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Heatmap: Cluster_83 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Aerial Stem
Mature Aerial Stem
Syangia
Rhizome
-1.07 -0.15 0.71 -0.02
-3.07 -2.67 1.37 0.2
-0.63 -0.47 0.56 0.21
-1.17 -0.67 0.98 -0.07
-0.82 -0.58 1.03 -0.46
-1.5 -0.77 1.09 -0.11
-0.83 -0.54 0.79 0.03
-0.43 -0.0 0.36 -0.03
-0.75 -0.1 0.45 0.14
-1.04 -0.28 0.6 0.23
-0.67 -0.99 0.91 -0.01
Pnu_g02079 (GUT1)
 -0.43 -0.06 0.49 -0.16
Pnu_g02130 (F2KP)
 -0.36 -0.37 0.53 0.0
-0.82 -0.48 0.75 0.05
Pnu_g02652 (RAB2A)
 -0.34 0.03 0.3 -0.06
-0.9 -0.48 0.79 0.02
-3.21 -0.96 1.21 0.08
-0.76 -0.21 0.59 0.06
-0.25 -0.02 0.19 0.06
-0.92 -0.64 0.9 -0.06
-1.96 -0.27 1.01 -0.17
-0.43 -0.48 0.67 -0.07
-1.27 -0.3 0.58 0.36
-0.52 -0.03 0.45 -0.06
-1.02 -0.56 0.95 -0.15
-1.07 -0.3 0.79 -0.02
Pnu_g03853 (LFR)
 -0.32 -0.08 0.4 -0.09
-0.39 -0.27 0.56 -0.11
-0.3 -0.04 0.26 0.03
-1.23 -0.51 0.81 0.16
-0.71 -0.22 0.48 0.19
-1.89 -0.67 1.17 -0.24
-1.26 -0.69 0.97 0.0
-2.52 -0.8 1.3 -0.34
-0.59 -0.51 0.64 0.1
-1.34 -0.67 0.74 0.39
-0.74 -0.18 0.51 0.13
-0.43 -0.15 0.46 -0.03
-1.07 -0.94 0.95 0.11
-0.89 -0.4 0.84 -0.13
Pnu_g06497 (XDH1)
 -0.48 -0.35 0.59 -0.0
-0.33 -0.18 0.41 -0.0
-0.41 -0.3 0.58 -0.08
-0.77 -0.16 0.41 0.25
-1.85 -0.17 0.84 0.06
-0.51 -0.07 0.35 0.1
Pnu_g07202 (EIF3G1)
 -0.48 -0.05 0.43 -0.05
-0.67 -0.23 0.67 -0.12
-0.69 -0.71 0.8 0.04
-1.01 -0.33 0.8 -0.06
-0.72 -0.63 0.79 0.03
-0.72 0.02 0.62 -0.26
-0.51 -0.46 0.72 -0.11
-0.55 -0.31 0.66 -0.1
-0.59 -0.18 0.58 -0.06
Pnu_g07970 (TL2)
 -2.87 -1.32 1.11 0.39
Pnu_g08156 (RKP)
 -0.52 -0.22 0.5 0.04
-0.94 -0.46 0.87 -0.12
-0.87 0.04 0.64 -0.21
-2.65 -0.59 1.04 0.18
-1.99 -1.3 1.19 0.08
-0.71 -0.33 0.65 0.04
-0.43 -0.15 0.36 0.1
-0.5 -0.22 0.6 -0.13
-0.3 -0.03 0.27 0.01
-0.28 -0.13 0.37 -0.04
-2.45 -1.15 1.2 0.08
-0.28 -0.18 0.39 -0.02
-0.39 -0.14 0.5 -0.13
-0.33 -0.1 0.41 -0.08
-1.22 -0.35 0.65 0.29
Pnu_g10386 (MATR)
 -0.59 -0.2 0.64 -0.15
-0.68 -0.52 0.75 -0.01
-0.42 -0.17 0.42 0.03
-0.67 -0.43 0.78 -0.14
