Heatmap: Cluster_160 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule
Ovule, mature
Ovule, pollinated
Strobilus, female
Ovulate strobilus
Microstrobilus
Kernel
Leaf
Leaf, female
Leaf, male
Leaf, salicylic acid
Leaf, seedling
Leaf, truncation control
Leaf, truncation treatment
Leaf, water
Yellow-green stripe leaves
Green leaves
Stem
Cambium
Root
3.09 -0.69 -0.11 2.62 0.91 - -0.54 -0.15 - - - - - - - -6.85 - -1.63 - -6.39
-0.28 3.43 2.36 - 1.35 - - - - - - - - - - - - - - -0.41
3.09 0.84 2.23 1.44 -0.49 -0.91 -2.94 -2.64 - - - - - - - - - -0.48 -5.95 -
1.72 -0.06 1.04 0.73 0.74 -2.24 -0.03 -2.35 -2.54 -2.7 -6.08 -4.46 -4.73 -3.33 - -2.15 -0.25 -0.76 -5.98 2.76
2.49 -0.15 0.44 0.78 -1.93 - 1.78 -1.93 - -7.29 -6.5 -4.01 -7.82 - - -3.53 -3.33 0.18 1.54 1.1
2.46 0.53 2.02 -1.25 2.44 - -0.34 -0.72 - - - - - - - - - 0.35 -2.99 -1.56
-0.55 -4.09 -2.92 1.87 2.06 -1.03 -5.18 0.7 -0.42 -0.36 -0.88 -1.63 -0.76 -0.87 -1.31 0.52 0.13 0.72 -0.02 -3.63
0.45 - - 3.07 - - - 1.0 - - - - - - - - - 3.04 - -
1.01 1.14 -1.46 2.16 1.75 -0.27 2.11 -0.82 - - - -3.55 - - - - - 0.3 - -0.86
1.52 1.93 2.09 0.95 -1.66 -1.14 -4.02 -0.48 - - - - - - - - - 2.48 - -
0.91 2.04 0.03 - - - 0.7 0.72 - - - -2.09 - - -0.34 - - 2.06 - 2.17
-0.81 0.6 1.69 -0.52 0.2 -4.83 0.04 1.34 - - - -6.29 -6.36 -4.65 -5.25 - -5.91 3.17 -5.14 -3.07
0.79 - -0.16 3.64 0.73 - 0.68 -1.27 - - - - - - - - -2.24 0.09 - -
2.49 1.28 2.47 2.13 0.77 - -3.23 -3.45 - - - - - - - - - -2.56 - -
0.17 -0.13 0.99 0.13 -0.76 -0.63 -0.93 -0.89 -2.05 -2.76 -1.89 -1.37 -4.04 -4.75 -2.03 -2.48 -2.54 -1.36 1.06 3.06
0.29 -1.47 -1.92 2.74 1.81 0.24 -4.59 -0.5 - - - -2.9 - - -6.77 -1.27 -0.62 1.9 -1.48 -0.45
-3.49 -3.7 -3.18 - -4.86 - -2.39 -4.09 - - - - - - - - - - -2.37 4.27
2.52 -0.95 1.51 1.71 0.49 -2.45 -1.17 -1.25 -3.16 -3.93 -3.16 -2.49 -4.36 -5.58 -3.88 -0.89 -1.83 1.21 0.36 -2.65
2.1 1.19 2.5 1.25 -0.29 -2.9 -0.63 -0.42 -3.74 -6.17 -4.4 -1.38 -6.13 -5.54 - -4.85 -3.14 -0.82 -5.91 0.79
-0.37 1.86 -1.8 0.32 2.45 - 2.95 -1.54 - - - - - - - - - -1.93 - -2.1
2.63 0.73 1.9 2.36 1.46 -3.41 -6.14 -2.66 -6.83 -6.15 - -7.24 - - -5.48 - - -2.79 -5.19 -5.55
2.29 - 1.81 3.37 - - - 0.38 - - - - - - - - - - - -
-0.45 1.16 -4.76 2.31 -1.12 0.73 0.94 0.5 - - - -6.71 - - -3.98 - - 2.71 - -
0.84 0.42 0.67 0.42 0.7 -1.7 0.02 -0.03 -0.22 -0.09 -0.6 -0.53 -0.43 -0.44 -0.68 -0.91 -1.22 0.89 0.13 -0.23
