Heatmap: Cluster_425 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Cambium and expanding xylem
Cambium
Expanding xylem
Expanding and mature xylem
Maturing xylem
Maturing xylem and dead early wood
Wood
Dead early and late wood
Dead early wood
Dead late wood
Vegetative shoots - needles
Vegetative shoots - stem
Vegetative shoots
Girdled twig - stem
Dried twig - needles
Girdled twig - needles
Needles
Needles - dawn
Needles - later afternoon
Needles - midday
Needles - night
Buds
Female flower
Male flower
Pineapple galls
Somatic germinants - abnormal type
Somatic germinants - normal type
Cell culture - H20 - 5 days
Cell culture - KI added - 5 days
Cell culture - KI added - 20 days
Cell culture - KI removed - 4 days
Cell culture - KI removed - 12 days
Cell culture - solid medium
-0.3 -0.29 -0.53 -1.48 -0.87 -1.19 0.05 -0.93 -0.89 -0.66 0.04 0.12 1.16 -0.01 -0.06 -0.02 -0.59 -0.69 0.13 -0.5 -0.23 0.64 0.79 1.48 -0.32 -0.36 -0.44 -0.02 0.5 0.5 0.15 -0.28 0.31
-2.21 -3.13 -3.15 -3.74 -2.89 -3.8 0.01 -3.64 -3.93 -2.96 0.34 0.42 1.91 0.87 -0.32 -0.25 0.06 -0.36 0.06 -0.3 0.01 1.11 1.24 1.63 -0.27 -0.72 -0.61 0.33 0.33 0.31 0.12 -0.18 0.09
-3.43 -4.13 -3.83 -4.45 -3.72 -2.74 0.03 -2.08 -3.0 -3.65 0.08 0.47 1.21 0.19 -0.34 0.75 0.05 -0.44 0.43 0.22 0.25 0.85 1.11 1.15 -0.09 0.18 0.17 0.22 0.46 0.58 0.29 0.03 0.62
-0.26 -0.14 -0.86 -1.17 -0.85 -2.0 0.54 -0.98 -0.88 -1.43 -0.31 -0.05 1.45 -0.56 -0.19 0.45 -0.12 -0.14 -0.12 -0.23 -0.05 0.77 0.93 1.53 0.11 0.31 0.18 -0.66 -0.12 0.09 -0.6 -0.95 -0.22
-3.2 -3.12 -3.63 -4.29 -3.93 -5.04 0.73 -4.74 -5.44 -4.83 -0.69 0.5 1.69 0.73 0.27 0.43 -0.49 -0.53 -0.08 -0.2 -0.36 1.12 1.36 1.86 0.36 -0.63 -0.81 -0.04 0.25 0.3 -0.05 -0.05 0.15
-1.62 -1.57 -2.07 -2.22 -2.0 -2.07 0.35 -1.82 -1.75 -2.67 -0.14 -0.06 1.2 0.51 -0.25 0.57 0.07 -0.1 0.08 -0.12 0.01 0.46 0.93 0.91 0.04 -0.21 -0.2 0.4 0.81 0.72 0.32 -0.0 0.7
-1.89 -2.55 -3.01 -3.45 -2.88 -3.72 0.44 -4.01 -3.48 -4.12 0.08 0.39 1.28 0.26 0.4 0.69 0.12 -1.25 -0.0 -0.56 -0.3 0.7 0.99 2.17 0.37 0.15 0.19 -0.15 0.09 0.07 0.06 -0.2 0.1
