Heatmap: Cluster_171 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial Stem
Mature Aerial Stem
Syangia
Rhizome
-1.07 -0.0 -1.26 1.08
-0.31 0.1 -2.3 0.94
-0.02 0.2 -0.72 0.33
Pnu_g01963 (TET2)
-0.05 0.27 -1.65 0.6
-0.07 0.01 -0.2 0.22
Pnu_g02394 (RAC3)
-0.19 0.27 -0.86 0.46
0.21 0.35 -1.03 0.11
0.01 -0.04 -0.29 0.27
0.02 0.02 -0.46 0.32
Pnu_g03447 (FTA)
-0.25 0.19 -0.35 0.3
-0.38 0.35 -0.72 0.43
0.0 0.09 -1.61 0.68
-0.23 -0.05 -0.22 0.4
-0.54 0.29 -0.4 0.42
0.05 0.09 -0.39 0.18
-0.08 -0.02 -2.06 0.87
-0.54 0.12 -0.78 0.72
-1.33 0.43 -0.96 0.8
Pnu_g06036 (BIP1)
-0.16 0.04 -0.4 0.4
-0.16 0.08 -0.09 0.15
-0.26 0.05 -0.4 0.46
Pnu_g07366 (AAT)
0.0 0.01 -0.49 0.35
-0.12 0.09 -0.33 0.29
-0.1 0.14 -0.33 0.22
-0.44 0.39 -0.62 0.38
-0.17 0.14 -0.33 0.28
-0.03 0.08 -0.17 0.1
-0.4 0.52 -0.88 0.34
Pnu_g09186 (PHS2)
-0.23 0.03 -0.38 0.44
-0.01 0.09 -0.5 0.31
0.07 0.01 -0.26 0.15
-0.04 0.01 -0.12 0.14
-0.29 0.12 -0.23 0.32
-0.07 0.01 0.03 0.03
Pnu_g10304 (GLT1)
-0.0 0.04 -0.45 0.31
-0.14 0.07 -0.17 0.21
-0.69 0.15 -1.0 0.82
Pnu_g10917 (SGS3)
-0.1 0.07 -0.34 0.3
Pnu_g11046 (HAT14)
-0.91 0.28 -0.56 0.65
Pnu_g11231 (MEE18)
-0.03 0.27 -1.14 0.44
-0.12 0.09 -0.21 0.2
Pnu_g11720 (UGLYAH)
-0.19 -0.08 -0.4 0.51
Pnu_g12242 (UBC9)
-0.22 0.13 -0.11 0.16
Pnu_g12581 (PAF2)
-0.09 0.14 -0.35 0.22
-0.11 0.12 -0.38 0.29
-0.11 0.14 -0.33 0.23
Pnu_g13009 (SR1)
-0.05 0.11 -0.45 0.28
Pnu_g13238 (ADT6)
-0.15 -0.08 -0.42 0.49
-0.4 0.11 -0.34 0.46
-0.21 0.01 0.12 0.05
-0.13 0.26 -3.96 0.87
-0.29 0.18 -0.85 0.57
-0.38 0.15 -0.87 0.65
Pnu_g15568 (CAC3)
0.01 0.04 -0.58 0.38
-0.2 -0.1 -0.48 0.57
0.11 0.18 -0.53 0.13
-0.42 0.05 -0.38 0.54
Pnu_g16856 (RDR1)
-0.02 0.13 -0.78 0.41
-0.24 -0.11 -0.47 0.59
0.01 -0.28 -0.89 0.7
-0.08 0.01 -1.18 0.68
Pnu_g17898 (SD2-5)
-0.2 0.06 -0.34 0.37
Pnu_g18297 (SD2-5)
-0.31 0.18 -0.19 0.25
-0.04 0.07 -2.89 0.88
0.02 0.09 -0.36 0.19
-0.26 0.06 -0.43 0.47
Pnu_g18677 (ACLA-2)
-0.02 -0.05 -0.4 0.37
Pnu_g18980 (XBAT35)
-0.09 0.05 -0.15 0.17
0.13 0.12 -1.11 0.44
-0.09 0.08 -0.4 0.31
-0.68 0.3 -0.41 0.48
Pnu_g19850 (NIK3)
-0.15 -0.12 -0.66 0.62
Pnu_g20040 (GAPCP-2)
-0.48 -0.3 -0.73 0.9
Pnu_g20389 (CUM2)
-0.13 0.04 -0.19 0.24
-0.71 0.35 -2.48 0.95
Pnu_g20696 (GRP2)
-0.0 0.02 -0.23 0.18
Pnu_g22371 (LSH4)
-0.55 0.31 -1.02 0.67
-0.23 -0.27 -1.19 0.91
Pnu_g23607 (LACS9)
-0.18 0.28 -1.34 0.59
-0.31 0.27 -0.54 0.38
-1.81 -2.8 -0.68 1.56
-0.8 0.18 -1.53 0.96
-0.16 0.23 -0.59 0.34
-0.1 0.05 -0.15 0.18
-0.25 0.4 -1.33 0.53
-0.13 0.03 -0.32 0.34
Pnu_g26277 (FER)
-0.24 0.07 -0.92 0.66
-0.59 0.12 -0.74 0.72
-1.11 0.45 -1.28 0.81
-0.4 0.3 -1.23 0.66
0.12 0.11 -0.86 0.35
-0.31 -0.05 -2.93 1.07
-0.1 -0.29 -0.53 0.64
-0.51 0.14 -0.42 0.54
-1.55 0.72 -1.58 0.75
0.05 0.14 -1.81 0.66
-0.03 0.01 -0.11 0.12
-0.22 0.2 -0.43 0.33
0.05 0.11 -0.19 0.01
-0.4 -0.01 -0.72 0.72
-0.73 0.4 -0.58 0.5
Pnu_g30288 (VPS2.3)
-0.24 0.19 -0.23 0.22
0.37 -0.18 -0.62 0.22
-0.18 0.27 -0.34 0.16
-0.23 0.18 -1.9 0.8
-0.32 0.09 -0.87 0.66
-0.27 -0.04 -0.05 0.3
Pnu_g31620 (IQD6)
-0.21 0.33 -1.56 0.63
Pnu_g31675 (BLH1)
-0.32 0.2 -0.27 0.29
-0.32 -0.22 -0.28 0.6
-0.05 0.04 -0.97 0.58
-0.33 0.19 -0.61 0.5
Pnu_g32528 (OPCL1)
-0.28 0.12 -0.07 0.18
Pnu_g32812 (ALDH2B)
-0.25 0.14 -0.51 0.44
Pnu_g33048 (PLD)
-0.12 -0.11 -1.48 0.84
0.08 -0.01 -0.21 0.12
Pnu_g33522 (ACLA-2)
-0.1 -0.01 -0.38 0.39

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.