Heatmap: Cluster_4 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log₂ transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene	Aerial Stem	Mature Aerial Stem	Syangia	Rhizome
Pnu_g00272	0.87	0.34	-1.54	-0.82
Pnu_g00280 (UBC30)	0.58	0.69	-2.86	-0.42
Pnu_g00328 (ERG28)	0.57	0.24	-0.99	-0.27
Pnu_g00563 (PORB)	1.06	0.42	-2.6	-1.26
Pnu_g00624 (ANN5)	0.6	0.3	-0.98	-0.42
Pnu_g00728 (NRAMP6)	0.77	0.32	-1.39	-0.58
Pnu_g00822	0.58	0.28	-1.05	-0.32
Pnu_g01303	0.73	0.43	-1.26	-0.79
Pnu_g01692	0.67	0.38	-1.41	-0.46
Pnu_g01696 (cICDH)	0.48	0.19	-0.5	-0.4
Pnu_g01728	0.72	0.47	-2.69	-0.31
Pnu_g02109	0.95	0.44	-2.4	-0.95
Pnu_g02424 (HEME2)	0.91	0.47	-1.87	-1.14
Pnu_g02595 (ATG8C)	0.51	0.19	-0.64	-0.34
Pnu_g02754 (DHDPS2)	0.38	0.25	-0.5	-0.31
Pnu_g02776	0.57	0.4	-1.28	-0.35
Pnu_g02878	1.17	0.33	-2.83	-1.53
Pnu_g03337	0.53	0.31	-0.72	-0.5
Pnu_g03437	0.68	0.25	-0.87	-0.58
Pnu_g03476 (KCS4)	1.23	0.44	-4.55	-2.01
Pnu_g03880	0.65	0.34	-1.17	-0.47
Pnu_g04208 (AFT)	0.77	0.21	-1.23	-0.5
Pnu_g04521 (ACSF)	1.02	0.36	-2.43	-0.99
Pnu_g04548 (BLH2)	0.94	0.42	-2.86	-0.73
Pnu_g04708	0.95	0.39	-2.08	-0.95
Pnu_g04836	0.65	0.35	-1.21	-0.47
Pnu_g04904	1.07	0.35	-3.6	-0.9
Pnu_g05631 (CNBT1)	0.77	0.3	-1.38	-0.57
Pnu_g05661 (PUB44)	0.6	0.18	-0.81	-0.36
Pnu_g05685	0.51	0.32	-0.73	-0.47
Pnu_g05692 (RUS5)	0.6	0.3	-1.02	-0.39
Pnu_g05732	0.72	0.27	-1.03	-0.6
Pnu_g05751	1.0	0.39	-2.56	-0.92
Pnu_g05867	0.61	0.36	-1.19	-0.4
Pnu_g06024	0.82	0.29	-1.19	-0.8
Pnu_g06043	0.95	0.45	-1.9	-1.21
Pnu_g06057 (CYP20-2)	0.61	0.26	-0.95	-0.4
Pnu_g06128	0.95	0.24	-1.45	-0.95
Pnu_g06190	0.87	0.5	-2.73	-0.72
Pnu_g06260	0.71	0.36	-1.46	-0.48
Pnu_g06274	0.69	0.29	-0.9	-0.67
Pnu_g06280	0.39	0.32	-0.76	-0.24
Pnu_g06292 (LHCA1)	0.99	0.46	-2.3	-1.2
Pnu_g06301	0.87	0.26	-1.24	-0.88
Pnu_g06375 (DEF2)	0.61	0.38	-1.2	-0.44
Pnu_g06399	0.42	0.28	-0.57	-0.36
Pnu_g06414	0.6	0.35	-1.44	-0.25
Pnu_g06499	0.75	0.31	-1.19	-0.65
Pnu_g06505 (ERS)	0.54	0.26	-0.63	-0.52
Pnu_g06510 (EMB1865)	0.84	0.31	-1.44	-0.73