-0.54 -0.55 -1.16 -1.33 -1.12 -0.63 0.74 -1.26 -1.43 -1.46 -0.2 0.29 0.49 0.64 -0.71 0.55 -0.06 -0.06 -0.03 0.3 -0.21 0.53 0.76 1.15 0.31 -0.19 -0.27 -0.12 0.38 0.2 -0.03 -0.36 0.39
-2.24 -2.21 -2.57 -3.13 -3.46 -3.89 1.38 -5.16 -5.61 -4.91 -0.53 0.53 1.29 0.41 -0.45 0.1 -0.25 -0.42 -0.09 -0.11 -0.13 0.97 1.27 1.13 0.38 0.32 0.23 0.37 0.32 0.25 0.16 0.07 0.24
- - -5.55 - - -4.2 0.55 -3.52 -3.91 -4.42 0.87 0.38 1.46 0.82 0.19 0.91 0.51 -1.16 0.95 0.15 0.76 0.47 0.77 2.26 0.56 -0.09 0.09 -1.85 -0.83 -1.43 -1.76 -0.72 -1.0
-3.02 -3.31 -3.89 -4.11 -3.32 -3.21 0.77 -3.65 -3.63 -3.77 0.01 0.74 0.39 0.77 0.94 0.49 -0.24 -0.01 -0.42 0.09 -0.09 0.56 1.06 0.87 -0.05 0.21 0.16 0.59 0.64 0.35 0.5 0.36 0.32
-3.18 -2.97 -3.19 -5.5 -6.35 - -0.09 -4.83 - - 0.08 0.31 1.52 0.9 0.21 0.46 -0.08 -0.13 -0.09 -0.33 -0.0 1.19 1.53 1.67 -0.22 -0.71 -0.73 0.06 0.32 0.18 0.24 -0.04 0.6
-3.53 -4.0 -4.36 -4.9 -5.18 -6.7 0.36 -8.38 -7.94 -6.22 -0.03 0.74 1.27 0.95 -0.12 0.71 -0.21 -0.11 0.2 -0.23 0.13 0.81 0.73 1.65 -0.29 0.0 0.11 0.27 0.5 0.42 0.11 -0.0 0.6
-4.12 -3.75 -4.78 -4.4 -5.16 -5.51 0.3 -5.46 -6.03 -5.53 -0.02 0.67 1.47 1.02 -0.16 0.67 0.04 0.01 0.06 0.04 -0.09 1.09 1.43 1.29 0.09 -0.14 -0.09 -0.15 0.19 0.35 -0.15 -0.39 0.49
-2.09 -2.26 -2.81 -3.71 -3.0 -2.87 0.21 -3.61 -3.07 -3.17 0.4 0.4 1.01 0.75 0.28 0.92 -0.17 0.29 0.42 0.33 0.41 0.46 1.11 1.74 -0.4 0.18 0.09 -0.38 0.01 0.06 -0.4 -0.63 0.14
-2.61 -2.89 -2.48 -2.45 -2.9 -4.71 0.79 -4.3 -4.56 -4.25 -0.46 0.45 0.6 0.54 1.04 0.61 -0.84 -0.51 -0.01 0.1 -0.2 1.02 1.65 1.61 -0.07 0.17 -0.08 0.28 0.01 -0.14 0.22 -0.11 -0.06
-8.54 -7.73 -8.93 - -9.11 - 0.52 -6.66 -7.81 - -0.2 0.79 1.65 0.84 -0.25 0.44 -0.21 -1.13 0.47 0.19 0.29 1.31 1.3 1.29 0.2 -0.43 -0.38 -0.18 0.3 0.35 0.06 -0.26 0.54
-2.95 -2.91 -3.74 -5.68 -4.11 -3.9 0.88 -6.16 -6.47 -3.36 -0.08 0.55 0.57 0.46 -0.03 1.02 -0.15 -0.58 0.44 0.14 -0.1 0.74 1.2 0.76 0.04 -0.17 0.12 0.0 0.61 0.87 0.18 0.32 0.94
