Heatmap: Cluster_406 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Cambium and expanding xylem
Cambium
Expanding xylem
Expanding and mature xylem
Maturing xylem
Maturing xylem and dead early wood
Wood
Dead early and late wood
Dead early wood
Dead late wood
Vegetative shoots - needles
Vegetative shoots - stem
Vegetative shoots
Girdled twig - stem
Dried twig - needles
Girdled twig - needles
Needles
Needles - dawn
Needles - later afternoon
Needles - midday
Needles - night
Buds
Female flower
Male flower
Pineapple galls
Somatic germinants - abnormal type
Somatic germinants - normal type
Cell culture - H20 - 5 days
Cell culture - KI added - 5 days
Cell culture - KI added - 20 days
Cell culture - KI removed - 4 days
Cell culture - KI removed - 12 days
Cell culture - solid medium
-0.15 0.16 0.07 0.32 0.37 0.86 0.78 1.57 1.8 1.75 -0.18 -0.53 -0.14 -0.55 -1.0 -0.64 0.33 -1.79 -2.66 -1.57 -2.26 0.19 -0.67 -2.45 0.81 -0.75 -0.29 -2.46 -1.26 -0.15 -2.81 -3.02 -0.74
0.37 -0.09 -0.11 -0.45 -0.45 -0.4 0.23 0.89 0.69 0.06 -0.72 0.43 -0.24 0.47 -1.02 -0.66 -0.0 -0.46 -0.88 -0.86 -0.63 0.34 -0.12 -1.79 -0.14 -0.14 0.11 0.07 0.52 0.71 0.11 -0.03 0.67
0.22 0.68 -0.09 -0.51 -0.39 0.57 -1.06 1.29 0.4 0.04 -1.27 0.13 -0.71 -2.92 -1.44 -0.8 -0.36 0.09 -1.95 -0.86 -0.49 -1.41 -0.83 -1.23 -1.68 0.21 0.33 0.33 0.98 1.21 0.62 0.73 0.75
-0.71 -0.44 -0.46 -0.31 -0.11 -0.12 0.67 0.84 0.33 -0.14 -0.96 1.04 0.31 0.78 -0.93 -0.59 0.51 -1.14 -1.36 -1.44 -1.33 0.9 0.77 -1.53 0.79 0.17 0.44 -0.98 -0.33 0.24 -0.59 -0.6 0.05
0.46 0.83 -0.31 -0.79 -1.02 -0.21 1.38 0.68 0.18 -0.2 -1.21 0.43 0.65 0.05 1.03 -0.18 -0.51 -0.66 -0.67 -0.86 -0.77 0.8 0.19 0.45 -0.33 -0.2 -0.21 -1.53 -0.34 -0.26 -1.45 -1.46 -0.01
0.88 0.49 0.4 0.0 -0.32 -0.11 2.44 1.93 1.86 0.1 -4.35 0.2 -0.0 -1.06 - -4.79 -0.77 - -5.73 - -5.77 -0.66 -0.02 -2.05 -0.11 -0.02 -0.06 -2.12 -0.89 -0.06 -2.44 -3.06 0.75
0.51 0.22 -0.29 -1.25 -0.12 0.96 0.35 1.15 1.23 0.32 -0.63 0.33 -0.0 -2.8 -0.03 -1.62 -0.69 -1.04 -0.63 0.34 -0.14 1.79 -0.2 -1.56 0.65 -1.41 -0.5 -0.69 -0.49 -0.34 -0.97 -0.99 -1.07
0.77 0.36 0.29 -0.12 0.26 0.62 -0.74 0.89 0.51 0.11 -0.26 -0.35 -0.51 -0.05 -0.61 -0.56 -0.45 -0.13 -0.85 -0.79 -0.8 0.31 0.19 -0.39 -0.2 0.2 0.22 -0.03 0.3 -0.03 0.04 -0.29 -0.22