1.44 -0.72 -0.27 1.33 -0.2 -0.12 -6.3 -0.1 -2.8 -2.16 0.77 -0.27 -0.94 -1.43 0.65 0.86 1.1 -0.18 -3.24 -1.74
1.6 0.26 1.1 0.82 0.21 0.85 -0.6 -0.56 -0.66 -0.99 -0.87 -1.79 -0.84 -0.82 -0.78 -0.23 -0.93 0.53 -1.12 -0.74
3.15 -1.47 2.18 2.28 -0.9 -5.75 -4.71 -1.36 -7.65 -4.15 - - - -7.46 -5.04 -3.45 -3.2 -4.13 -5.99 -6.25
1.0 0.33 1.38 -2.07 -2.36 -0.3 -1.17 0.44 -5.29 -5.21 - -6.35 - - -3.48 2.76 1.87 -1.09 - -4.69
1.31 - 0.87 2.73 1.81 -2.34 -0.37 -0.91 - - - - - - - -1.84 - 1.9 - -
3.13 - - 2.11 - - 2.72 -1.45 - - - - - - - - - - - -
1.46 -1.93 -0.25 1.61 -0.11 -3.86 -1.62 -0.19 0.5 0.08 0.21 -1.07 -0.58 -0.81 -0.42 1.11 1.3 -2.72 -8.68 -5.46
- - -1.71 - - -1.52 1.24 1.12 -1.43 -2.71 - -2.66 - - - -0.16 -1.36 3.55 -0.61 -1.13
1.31 0.65 1.23 -0.61 -1.62 -0.77 -1.08 -1.93 -1.34 -4.13 - -1.17 -2.9 -4.78 -3.4 -0.03 0.0 -0.08 -1.75 2.79
1.56 -1.51 0.69 0.03 1.99 - -0.12 -1.58 - -3.42 - -2.27 - -3.14 -2.9 - 0.87 1.63 1.76 -
0.22 2.79 -0.06 0.49 0.52 -2.43 -10.04 -0.61 -1.26 -2.11 -1.16 -2.17 -1.58 -1.44 -0.17 -1.25 -7.74 1.97 -6.24 -
3.04 1.56 0.52 1.85 1.29 -3.66 -0.26 -3.49 - - - -3.45 -5.86 -5.05 -5.67 - -4.47 -4.13 -6.08 -3.54
1.69 1.98 - - 2.25 -1.07 -0.26 -2.46 -2.27 - -1.45 -2.59 - - -3.07 - - 1.24 1.44 -0.64
1.24 0.36 -0.72 - 0.85 2.19 0.75 -1.43 -0.64 -1.04 -0.24 -1.37 -0.23 -3.3 -2.02 - - -0.96 1.05 0.23
2.46 -0.66 0.73 1.2 - - -1.09 -0.36 - - - - - - - -2.13 - 3.03 - -1.91
0.79 0.47 0.58 1.28 0.26 -4.34 0.69 0.25 -0.78 -1.47 -1.54 -2.05 1.02 0.62 -0.6 0.61 0.51 -2.34 - -6.55
-1.41 -1.96 - 3.25 - -0.56 -3.98 -0.28 - - - -2.61 - - - 2.77 -1.08 -0.29 - -
0.13 1.22 -0.27 0.16 0.26 0.79 1.07 -0.08 -0.31 -0.56 -2.75 -0.53 -0.85 -0.51 -1.98 -0.91 -1.6 1.17 0.33 -1.13
1.21 -1.4 -0.32 1.88 -0.08 -0.73 2.56 1.05 -4.84 -4.37 -3.04 -1.59 - -3.64 - - -2.45 1.28 -5.06 -4.65
1.53 -0.02 -0.33 0.98 2.2 1.9 -2.16 0.67 - - - -3.64 -6.94 - - - -4.8 1.58 -3.69 -5.11
1.78 -0.5 0.91 2.3 1.18 1.66 -5.37 0.06 -12.3 -10.54 -9.77 -3.61 -10.54 -10.6 -10.96 -5.86 -3.29 1.18 -4.32 -4.33
0.3 2.42 0.59 -0.62 0.32 1.51 -0.84 -1.37 -2.46 -0.57 -1.38 -3.3 -3.71 -2.77 -0.95 -2.04 -2.21 0.13 1.25 -2.41
1.36 2.62 - - 2.19 -0.5 -0.23 -2.65 -2.15 - -4.05 -2.42 -4.5 -3.6 - -5.3 - 0.55 1.41 -2.03
1.51 2.09 1.31 1.18 -0.45 -1.58 -1.48 0.02 -2.75 - -4.47 -3.58 -5.77 -3.12 -3.62 -2.14 -0.04 -0.6 - 1.75