-3.04 -3.39 -5.07 -4.39 -3.81 -3.82 0.06 -4.19 -4.98 -3.9 0.25 1.05 0.2 1.43 -0.14 0.76 0.14 0.21 0.52 0.57 0.61 0.6 1.23 1.43 -0.23 0.1 0.26 -0.42 0.13 0.1 -0.53 -0.7 0.09
-0.35 -0.39 -0.43 -0.84 -1.01 -1.5 0.92 -1.52 -1.92 -1.58 -0.38 0.04 0.58 0.17 0.67 0.18 -0.11 -0.05 -0.1 -0.21 -0.22 0.53 0.99 0.98 0.19 -0.07 -0.09 -0.11 0.36 0.26 0.02 -0.31 0.16
-3.86 -3.8 -4.25 -4.47 -4.04 -5.19 0.66 -5.52 -6.36 -3.9 0.15 0.73 1.33 0.71 -0.46 0.48 0.08 -0.42 0.49 0.43 0.23 1.12 1.22 1.28 0.52 -0.81 -0.74 -0.33 0.53 0.43 -0.12 -0.18 0.35
-4.77 -5.2 -4.89 -6.12 -6.09 -7.11 0.65 - -5.8 -6.01 -0.27 0.99 0.59 1.07 0.18 0.2 -0.6 0.11 0.01 0.28 0.23 0.72 1.39 1.49 -0.48 0.3 0.1 0.18 0.63 0.3 0.24 0.07 0.26
-1.61 -1.83 -2.22 -2.54 -2.51 -2.76 0.14 -3.33 -3.29 -2.92 -0.05 0.53 1.21 0.82 -0.36 0.1 0.22 -0.32 -0.08 -0.06 -0.28 0.91 1.18 1.09 -0.03 -0.04 0.03 0.3 0.56 0.53 0.2 0.22 0.61
-2.93 -3.97 -3.71 -6.2 -4.67 - 0.36 - -4.74 - 0.63 0.51 1.61 0.94 -0.07 1.34 -0.3 -0.81 0.01 0.21 -0.09 1.02 1.49 1.71 0.32 -0.66 -0.86 -0.54 -0.24 -0.2 -0.81 -0.54 0.33
-6.37 -3.82 -5.49 -4.93 -6.0 -6.46 -0.3 - -7.7 -6.73 0.89 0.8 1.11 0.86 -0.33 1.14 -0.37 0.66 0.78 0.74 0.86 0.67 1.1 0.71 0.06 -0.31 -0.17 -0.59 -0.11 0.13 0.12 -0.31 0.26
-2.15 -2.53 -4.05 -4.19 -4.22 -4.43 0.51 -4.05 -5.33 -4.78 0.06 0.05 1.69 -0.07 0.44 0.24 -0.04 -0.42 -0.4 -0.19 -0.5 1.13 1.34 2.12 0.23 0.29 0.16 -0.13 -0.02 -0.02 -0.42 -0.51 0.07
-3.53 -3.16 -4.78 -5.51 -5.1 -4.78 0.8 -6.13 -5.86 -4.99 -0.43 0.84 1.26 0.81 -0.15 0.05 -1.0 -0.84 -0.65 -0.48 -0.99 1.21 1.3 2.48 0.26 -0.35 -0.45 -0.43 0.43 0.53 -0.53 -0.7 0.49
-1.19 -1.15 -1.64 -1.68 -1.4 -1.58 0.66 -1.17 -1.8 -1.64 0.06 0.18 1.71 0.14 -0.66 0.23 -0.11 -0.29 -0.16 -0.19 -0.14 0.93 0.86 1.79 0.53 -0.24 -0.25 -0.22 -0.01 0.01 -0.29 -0.72 -0.41
-5.37 -5.11 -7.22 -6.96 -7.19 -8.41 0.48 -10.12 -8.61 - -0.62 0.56 1.51 0.63 0.13 -0.02 0.27 -0.72 -0.02 0.05 -0.01 0.73 1.35 1.54 -0.09 -0.03 -0.15 0.36 0.58 0.59 0.44 0.07 0.55