-0.44 -1.3 0.19 0.4 -0.4 1.09 0.59 2.39 1.91 1.97 - -0.72 1.31 - -3.12 - 1.29 - - - - -6.33 0.49 -0.53 1.66 -2.64 -0.73 -4.63 -2.99 -2.9 -4.37 - -4.07
0.2 1.28 -0.65 -0.45 -0.74 -0.38 1.4 1.24 1.15 1.22 -2.64 1.13 -2.19 0.54 -2.33 -3.2 -0.08 -3.19 -3.25 -3.2 -3.72 0.69 -1.22 0.12 -1.59 0.27 0.06 -0.39 0.24 0.03 -0.58 -0.51 0.49
-0.37 -4.08 0.27 -0.24 -1.75 - -0.38 1.77 0.78 1.86 - 0.6 1.3 2.02 - - -0.17 -2.0 - - - 1.32 -2.2 -2.33 2.23 -2.91 -1.65 -3.84 -0.05 -0.97 -3.53 -3.74 0.46
0.47 0.43 0.25 -0.02 -0.14 -0.13 -0.3 0.81 0.32 0.53 -1.14 -0.14 -0.04 -0.39 -0.06 -0.63 -0.02 -1.1 -1.09 -1.14 -1.01 -0.1 0.1 0.06 -0.45 0.11 0.2 -0.05 0.5 0.54 0.21 -0.05 0.53
0.68 -0.16 0.22 -0.07 0.31 0.44 0.02 1.09 0.56 0.48 -0.8 -0.31 -0.54 -0.58 -0.61 -0.67 0.18 -0.72 -0.91 -1.11 -1.02 -0.01 0.24 -0.41 -0.21 -0.22 -0.1 0.12 0.3 0.18 -0.01 -0.07 0.64
-3.95 -1.78 -3.73 -2.42 -2.18 0.32 1.59 0.59 0.92 1.06 -0.42 0.11 -0.37 2.65 0.1 -0.39 0.98 -1.19 -0.89 -0.93 -1.04 -2.17 -4.42 -6.87 -0.45 -1.63 -1.13 -5.21 -1.22 -1.58 -6.97 -7.78 2.37
-1.1 -0.65 -1.08 -0.32 -0.19 0.07 0.27 0.59 0.89 0.8 -0.38 0.34 0.22 0.09 -1.44 -1.42 0.9 -1.07 -1.97 -2.27 -2.03 0.44 0.54 -1.19 0.96 0.38 0.62 -0.52 0.47 0.42 -0.4 -0.5 0.52
0.37 0.27 0.03 0.08 0.25 -0.02 0.89 0.96 0.42 0.14 -1.34 0.04 -0.38 -0.58 -1.13 -1.62 0.1 -1.19 -1.52 -1.46 -1.36 0.18 0.17 -0.44 0.13 0.09 0.15 -0.17 0.2 0.52 -0.0 0.26 0.86
0.45 -0.5 0.28 -0.49 -0.05 -0.84 0.38 0.91 0.11 -0.48 -0.67 0.22 -0.31 0.25 0.2 -0.6 -0.32 0.09 -0.52 -0.51 -0.54 -0.24 -0.37 -0.04 -0.14 -0.06 0.15 0.1 0.51 0.44 0.3 0.23 0.2
-0.63 -0.37 -0.56 -0.22 -0.8 -0.25 0.04 0.77 0.37 -0.16 -0.54 0.28 0.09 0.25 -1.38 -0.4 0.05 0.33 -0.12 -0.2 -0.07 0.83 0.4 0.08 0.83 -0.75 -0.68 -0.81 0.26 0.62 -0.43 -0.52 0.56
-0.58 -0.39 -0.4 0.01 0.12 0.35 0.55 0.24 0.12 -0.08 -0.73 0.96 -0.2 0.52 -1.8 -1.27 0.53 -1.44 -1.77 -1.8 -1.52 0.55 0.48 0.65 0.49 0.02 0.21 -0.69 0.4 0.72 -0.78 -0.6 0.72
0.57 0.91 -0.81 -1.26 -1.03 -1.8 0.67 1.98 1.55 0.6 -4.73 -0.0 -0.36 -0.41 -4.12 -4.94 -0.44 -5.32 -6.55 -5.75 -6.88 -1.09 1.3 -1.14 0.06 -0.75 -0.36 -0.28 0.84 0.83 0.0 -0.82 1.4
-0.15 -0.59 0.02 0.05 0.43 0.23 0.47 1.08 0.53 0.4 -1.17 0.28 -0.03 0.1 -0.57 -1.11 0.68 -0.08 -0.85 -0.71 -0.72 0.43 -0.07 -0.96 0.73 -0.24 0.13 -0.79 -0.16 0.26 -0.54 -0.61 0.02