Pnu_g06812	0.57	0.39	-1.16	-0.4
Pnu_g06874	0.5	0.38	-0.77	-0.51
Pnu_g06937 (PA200)	0.49	0.24	-0.83	-0.23
Pnu_g06983	0.65	0.2	-0.88	-0.44
Pnu_g07009 (SCY1)	0.56	0.16	-0.67	-0.35
Pnu_g07196	1.06	0.33	-2.55	-1.03
Pnu_g07709	0.58	0.56	-1.84	-0.42
Pnu_g07828	0.91	0.4	-2.07	-0.82
Pnu_g07937	0.69	0.24	-1.05	-0.45
Pnu_g08131 (POLGAMMA1)	0.6	0.22	-0.83	-0.41
Pnu_g08167 (MRL1)	1.13	0.43	-2.92	-1.59
Pnu_g08207 (EGY3)	0.83	0.3	-1.27	-0.78
Pnu_g08320 (THF1)	0.58	0.49	-1.59	-0.37
Pnu_g08530 (STN7)	0.89	0.45	-1.5	-1.22
Pnu_g08567	0.86	0.35	-2.06	-0.57
Pnu_g08569	0.6	0.14	-0.74	-0.35
Pnu_g08690 (EMB2761)	0.94	0.43	-1.95	-1.08
Pnu_g08751	0.69	0.23	-1.25	-0.34
Pnu_g08814 (SFR2)	0.65	0.23	-0.97	-0.43
Pnu_g09054	0.8	0.42	-1.75	-0.68
Pnu_g09094	0.67	0.4	-1.53	-0.42
Pnu_g09111	0.94	0.41	-1.55	-1.28
Pnu_g09168 (CH1)	0.82	0.45	-1.12	-1.27
Pnu_g09207	0.79	0.37	-1.3	-0.8
Pnu_g09220	0.46	0.18	-0.62	-0.24
Pnu_g09282 (UGT85A2)	0.99	0.46	-2.4	-1.17
Pnu_g09283	0.53	0.25	-0.75	-0.36
Pnu_g09309	0.9	0.4	-1.66	-1.0
Pnu_g09544 (PNP)	0.57	0.46	-1.33	-0.42
Pnu_g09616	0.78	0.19	-1.0	-0.63
Pnu_g09758	0.5	0.2	-0.65	-0.32
Pnu_g09902	0.72	0.44	-2.41	-0.31
Pnu_g10213	0.71	0.16	-0.88	-0.49
Pnu_g10243 (LHCB5)	1.15	0.43	-3.01	-1.66
Pnu_g10362	1.21	0.64	-4.92	-3.35
Pnu_g10395 (emb2004)	0.56	0.17	-0.66	-0.37
Pnu_g10396	0.73	0.53	-2.32	-0.52
Pnu_g10532	0.78	0.47	-1.37	-0.95
Pnu_g10593 (ARASP)	0.83	0.35	-1.3	-0.87
Pnu_g10602	0.68	0.35	-1.29	-0.49
Pnu_g10809 (ATHM2)	0.99	0.38	-2.05	-1.09
Pnu_g10879	0.24	0.18	-0.31	-0.18
Pnu_g10890 (DFB)	0.64	0.45	-1.57	-0.44
Pnu_g10916 (emb2394)	0.79	0.44	-1.64	-0.77
Pnu_g11075	0.52	0.18	-0.56	-0.41
Pnu_g11106	0.69	0.48	-1.8	-0.49
Pnu_g11122	1.19	0.6	-3.92	-2.84
Pnu_g11148 (PGRL1B)	0.8	0.42	-1.95	-0.6
Pnu_g11220 (LIN2)	0.44	0.26	-0.79	-0.21
Pnu_g11340 (GCN5)	0.61	0.2	-0.72	-0.47
Pnu_g11529 (PGR5)	1.07	0.51	-2.53	-1.72
Pnu_g11576 (SIG5)	1.08	0.39	-2.32	-1.4
Pnu_g11577 (SIG5)	0.55	0.38	-1.14	-0.36
Pnu_g11623	0.76	0.49	-1.9	-0.64
Pnu_g11643	0.51	0.17	-0.59	-0.34
Pnu_g11654	0.66	0.35	-0.98	-0.65