-0.44 -0.34 -1.53 -1.92 -1.92 -1.85 0.15 -1.33 -1.33 -1.36 -0.39 0.16 0.88 0.41 -0.06 -0.5 -0.61 -0.74 -0.82 -0.27 -0.8 1.14 1.57 1.23 -0.07 -0.32 -0.4 0.26 0.64 0.65 0.25 -0.15 0.72
-0.69 -1.15 -1.5 -2.05 -1.42 -2.6 0.81 -1.74 -1.8 -2.12 -0.54 0.44 0.95 0.29 -0.15 -0.41 -0.27 -0.8 -0.78 -1.11 -0.89 0.64 1.08 1.9 -0.39 0.23 0.31 0.16 0.67 0.56 0.41 -0.13 0.49
-3.01 -2.88 -3.25 -3.54 -4.06 -4.18 0.79 -4.61 -4.51 -3.33 0.26 0.68 0.73 0.35 -0.85 0.99 -0.4 0.1 0.49 0.46 0.51 1.5 1.61 0.4 0.44 0.27 -0.01 0.01 -0.08 -0.21 -0.16 -0.27 -0.09
-5.72 -8.16 -7.62 -6.42 -6.45 - 0.61 -7.21 -7.77 - 0.05 0.55 1.34 0.97 0.79 0.69 -0.26 -0.22 0.09 0.27 0.51 1.4 1.37 0.79 -0.19 0.2 0.34 -0.63 0.17 0.29 -0.19 -0.87 0.06
-1.58 -1.59 -3.2 -5.23 -3.22 -2.67 0.2 -3.05 -3.29 -3.91 0.04 0.38 1.68 0.28 -0.19 -0.03 0.11 -0.74 -0.24 -0.05 -0.17 1.23 0.84 1.65 0.74 0.18 0.2 -0.21 0.36 0.46 -0.1 -0.43 0.11
-0.59 -1.27 -0.51 -1.28 -1.01 -2.39 0.79 -0.76 -1.19 -2.17 -0.42 0.1 1.38 0.11 0.1 0.21 -0.42 -0.27 -0.05 -0.36 -0.16 0.35 0.64 1.31 0.69 -0.36 -0.53 0.16 0.28 0.19 0.15 0.18 0.09
-2.1 -2.04 -3.05 -3.35 -3.52 -3.46 0.25 -3.89 -3.32 -3.46 -0.11 0.58 1.22 0.7 -0.54 0.03 -0.39 0.5 0.45 0.36 0.33 0.8 1.09 0.83 0.1 0.02 0.04 0.09 0.62 0.61 0.19 -0.05 0.6
-4.92 -4.22 -4.44 -4.78 -6.17 -4.82 -0.03 - - -7.69 -0.44 -0.21 1.59 0.79 0.4 0.47 0.26 -0.58 -0.16 -0.53 -0.36 0.76 1.22 2.04 -0.14 -0.45 -0.51 0.22 0.63 0.69 0.49 0.07 0.31
-0.79 -0.59 -1.21 -1.49 -1.92 -1.85 0.47 -1.49 -1.43 -1.35 -0.37 0.32 0.97 0.48 0.09 -0.32 -0.08 -0.55 -0.39 -0.26 -0.37 0.78 1.12 1.04 -0.06 0.12 0.02 0.13 0.51 0.64 0.21 -0.02 0.54
-2.95 -3.21 -4.14 -4.32 -3.71 -5.74 0.38 -4.15 -3.83 -4.08 -0.12 0.96 1.19 0.54 -0.07 0.54 0.13 -0.17 0.22 0.06 0.01 1.05 1.37 0.51 0.2 0.03 -0.01 0.02 0.55 0.61 0.27 -0.12 0.59
-2.28 -1.39 -3.51 -3.7 -3.23 -2.68 0.53 -3.44 -2.77 -3.34 0.09 0.18 1.33 0.74 0.15 0.1 -0.31 0.01 -0.34 -0.47 -0.35 0.47 1.1 1.68 -0.29 -0.22 -0.13 -0.08 0.86 0.99 -0.09 -0.41 0.83