-5.69 -4.36 -3.87 -1.59 -1.42 0.73 -1.14 0.63 0.29 1.38 1.15 -0.35 0.88 1.13 -1.88 0.31 -0.36 -0.0 -0.37 -1.44 -0.85 1.73 2.26 -4.87 1.65 -2.35 -3.25 -1.02 -3.92 -5.36 -1.94 -2.52 -4.35
-0.03 -0.15 -0.56 -0.82 -0.83 -2.34 0.67 1.51 0.71 0.95 -0.84 0.0 1.6 0.62 -4.1 -1.68 -0.22 -1.47 -1.98 -2.72 -1.84 0.98 0.61 1.33 0.02 -0.43 -0.06 -1.52 0.1 -0.09 -0.94 -1.81 -0.31
0.83 -0.3 0.24 0.64 0.59 -3.94 2.65 1.62 1.65 0.01 - 0.48 0.92 -1.48 - -3.9 1.15 - - - - -0.6 -0.43 -3.06 1.56 -0.75 -0.05 - -3.64 -4.81 - -4.97 -1.07
0.88 1.21 0.05 -0.24 -0.43 0.08 0.96 1.04 0.85 0.4 -1.94 0.12 -0.17 -0.19 -1.9 -2.13 0.36 -1.83 -2.51 -2.61 -2.18 -0.36 0.14 0.06 0.1 -0.27 0.06 -0.59 0.62 0.41 -0.46 -0.46 0.56
-0.74 -1.85 -0.69 -2.05 -0.42 -1.07 1.07 2.17 0.98 0.84 -0.39 -0.63 -2.35 - 0.17 0.08 -1.19 0.39 0.06 -1.0 0.38 -1.71 -1.03 2.99 -2.04 -2.04 -2.27 -1.55 -1.19 -1.62 -2.87 -1.61 -1.69
-0.15 -0.06 -0.3 -0.96 -2.82 -0.22 2.86 2.47 1.45 -0.3 - 0.36 1.73 - - - 0.75 - - - - 0.86 -1.56 - 1.62 -3.52 -3.51 -4.37 - -4.44 - - -0.51
-1.08 -2.71 -0.1 0.19 -1.79 -0.83 -0.84 1.15 -0.05 0.85 - -1.4 1.21 2.29 - - 0.46 - - - - 1.85 -0.51 0.28 2.12 -3.62 -1.06 -1.7 0.14 0.57 -2.48 -4.28 0.47
-0.17 -0.76 -0.93 -1.31 -1.49 -1.39 2.18 1.65 1.24 1.06 -0.56 1.82 0.35 0.43 -2.37 -0.08 -0.67 -0.92 -1.27 -0.47 -2.44 1.36 -1.12 -3.95 1.43 -0.68 -0.57 -3.78 - -5.66 - - -3.04
0.64 - - 0.17 -0.06 - - 3.24 0.6 2.79 -1.54 - -1.66 - - - 1.21 - - - - -0.08 - - -0.53 -1.27 -1.07 - 1.17 0.97 - - 0.82
-0.09 -1.18 0.4 0.39 1.11 1.51 -1.68 1.94 1.63 1.06 -5.69 -2.41 -4.81 -1.55 - - -0.61 - - - - -1.57 -1.39 -2.39 -1.37 -0.85 -0.23 0.85 1.14 0.49 1.03 0.32 1.03
0.23 -0.3 0.09 -0.09 0.37 -0.13 0.5 0.3 0.72 0.41 -0.75 0.36 0.35 0.03 -1.01 -0.72 -0.47 -1.43 -1.64 -0.89 -0.92 0.8 0.29 0.13 -0.21 -0.48 -0.42 -0.05 0.51 0.5 0.19 -0.07 0.19
-0.01 -0.11 -0.41 -1.37 -1.32 -0.81 0.99 1.59 1.08 1.01 -1.25 -0.1 1.07 -0.49 -1.74 -0.29 -0.12 -2.76 - -2.54 -2.9 0.97 -0.07 2.04 1.3 -1.55 -0.89 -3.04 -0.54 0.2 -2.68 -2.92 -0.86
-0.62 -0.41 -0.82 -0.28 -0.72 -0.5 -1.5 1.11 0.62 1.0 0.18 0.27 0.1 -0.45 -1.34 -0.25 0.31 0.07 -0.19 -0.37 0.15 -0.18 2.62 0.85 0.64 -3.05 -2.25 -2.57 -1.48 -1.43 -2.54 -2.63 -1.14
0.12 0.0 0.01 -0.25 -0.25 -0.01 0.75 0.71 0.12 0.49 -0.0 0.21 0.61 -0.32 0.52 0.46 0.01 -0.13 -0.38 -0.49 -0.27 0.08 0.24 0.03 0.56 -0.52 -0.53 -1.69 -0.2 -0.1 -1.27 -1.9 -0.03