Pnu_g11661 (ETG1)	0.67	0.49	-1.41	-0.67
Pnu_g11691 (SBPASE)	0.96	0.52	-2.46	-1.16
Pnu_g11797 (GGT2)	1.1	0.35	-2.53	-1.28
Pnu_g11886 (RPS1)	0.81	0.41	-1.42	-0.88
Pnu_g11907 (emb2726)	0.93	0.37	-1.84	-0.92
Pnu_g11968 (VIM1)	0.82	0.24	-1.25	-0.65
Pnu_g12096	0.6	0.34	-0.81	-0.63
Pnu_g12347	1.03	0.52	-4.2	-1.11
Pnu_g12411	0.66	0.18	-0.8	-0.49
Pnu_g12440 (TAPX)	0.86	0.41	-1.83	-0.79
Pnu_g12443 (ATAB2)	0.6	0.24	-0.65	-0.58
Pnu_g12477	1.12	0.37	-3.41	-1.2
Pnu_g12550 (PSBQ)	1.13	0.46	-3.13	-1.61
Pnu_g12773	0.43	0.28	-0.85	-0.19
Pnu_g12856	0.49	0.12	-0.58	-0.25
Pnu_g12934	0.53	0.18	-0.53	-0.44
Pnu_g13008 (emb1138)	0.76	0.54	-1.97	-0.76
Pnu_g13022 (MAR1)	0.83	0.28	-1.98	-0.39
Pnu_g13060	0.43	0.29	-0.8	-0.23
Pnu_g13115	0.7	0.18	-1.03	-0.4
Pnu_g13309 (EMB1270)	0.58	0.39	-1.0	-0.51
Pnu_g13392 (IM)	0.62	0.28	-0.84	-0.52
Pnu_g13399 (emb2726)	0.86	0.39	-1.9	-0.7
Pnu_g13456 (ORP1C)	0.56	0.33	-1.15	-0.3
Pnu_g13481 (RSH1)	0.73	0.2	-1.09	-0.46
Pnu_g13483	0.67	0.21	-0.89	-0.5
Pnu_g13633	0.73	0.24	-0.96	-0.63
Pnu_g13671 (PIFI)	1.02	0.26	-2.06	-0.89
Pnu_g13806	0.73	0.36	-1.26	-0.65
Pnu_g13918 (AP2)	0.67	0.23	-0.76	-0.63
Pnu_g14012	1.01	0.45	-2.47	-1.17
Pnu_g14393	0.73	0.22	-1.13	-0.47
Pnu_g14863	0.71	0.2	-0.92	-0.53
Pnu_g15082	1.1	0.4	-3.0	-1.29
Pnu_g15303	0.92	0.36	-2.16	-0.75
Pnu_g15671	0.93	0.27	-1.63	-0.83
Pnu_g15690	0.93	0.62	-2.28	-1.51
Pnu_g16313	1.13	0.76	-3.99	-4.22
Pnu_g16700 (MSS1)	0.78	0.61	-2.43	-0.81
Pnu_g16807	0.89	0.31	-1.42	-0.9
Pnu_g17254	0.39	0.14	-0.41	-0.26
Pnu_g17486	1.0	0.65	-2.71	-1.83
Pnu_g17902 (LOX4)	0.63	0.28	-1.14	-0.36
Pnu_g18072 (IGPD)	0.45	0.15	-0.48	-0.31
Pnu_g18420	1.0	0.27	-1.77	-0.99
Pnu_g18543	0.8	0.35	-1.48	-0.68
Pnu_g18781	0.7	0.22	-1.39	-0.26
Pnu_g18825 (DDM2)	0.65	0.32	-1.24	-0.41
Pnu_g18939	0.38	0.27	-0.5	-0.34
Pnu_g19032 (UGT85A1)	0.67	0.37	-1.38	-0.46
Pnu_g19246	0.54	0.37	-0.77	-0.57
Pnu_g19357 (PLSP1)	0.83	0.37	-1.55	-0.75
Pnu_g19420	0.99	0.76	-4.35	-1.87
Pnu_g19600 (FRD4)	0.58	0.26	-0.78	-0.46
Pnu_g19604	0.71	0.2	-1.08	-0.42