-2.3 -2.29 -2.94 -3.37 -3.37 -4.04 0.58 -4.15 -4.97 -4.15 -0.59 0.44 1.55 0.28 -0.44 0.28 0.03 -0.22 -0.15 -0.15 -0.36 1.23 1.54 1.75 0.33 -0.28 -0.29 -0.05 0.2 0.31 0.02 -0.08 0.2
-3.82 -3.46 -4.45 -4.18 -3.69 -5.29 0.74 -4.51 -4.81 -3.68 0.05 0.72 0.94 0.26 0.22 0.23 0.23 -0.46 0.29 0.19 0.11 0.88 0.71 1.64 0.18 -0.21 -0.16 0.1 0.72 0.77 0.36 -0.02 0.23
-4.28 -4.08 -6.81 -6.45 -6.76 -6.24 1.14 -9.58 -5.91 -7.19 -0.49 1.17 0.9 0.69 0.18 -0.06 -0.6 -1.54 -0.39 -1.07 -0.88 1.34 1.82 1.81 0.55 0.52 0.44 -0.39 0.19 0.26 -0.45 -0.9 0.16
-2.61 -2.53 -2.29 -2.18 -2.22 -2.3 0.37 -3.64 -3.42 -3.21 -0.13 0.5 1.1 0.89 -0.11 0.96 0.27 -0.07 -0.12 0.25 -0.01 1.06 0.97 0.62 0.09 -0.3 -0.17 -0.1 0.5 0.65 0.04 -0.0 0.6
-3.44 -2.57 -5.23 -5.01 -5.02 -4.74 0.59 -4.26 -4.78 -4.09 0.98 0.54 0.69 0.72 -0.42 1.1 -0.22 1.04 0.58 0.56 0.57 0.44 0.11 -0.17 0.68 0.17 0.35 -0.71 0.34 0.68 -0.12 -0.18 0.49
-2.36 -2.78 -2.61 -3.45 -3.09 -3.2 0.47 -3.5 -4.7 -1.81 -0.16 0.7 1.54 0.79 0.69 0.35 -0.18 0.12 0.18 -0.09 0.41 0.86 0.54 1.25 -0.1 0.14 0.23 -0.15 0.39 0.2 -0.17 -0.6 0.28
-6.36 -5.35 -6.37 -8.68 -6.21 -8.03 0.66 -6.75 -8.39 -5.33 -0.67 0.81 1.65 0.6 -0.11 0.51 0.16 -0.78 0.2 0.15 0.14 1.04 1.33 1.21 0.35 -0.51 -0.28 -0.01 0.53 0.71 -0.06 -0.35 0.45
-2.0 -3.08 -2.35 -2.97 -2.28 -3.98 0.94 -3.39 -2.44 -3.44 -0.96 0.85 0.13 0.99 0.92 0.27 -0.08 -0.24 -0.7 -0.13 -0.35 0.95 0.75 0.99 0.01 0.29 0.05 0.44 0.6 0.4 0.39 0.4 0.54
-6.97 -6.05 -5.77 -6.46 -6.97 - 0.22 - - -5.62 -0.02 0.8 1.93 1.36 0.21 0.69 0.37 -0.5 -0.22 -0.06 0.15 1.07 0.61 0.18 0.17 0.14 0.43 -0.39 0.23 0.67 -0.14 -0.65 0.63
-1.02 -1.56 -1.32 -2.21 -1.17 -1.84 0.21 -1.1 -1.17 -2.16 -0.06 0.25 1.24 0.5 0.0 0.34 -0.42 -0.08 0.05 -0.03 -0.13 1.12 1.37 1.22 0.09 -0.58 -0.72 -0.1 0.3 0.35 -0.18 -0.31 0.2
-6.58 -4.89 -6.61 -6.59 -6.56 -6.06 0.7 - - -7.47 -0.59 0.7 0.75 0.91 -0.14 0.25 -0.43 -0.67 0.2 0.24 0.36 1.22 1.41 1.62 -0.47 0.15 0.06 0.16 0.36 0.35 -0.29 0.08 0.91