0.82 -0.27 0.12 -0.4 0.33 0.79 1.7 1.6 0.92 0.08 -0.79 0.5 -0.7 -0.59 -0.77 -0.48 -0.84 -0.57 -0.51 -0.66 -0.46 -0.28 -1.08 0.16 0.2 -0.92 -0.82 -0.71 -0.55 -0.86 -0.76 -0.68 -0.39
-3.16 -4.96 -1.02 -0.14 0.57 1.34 -1.88 1.11 1.19 2.23 0.3 0.01 0.9 0.3 -0.6 -2.48 0.63 -2.67 -2.01 -3.36 -2.06 -0.31 1.39 -4.85 1.86 -2.52 -2.08 -2.52 -1.07 -1.83 -2.53 -2.66 -0.28
0.9 -0.83 0.51 -1.0 -4.2 - 1.73 2.0 0.97 0.73 - -0.08 1.18 -2.35 -1.76 -1.85 0.48 - -3.97 -4.03 - 0.57 -1.89 0.37 1.21 -1.52 -0.93 -0.8 0.2 -0.06 -0.14 0.11 0.33
0.67 0.83 -0.19 0.28 0.94 0.96 0.52 1.88 0.59 0.06 -1.33 0.46 0.22 -0.74 -3.07 -1.31 1.27 -1.65 -1.58 -1.62 -2.19 -0.37 -0.7 -1.53 0.77 -0.7 -0.5 -1.09 -1.07 -0.59 -1.16 -0.96 0.06
1.57 1.0 1.23 0.78 0.98 0.2 0.22 1.41 0.9 0.04 -1.85 -0.18 -0.62 0.44 -1.34 -1.55 1.56 -1.72 -1.94 -1.48 -1.86 0.25 0.47 -1.63 -0.02 -0.5 -0.57 -2.03 -2.8 -3.15 -2.89 -3.38 -3.43
-0.05 -0.34 0.11 -0.17 0.18 0.03 0.37 1.57 0.7 0.57 -0.76 -0.34 -0.75 -0.58 -0.18 -0.87 0.52 -0.15 -0.71 -0.68 -0.82 -0.39 -0.45 -0.46 -0.2 -0.15 0.17 -0.23 0.18 0.44 -0.03 -0.15 0.26
0.41 1.01 0.11 -0.05 -0.19 0.08 -0.31 0.92 0.76 1.37 -0.95 -0.19 -0.41 -0.35 -0.56 -1.39 0.01 -1.15 -0.83 -1.42 -0.98 0.1 -0.13 -1.31 -0.06 0.39 0.71 -0.37 -0.17 0.15 -0.26 -0.45 0.25
-2.08 -3.48 -1.36 -1.22 -1.02 -0.92 -2.14 0.88 -0.09 -0.1 0.29 0.65 0.1 0.94 0.27 0.46 -0.29 0.55 0.38 0.08 0.44 1.34 -0.3 0.32 0.69 -0.1 -0.24 0.13 -0.71 -1.03 -0.3 -0.0 -0.88
0.22 -1.69 0.31 -0.12 0.94 0.65 1.24 1.2 1.26 1.5 - 0.03 -0.22 -1.58 -6.11 - -0.26 - - - - 2.73 -2.04 1.18 -0.17 -2.38 -1.61 -3.51 -0.86 -1.2 -2.08 -2.17 -0.31
0.58 0.8 -0.18 -0.48 -0.65 0.02 1.35 1.48 1.08 0.6 -0.52 0.33 0.53 -0.09 -1.91 -0.54 0.11 -0.65 -0.49 -0.49 -0.61 0.16 0.1 -0.06 0.28 -0.58 -0.26 -1.81 -0.87 -0.92 -1.91 -2.06 -0.46
-0.49 -0.14 -1.08 -1.38 -0.42 -0.09 0.87 0.19 -0.24 -0.79 0.81 0.49 0.8 0.24 -0.33 0.65 -1.35 1.15 0.42 0.57 0.53 0.63 - 0.82 0.67 -10.34 - -0.91 -0.23 -0.16 -0.81 -0.77 -0.39
1.28 0.44 0.68 0.34 1.56 1.45 1.65 0.27 0.66 -0.55 -5.13 0.36 -0.58 0.62 - -4.11 -1.07 - -4.05 - - 2.65 -0.98 -1.11 -0.18 -1.52 -1.18 -4.22 -1.85 -2.42 - - -0.96