-0.77 -0.85 0.78 0.18
-0.56 -0.17 0.49 0.05
-0.75 -0.57 0.86 -0.13
-0.29 -0.16 0.47 -0.15
-0.5 -0.05 0.36 0.06
-0.8 -0.4 0.81 -0.12
Pnu_g11113 (EME1B)
 -0.88 -0.18 0.46 0.25
-2.51 -2.04 1.39 -0.05
Pnu_g11305 (SPS3F)
 -0.47 -0.01 0.32 0.06
Pnu_g11373 (emb1187)
 -0.9 -0.44 0.78 0.01
Pnu_g11466 (GC6)
 -0.42 -0.33 0.61 -0.1
Pnu_g11492 (GCN4)
 -0.53 -0.07 0.36 0.1
Pnu_g11496 (KP1)
 -1.6 -0.71 1.1 -0.12
-0.7 -0.27 0.68 -0.07
-1.92 -0.94 1.15 -0.0
-1.14 -0.45 0.94 -0.15
-1.95 -0.95 1.1 0.11
Pnu_g12100 (NF-YC13)
 -0.57 -0.4 0.65 -0.01
Pnu_g12142 (PEX19-1)
 -0.56 -0.06 0.53 -0.14
-0.56 -0.23 0.44 0.16
-1.04 -1.19 0.87 0.32
-0.83 -0.11 0.64 -0.07
-0.77 -0.29 0.74 -0.11
Pnu_g13293 (RVE2)
 -0.69 -0.23 0.57 0.07
-0.33 -0.16 0.38 0.01
-0.86 -0.22 0.66 0.02
-0.59 -0.22 0.57 -0.01
Pnu_g13478 (emb1967)
 -0.59 -0.12 0.38 0.15
-0.28 -0.06 0.26 0.02
-0.52 -0.34 0.52 0.11
-0.58 -0.32 0.65 -0.06
-0.33 -0.2 0.42 0.01
-0.67 -0.67 0.93 -0.26
-0.52 -0.31 0.57 0.01
-3.72 -1.04 1.25 0.08
-0.92 -0.45 0.8 -0.0
Pnu_g14571 (HAG2)
 -0.64 -0.67 0.86 -0.12
-0.75 -0.68 0.89 -0.1
-0.75 -0.86 0.77 0.21
-1.27 -0.59 0.96 -0.03
-2.52 -0.91 1.2 -0.01
-3.19 -1.27 1.41 -0.28
-0.86 -0.7 0.85 0.04
Pnu_g15316 (PUB26)
 -2.88 -3.0 1.27 0.42
Pnu_g15318 (MC5)
 -0.75 -0.46 0.61 0.21
Pnu_g15329 (ULT)
 -0.83 -0.68 0.9 -0.08
-0.26 -0.18 0.45 -0.12
-0.46 -0.5 0.65 -0.01
Pnu_g15802 (MKP2)
 -0.75 -0.34 0.87 -0.33
-1.75 -0.5 0.81 0.31
Pnu_g16043 (HSL1)
 -1.04 -0.69 0.63 0.42
-0.75 -0.74 0.64 0.33
-1.29 -1.31 0.98 0.28
-1.21 -0.39 0.83 0.03
-3.46 -0.84 1.27 -0.09
Pnu_g17364 (ADK)
 -0.91 -0.14 0.46 0.25
Pnu_g17489 (BIR1)
 -0.46 -0.05 0.3 0.1
-1.11 -1.58 1.1 0.08
-0.56 -0.29 0.56 0.04
-2.97 -0.55 1.33 -0.58
-4.39 -5.32 1.41 0.35
-0.78 -0.47 0.65 0.17
-0.3 -0.17 0.46 -0.12
Pnu_g19568 (TAF4)
 -0.39 -0.22 0.5 -0.05
-0.82 -0.32 0.66 0.08
Pnu_g20046 (emb1745)
 -0.73 -0.33 0.65 0.05
-0.6 -0.12 0.61 -0.16
Pnu_g20260 (SRX)
 -0.31 -0.07 0.37 -0.07
-0.9 -0.37 0.91 -0.31
-0.93 -0.12 0.65 -0.01
Pnu_g20595 (WRKY4)
 -0.98 -0.27 0.78 -0.08