-2.13 -2.96 -3.75 -3.71 -3.75 -5.05 0.08 -3.35 -3.01 -5.06 0.07 -0.56 1.84 0.33 -0.01 0.96 0.08 -0.47 0.49 0.62 0.4 0.54 1.03 2.08 -0.16 -0.13 0.2 -0.86 -0.15 0.35 -0.58 -0.85 -0.14
-3.39 -4.09 -4.34 -5.46 -4.71 -4.69 0.6 -4.17 -4.8 -4.69 0.06 0.82 1.07 0.98 -0.14 0.85 -0.4 0.2 0.46 0.29 0.38 0.78 0.83 1.0 -0.18 -0.12 0.1 0.11 0.57 0.33 0.08 -0.09 0.55
-1.21 -0.85 -2.22 -2.6 -2.92 -2.62 0.34 -2.46 -2.66 -1.65 -0.15 0.29 0.66 -0.64 0.08 0.46 0.09 1.0 0.39 0.72 0.57 0.47 1.11 0.85 -0.46 0.48 0.38 -0.05 0.33 0.38 -0.2 -0.2 0.14
-1.99 -1.07 -2.87 -2.39 -2.54 -2.16 0.27 -2.52 -2.67 -1.91 0.02 -0.01 1.18 0.16 -0.48 0.13 0.15 0.02 0.13 -0.2 0.2 0.52 1.19 1.63 0.08 0.29 0.31 -0.17 0.5 0.63 -0.09 -0.24 0.38
-0.64 -1.11 -0.8 -1.13 -1.08 -1.42 0.21 -1.17 -1.62 -0.87 -0.61 -0.25 1.2 -0.55 -0.35 -0.55 0.05 -0.85 -0.67 -0.7 -0.8 0.72 0.94 1.32 0.1 0.23 0.29 0.1 0.83 0.77 0.34 0.19 0.76
-2.47 -4.27 -5.74 -4.52 -5.01 -3.0 0.42 -5.03 -5.03 -3.66 0.44 0.81 0.89 1.21 0.13 0.64 -0.21 -0.47 0.29 0.04 0.52 0.91 1.06 1.83 -0.38 -0.06 -0.12 -0.33 -0.04 0.34 -0.34 -0.47 0.21
-0.21 -0.17 -0.67 -1.4 -1.01 -1.25 0.6 -0.62 -0.88 -1.88 0.07 0.39 0.93 0.09 0.26 -0.47 -0.76 -0.17 0.14 0.13 0.23 0.78 1.13 0.57 0.38 -0.37 -0.34 -0.05 0.01 0.18 -0.12 -0.4 0.27
-3.09 -2.83 -4.6 -6.77 -4.23 -4.56 0.08 -5.24 -4.27 -4.22 -0.72 -0.04 1.2 0.41 -0.25 -1.17 -0.08 0.38 -0.34 -0.49 -0.26 0.92 0.99 2.03 -0.38 0.18 0.16 0.34 0.9 0.89 0.6 0.09 0.81
-1.64 -1.82 -2.18 -2.15 -1.93 -2.26 0.74 -1.41 -1.25 -2.57 0.06 0.65 1.07 0.44 -0.97 0.0 -0.12 0.03 -0.06 0.04 0.07 1.02 0.91 0.96 0.51 0.12 0.07 -0.12 0.46 0.47 -0.0 -0.24 0.44
-3.14 -4.28 -7.51 -7.09 -7.22 - -0.13 -4.13 - -5.38 0.95 0.91 0.6 1.02 -0.11 1.47 -0.28 0.13 0.99 0.72 0.78 0.68 1.06 0.15 0.3 -0.0 0.31 -0.52 -0.21 0.07 -0.03 -0.72 0.03
-3.34 -3.59 -2.69 -4.06 -4.65 -4.96 0.66 -6.62 -3.96 - -0.23 0.67 1.86 1.07 -0.04 0.02 0.09 -1.41 0.34 0.35 0.1 1.29 0.87 1.77 -0.52 -0.71 -0.6 -0.42 0.12 0.17 0.06 -0.78 0.52

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.