0.99 1.08 0.33 -0.13 -0.0 -0.62 -0.2 1.61 0.54 0.16 -0.71 -0.38 0.31 0.49 -0.02 -2.43 -1.05 -1.4 -0.74 -0.98 -1.21 0.34 0.21 0.51 -0.3 -0.28 -0.06 -0.79 0.35 -0.07 -0.45 -1.53 -0.59
-0.03 0.07 0.04 0.3 0.41 0.66 0.73 0.75 -0.05 0.21 -1.21 0.16 0.39 0.28 -0.5 -0.82 0.78 -0.99 -1.24 -0.82 -1.1 0.01 -0.19 -0.73 0.41 -0.04 0.23 -0.23 0.07 -0.33 -0.26 -0.33 0.03
1.0 1.14 -0.3 -1.47 -3.27 -2.88 2.23 1.26 0.87 0.39 -5.41 -0.87 0.77 0.31 -6.03 - 0.81 - - - - 0.79 1.39 -0.89 0.33 -1.29 -0.14 -0.09 -0.71 -0.01 -0.63 -0.47 -1.07
-1.14 -1.21 -0.46 -0.93 -0.5 -1.42 -0.42 0.75 -0.09 -0.43 0.72 -0.38 1.37 0.22 0.3 1.08 0.01 1.42 0.76 0.76 0.59 1.14 0.39 -0.65 0.84 -3.94 -3.04 -2.41 -2.05 -1.46 -2.19 -2.32 -2.0
0.99 1.16 -0.27 -0.14 -0.01 0.31 1.93 1.3 0.8 0.46 -0.83 0.61 -1.27 0.47 -2.43 -1.02 -0.35 -1.18 -1.45 -1.63 -1.65 -1.11 -0.97 -2.87 -0.83 -0.44 -0.15 -1.89 0.81 0.57 -1.38 -2.8 0.34
0.38 0.24 -0.11 -0.2 0.14 0.33 0.71 1.24 0.74 0.41 -0.89 0.02 -0.3 -0.33 -1.28 -0.66 0.19 -0.05 -1.34 -0.74 -0.76 0.28 0.14 -0.73 0.02 -0.15 -0.03 -0.47 0.03 0.23 -0.29 -0.62 0.34
1.32 0.51 0.95 0.27 0.62 1.23 0.33 1.04 1.0 -0.5 -2.19 0.87 -0.82 -1.13 - -5.87 -0.8 -2.36 -2.53 -3.29 -2.93 2.19 0.43 0.7 -0.36 -0.53 -0.65 -1.48 -2.35 -1.75 -1.34 -1.19 -1.15
-0.61 -0.07 -0.62 -0.79 -0.63 -1.28 0.17 0.53 0.59 -0.07 0.28 0.63 0.84 0.5 -0.34 -0.08 -0.5 0.83 0.73 -0.22 0.78 0.74 0.66 -1.01 0.97 -1.45 -1.28 -1.39 -0.89 -0.52 -0.91 -1.2 -0.78
0.42 -0.07 -0.02 -0.18 0.08 -0.24 1.38 0.72 -0.31 -0.68 -0.84 0.3 -0.15 -0.89 -1.6 -1.54 -0.34 -0.5 -0.81 -1.01 -0.72 -0.74 0.14 1.31 0.1 0.41 0.45 -0.98 0.93 0.69 -1.15 -1.62 0.54
-0.87 -0.76 -1.81 -1.07 0.72 0.5 0.52 2.47 1.78 1.74 -1.53 0.65 0.57 - -2.15 - 0.34 -1.08 -2.18 -2.25 -1.21 -2.25 -2.27 -1.4 0.89 0.46 0.94 - -0.16 -0.57 -3.24 - -1.11
0.75 0.19 0.32 -0.17 -0.05 -0.41 -0.25 1.03 0.35 -0.16 -0.31 0.1 0.67 0.12 0.26 0.14 -0.08 -0.88 -0.52 -0.47 -1.11 0.22 0.28 0.18 0.9 -0.14 -0.01 -0.94 -0.6 -0.36 -1.45 -0.99 -0.06
0.92 1.5 0.31 -0.57 -0.44 -0.46 1.53 1.75 1.14 0.67 - 0.86 -1.66 0.0 - -3.87 -0.88 - - - - 1.48 0.94 -0.94 0.24 -0.69 -0.05 -4.14 -0.1 0.54 -3.7 -3.92 -0.89
-2.52 -3.36 -2.61 -2.77 -3.13 -3.31 0.79 1.41 0.99 0.17 0.32 0.17 0.03 1.1 -2.42 0.26 -0.09 1.21 0.49 0.41 0.84 1.96 0.61 1.26 0.29 -2.66 -2.14 -4.42 -3.39 -2.95 -4.75 -4.95 -2.02

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.