2.77 1.14 2.42 2.03 -0.06 - -2.35 -3.15 - - - - - - - - - -1.82 - -
1.19 2.31 -2.26 0.73 1.4 -2.32 -0.2 -2.1 -1.42 -2.24 - -2.57 -3.62 - - - - 0.39 2.17 -1.87
2.68 2.04 1.89 1.78 -0.91 -5.2 0.08 -2.12 - - - -7.51 - - - - - -2.2 - -1.89
-0.02 - - 0.34 - - 1.59 -1.24 - -2.18 - - - - - - - 1.96 -1.91 3.31
2.98 1.62 1.85 1.42 0.27 - -0.66 -2.06 - - - - -7.34 - - - - -0.66 -7.62 -
2.43 2.31 2.36 1.12 0.15 - -0.79 -3.4 - - - - - - - - - -0.81 - -
2.83 1.99 1.99 1.48 0.31 - -5.93 -1.58 - - - - - - - - - -0.83 -6.69 -
0.37 - - - - - 2.35 3.1 - 0.57 - - - -0.13 - - - - 1.39 -
1.92 - - - - - 2.32 0.87 -0.66 -0.46 - -1.66 - - - - - 2.91 -2.1 -
2.56 1.57 2.3 2.22 0.26 - -3.94 -2.56 - - - - - - - - - -3.19 - -
1.21 0.32 1.66 1.86 0.33 - -3.28 -0.51 -1.11 -1.61 -2.45 -3.23 -1.48 -1.86 -1.04 - -0.02 1.17 0.48 -0.42
-0.07 -0.11 1.23 -0.56 0.44 -1.35 -1.11 -0.07 -0.49 -0.54 0.2 -1.38 -1.22 -1.58 0.81 -0.08 1.09 0.77 0.14 -0.72
1.55 2.25 - -0.96 2.23 -3.33 0.14 -0.87 -1.88 -2.15 -2.76 -1.33 -2.17 -2.5 -1.81 - - 0.31 0.48 -0.02
2.19 1.38 2.13 2.53 0.77 -3.54 -2.4 -1.12 -4.18 -4.69 - -4.24 - - - -3.58 - - -5.51 -
- - - - - - - - - - - - - - - - - - - -
-0.76 2.57 -2.21 -1.04 -0.06 -0.15 2.91 -1.6 - - - -2.41 - - - -2.82 -1.83 1.31 - -
2.53 1.63 2.58 1.09 -0.99 - -7.86 -3.33 -6.04 -6.07 - -2.41 - - - - -4.63 -0.6 0.4 -2.49
- - - - - - 3.08 2.13 - - - - - - - - - 1.35 - 2.22
1.07 -0.19 0.98 -1.19 -0.62 0.14 0.05 -1.02 -0.92 -1.31 -1.61 1.09 -3.2 -2.16 -1.8 -0.48 -0.36 -2.61 -7.4 2.49
2.43 2.03 1.63 1.59 0.83 -4.35 0.25 -1.08 - - - - - - -8.86 -5.76 -5.65 -1.46 -1.71 -2.26
2.24 1.95 2.42 1.91 0.44 - -2.39 -1.24 - - - - - - - - -3.01 -2.29 - -
2.56 0.95 0.12 2.07 -0.17 -1.88 0.43 -1.81 -4.11 -3.02 - -4.0 - - -2.44 - -2.1 0.22 -0.79 0.74
2.44 - 0.78 1.6 -0.44 -0.67 -0.45 -1.72 - -2.13 - - - -4.37 -2.1 - -2.79 1.26 -0.11 1.78
3.2 -0.55 1.17 2.3 0.48 -5.47 0.12 -4.04 -6.66 -6.26 -5.5 -6.41 -6.33 -8.52 -4.57 -4.46 - -2.33 - -7.31
3.32 -0.72 1.24 1.82 1.01 - 0.42 -4.13 - - - - - - - - - -4.37 - -5.5
3.07 1.81 1.37 2.09 0.05 -7.69 -4.51 -4.52 - - - - - - - - - -2.71 - -
2.56 - 0.08 3.63 - - -0.92 -3.13 - - - - - - - - - - - -
3.74 - -1.63 1.18 -2.91 -4.78 -1.01 0.78 - - -6.08 - - - -5.13 - - 0.64 -3.47 -
0.87 -0.83 -1.87 1.51 -0.66 -1.47 1.7 0.57 - - -7.59 -7.86 - - - - - 3.08 -3.19 -2.71