Pnu_g20730 (VIM1)
 -0.3 -0.15 0.32 0.06
-1.13 -0.47 0.89 -0.05
Pnu_g20990 (GTE3)
 -0.58 -0.41 0.68 -0.04
Pnu_g21047 (NRPE6A)
 -0.37 -0.04 0.3 0.02
-3.36 -1.09 1.3 -0.04
-0.56 -0.31 0.51 0.13
Pnu_g21506 (CYSA)
 -0.66 -0.51 0.79 -0.1
Pnu_g21925 (NF-YB11)
 -0.88 -0.18 0.5 0.21
-1.22 -1.2 0.97 0.23
-0.6 -0.5 0.68 0.04
-0.74 -0.82 0.82 0.1
-2.4 -1.12 1.29 -0.16
-1.89 -0.97 1.04 0.22
- -2.33 1.45 0.11
Pnu_g23609 (PLP6)
 -2.39 -0.93 1.3 -0.29
-1.33 -0.46 0.92 -0.02
-0.68 -0.23 0.71 -0.17
-0.83 -0.48 0.8 -0.03
Pnu_g24450 (RPS15)
 -0.34 -0.13 0.35 0.04
-0.46 -0.28 0.54 -0.01
Pnu_g24652 (TOR)
 -0.56 -0.42 0.62 0.06
Pnu_g24657 (ZYP1)
 -0.9 -0.61 0.79 0.11
-0.83 -0.19 0.56 0.12
-0.74 -0.29 0.59 0.1
-3.1 -1.72 1.5 -0.41
Pnu_g25035 (G6PD2)
 -0.65 -0.53 0.73 0.01
-1.33 -0.39 1.0 -0.25
-0.63 -0.15 0.53 0.01
-0.91 -0.74 0.84 0.11
-0.66 -0.18 0.64 -0.12
-0.35 -0.01 0.24 0.05
-0.69 -0.85 0.96 -0.18
Pnu_g25533 (EIF4B2)
 -0.5 -0.23 0.43 0.13
-0.76 -0.2 0.44 0.24
-0.72 -0.38 0.65 0.08
-0.89 -0.41 0.82 -0.09
-1.34 -0.55 0.99 -0.09
Pnu_g26011 (DMS4)
 -0.24 -0.09 0.32 -0.05
Pnu_g26066 (ERF-1)
 -1.7 -0.94 1.26 -0.36
-1.94 -0.49 1.05 -0.06
Pnu_g26494 (CAM6)
 -1.77 -0.76 0.9 0.32
-0.63 -0.09 0.6 -0.16
-0.33 -0.18 0.37 0.04
-0.56 -0.41 0.64 0.01
-0.85 -0.21 0.84 -0.35
Pnu_g27151 (MRP11)
 -0.53 -0.41 0.54 0.14
-0.48 0.06 0.4 -0.11
-0.89 -0.45 0.77 0.04
-1.23 -0.42 1.08 -0.48
Pnu_g27622 (EMB2777)
 -0.71 -0.33 0.63 0.06
-0.85 -0.22 0.64 0.04
-0.28 -0.17 0.39 -0.03
-0.71 -0.55 0.74 0.05
-0.82 -0.56 0.74 0.11
-1.14 -0.56 0.97 -0.15
-0.4 -0.41 0.66 -0.14
-0.94 -0.4 0.89 -0.2
-0.7 -0.14 0.62 -0.08
-1.51 -0.41 1.18 -0.66
-0.56 -0.33 0.73 -0.21
Pnu_g31189 (THY-1)
 -0.39 -0.53 0.65 -0.04
-0.75 0.0 0.48 0.02
-1.14 -0.71 0.86 0.16
Pnu_g32018 (ELF6)
 -0.48 -0.34 0.49 0.12
-0.36 -0.07 0.25 0.11
-0.87 -0.32 0.87 -0.29
-0.8 -0.52 0.81 -0.03
-1.01 -1.06 0.92 0.18
-0.69 -0.12 0.45 0.13
-1.3 -0.47 0.87 0.06
-0.39 -0.28 0.58 -0.12
-0.88 -0.61 0.67 0.28

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.