Pnu_g19751	1.12	0.71	-6.01	-2.49
Pnu_g19787 (CXIP2)	0.75	0.16	-1.08	-0.45
Pnu_g19826 (GPX6)	0.68	0.21	-0.94	-0.47
Pnu_g19831 (ADH)	0.81	0.41	-1.44	-0.86
Pnu_g19859 (PTAC5)	0.91	0.31	-1.75	-0.78
Pnu_g20091	0.45	0.3	-0.67	-0.36
Pnu_g20113	0.72	0.34	-1.59	-0.41
Pnu_g20117	0.61	0.27	-0.82	-0.52
Pnu_g20128	0.97	0.48	-2.04	-1.3
Pnu_g20833	0.38	0.15	-0.4	-0.28
Pnu_g20863	0.55	0.41	-1.26	-0.34
Pnu_g20972 (LPA3)	0.94	0.38	-1.67	-1.1
Pnu_g20997 (CFM2)	0.68	0.31	-1.13	-0.5
Pnu_g21927	0.77	0.42	-1.54	-0.72
Pnu_g23962 (APG6)	0.56	0.33	-1.09	-0.32
Pnu_g24007 (ZKT)	0.94	0.43	-1.87	-1.09
Pnu_g24245	0.85	0.33	-1.47	-0.79
Pnu_g24445	0.84	0.35	-2.03	-0.53
Pnu_g24464	0.62	0.27	-0.99	-0.42
Pnu_g24828 (CYP86B1)	0.6	0.45	-1.14	-0.59
Pnu_g24953 (FZL)	0.53	0.34	-0.95	-0.38
Pnu_g25600 (emb2738)	0.64	0.38	-1.44	-0.37
Pnu_g25777	0.51	0.16	-0.75	-0.21
Pnu_g25839 (HCF101)	0.85	0.53	-2.72	-0.72
Pnu_g25841	0.5	0.33	-0.88	-0.34
Pnu_g26094	0.89	0.41	-1.84	-0.87
Pnu_g26102 (THM1)	0.62	0.18	-0.97	-0.29
Pnu_g26218	0.79	0.31	-1.35	-0.64
Pnu_g26462 (PRORP1)	0.63	0.26	-0.97	-0.43
Pnu_g26979	0.97	0.41	-1.91	-1.15
Pnu_g27045	0.98	0.32	-2.02	-0.92
Pnu_g27161	0.99	0.41	-2.46	-1.0
Pnu_g27188	1.02	0.52	-2.81	-1.32
Pnu_g27366 (TGD3)	0.72	0.3	-1.57	-0.34
Pnu_g27521	0.6	0.24	-1.0	-0.31
Pnu_g30067	0.58	0.3	-1.21	-0.25
Pnu_g30629 (ATL43)	0.91	0.22	-2.56	-0.36
Pnu_g30856	1.08	0.32	-2.0	-1.37
Pnu_g30988	0.75	0.47	-1.95	-0.58
Pnu_g31087	0.53	0.61	-1.75	-0.45
Pnu_g31477 (PSAE-2)	0.85	0.51	-2.36	-0.78
Pnu_g31548	1.0	0.54	-3.46	-1.14
Pnu_g31709	0.95	0.4	-2.15	-0.95
Pnu_g31901 (BAT1)	0.57	0.39	-1.34	-0.31
Pnu_g31953 (VTE5)	0.85	0.38	-1.92	-0.65
Pnu_g32011	0.65	0.34	-0.98	-0.6
Pnu_g32113	1.11	0.65	-5.22	-2.06
Pnu_g32253 (PAO5)	1.0	0.39	-3.49	-0.73
Pnu_g32442	0.48	0.46	-1.5	-0.2
Pnu_g32701	0.77	0.23	-1.05	-0.66
Pnu_g33172	0.86	0.52	-3.0	-0.67
Pnu_g33226 (GLK2)	0.67	0.51	-2.4	-0.32
Pnu_g33743 (CYP707A1)	0.96	0.42	-2.43	-0.91
Pnu_g34063	0.76	0.43	-1.63	-0.65

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.