0.45 1.39 2.06 2.52 -0.08 -0.55 0.81 0.03 -5.93 -5.21 -4.46 -4.73 - - - -4.07 -1.21 -0.43 - -1.46
0.57 1.29 -2.1 0.96 0.13 -1.34 0.26 -0.32 -0.55 -0.74 -0.55 -0.39 -0.32 -0.35 -0.1 -0.53 -0.73 -0.22 1.18 -0.44
1.68 - 2.52 1.55 1.39 - - 0.3 - - - - - - - - - 1.05 1.14 -
0.99 -1.57 1.6 2.47 -1.15 - -2.0 0.44 -4.27 - - -4.51 - - - - - 2.78 -3.18 -
2.17 2.51 2.41 1.24 0.47 - -2.69 -3.24 - - - - - - - - - -1.12 -6.46 -
-0.15 1.41 3.69 0.63 0.56 - - -1.03 - - - - - - - - - - - -
1.98 -1.72 0.23 1.99 -0.14 -1.27 1.34 -0.2 -1.97 -2.8 -0.19 -0.76 -1.79 -2.38 -0.29 -1.83 0.69 -0.3 - -6.86
1.78 0.01 -0.71 1.32 0.27 -0.27 1.66 -0.04 -1.07 -1.03 0.2 -0.84 -1.22 -1.41 0.39 -2.28 -2.59 -2.88 -1.9 -0.45
1.64 0.8 -1.29 1.43 0.68 -0.21 1.56 -0.16 -1.18 -1.27 -1.62 -1.43 0.27 0.05 -0.21 -2.34 -2.67 -4.55 -2.29 -1.06
1.44 -1.1 1.64 2.05 0.5 -0.16 -0.96 -0.28 -1.7 -2.73 -2.13 -1.72 -2.37 -2.89 -2.43 -1.54 -0.83 0.4 0.77 -1.08
1.2 -0.06 1.7 1.95 1.06 -4.84 -3.02 1.52 -4.37 -5.96 - -4.69 - -4.08 - -3.09 -4.21 2.06 -7.79 -6.27
2.77 1.59 2.22 1.93 -0.04 -4.19 -2.79 -3.64 - - - - - - - - -1.54 -3.64 - -
3.06 1.39 1.48 2.17 0.18 -7.11 - -1.67 -12.9 - - - - - - -4.23 -4.61 -2.29 - -8.14
-0.62 - - - - - 2.26 1.37 - - - - - - - - - 3.17 - 1.57
2.91 -2.9 -0.68 -1.36 - 1.89 2.82 -3.0 - - - - - - - - - -1.43 - -4.36
3.13 -0.05 1.76 1.94 0.19 0.82 -4.72 -4.8 -9.08 - - - - - - -5.9 - -4.5 - -7.28
2.64 -0.81 2.27 0.31 -0.58 -1.1 1.27 -0.92 - - - - - - - - - -1.53 -2.46 1.35
- - - - - - - - - - - - - - - - - - - -
2.76 1.03 1.7 1.99 -0.18 -0.59 -4.03 -1.18 -2.28 -2.28 -4.18 -5.29 -3.47 -5.46 -3.71 -2.58 -1.06 -1.16 -6.77 -2.75
2.2 0.81 1.89 0.89 1.0 - -0.13 -1.49 -1.66 -1.17 -0.7 -0.87 -2.28 -2.98 -4.0 -0.02 0.31 - -2.73 -2.98
2.99 - - 2.64 - - -0.65 0.17 - - - - - - - - - 1.96 -2.82 -
1.85 2.84 2.03 0.86 0.06 - -3.15 -0.68 - - - - - - - - - 0.63 - -
-1.42 - -0.49 - -1.98 0.16 -2.92 0.82 -0.01 - -0.53 -0.8 1.79 0.15 0.93 -0.05 -1.57 2.48 - -
-2.11 - - - - - -2.0 1.62 1.28 - -1.17 -3.1 1.51 -0.05 -0.23 1.14 -1.03 2.57 -2.62 -
2.91 1.0 -0.28 -1.27 -0.71 -1.77 2.68 -1.35 -4.24 -2.79 -3.04 -5.92 -3.32 -4.42 -3.16 -1.95 - -0.56 - -
2.49 1.42 1.1 2.93 0.4 - -4.17 -2.78 - - -9.4 -12.27 -11.47 - - - - -2.69 -1.85 -6.82

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.