 0.35 0.0 -0.18 -0.06 -0.82 0.28 0.02 0.78 -1.24 -1.03 -0.34 -0.84 -0.77 -0.35 -0.65 0.28 0.43 0.24 -0.55 -0.08 0.05 0.29 0.75 0.66 0.13 -0.15 0.77
0.13 -0.11 -0.06 -0.29 -0.46 -0.65 0.69 -0.73 -1.09 -1.85 -2.38 -0.21 0.31 -0.48 -0.45 -1.98 -0.24 -1.83 -2.46 -1.94 -2.19 0.81 0.66 1.96 0.11 0.29 0.33 0.58 0.25 0.15 0.61 0.7 0.44
0.06 -0.39 -0.44 -1.04 -0.42 -0.75 0.62 -0.69 -0.74 -1.16 -1.03 0.08 1.11 -0.32 -0.08 -0.96 0.27 -1.93 -0.83 -0.79 -1.25 0.58 0.49 0.58 0.79 0.58 0.35 0.36 0.4 0.33 0.24 0.42 0.24
-0.02 -0.35 0.1 -0.16 -0.14 -0.73 1.01 -1.28 -1.71 -1.84 -0.79 -0.15 0.88 -0.1 -0.55 -0.8 -0.18 -0.78 -0.6 -0.84 -0.66 0.41 0.59 0.89 0.02 0.16 0.08 0.52 0.56 0.43 0.45 0.24 0.31
0.7 0.22 -0.29 -0.86 -0.75 -0.83 0.32 -0.66 -0.63 -1.35 -0.45 0.04 0.73 0.08 -0.3 -0.62 0.09 -0.23 -0.34 -0.63 -0.38 0.4 1.04 0.92 0.37 0.26 0.2 -0.06 0.07 -0.06 -0.07 -0.3 0.07
0.08 0.56 -0.88 -1.06 -1.35 -0.28 1.33 -1.94 -2.19 -1.83 -2.4 0.01 0.16 -0.79 -0.29 -1.78 -0.68 -2.15 -3.38 -3.0 -3.31 1.2 0.77 -0.52 -0.3 -0.24 0.09 1.45 0.73 0.86 1.11 0.78 1.19
-0.34 -0.0 -0.66 -0.49 -0.37 0.04 -0.32 -0.12 -0.57 -0.44 -0.79 0.12 0.24 0.18 -0.37 -0.62 -0.19 -0.6 -0.39 -0.95 -0.68 -0.09 0.35 0.64 -0.48 -0.06 -0.13 0.48 0.69 0.95 0.82 0.42 0.75
-0.7 -0.44 -2.16 -2.69 -2.23 -3.53 -0.5 -3.28 -2.74 -2.02 -0.62 -0.06 0.42 0.06 0.3 -0.56 -0.54 -1.0 -0.2 -0.26 -0.8 1.12 0.93 1.67 -0.75 0.63 0.55 0.82 0.99 0.67 0.41 0.46 0.55
0.05 0.44 -1.02 -1.46 -1.24 -1.03 0.32 -1.32 -1.0 -1.35 -0.18 -0.08 0.87 0.24 -0.71 -0.32 -0.47 -0.48 -0.83 -0.66 -0.55 0.32 0.92 1.14 -0.43 0.42 0.29 0.34 0.63 0.59 0.21 -0.1 0.73
-0.28 0.08 -0.87 -1.16 -1.05 -0.69 -0.22 -0.81 -0.66 -0.99 0.17 -0.19 0.49 0.09 -0.55 0.23 -0.81 0.2 0.04 0.02 0.07 0.12 0.64 1.13 -0.53 0.07 0.01 0.31 0.67 0.53 0.36 -0.17 0.37
0.22 -0.02 -0.18 -0.19 -0.22 -1.0 0.54 -0.43 -1.29 -1.61 -0.91 -0.18 0.6 -0.83 -0.44 -0.36 -0.31 -0.21 -1.02 -1.02 -0.04 -0.04 0.29 1.67 0.06 -0.23 -0.02 0.56 0.36 0.45 0.36 0.12 0.5
0.82 0.74 -0.45 -1.17 -1.44 -1.59 1.61 -1.05 -1.69 -1.44 -3.24 0.52 -0.47 0.82 -2.35 -3.24 -2.56 -3.42 -3.51 -2.76 -3.64 1.39 1.46 0.9 -1.36 0.7 0.6 0.35 1.02 0.51 -0.05 -0.03 0.16

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.