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Heatmap: Cluster_193 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Aerial Stem
Mature Aerial Stem
Syangia
Rhizome
0.65 0.27 -1.13 -0.39
0.53 0.14 -0.53 -0.4
0.56 0.07 -0.6 -0.3
0.27 0.27 -0.39 -0.27
0.49 0.17 -0.42 -0.47
Pnu_g00601 (PAP29)
 0.34 0.19 -0.4 -0.27
0.51 0.24 -0.75 -0.32
0.11 0.12 -0.12 -0.13
0.17 0.14 -0.25 -0.09
0.48 0.37 -0.76 -0.47
Pnu_g01238 (CCB4)
 0.57 0.19 -0.68 -0.43
0.35 0.29 -0.57 -0.28
Pnu_g01983 (APFI)
 0.18 0.14 -0.22 -0.14
0.26 0.19 -0.2 -0.33
0.5 0.12 -0.53 -0.3
0.25 0.13 -0.27 -0.18
0.49 -0.0 -0.5 -0.18
0.36 0.06 -0.29 -0.23
0.18 0.14 -0.16 -0.2
0.42 0.13 -0.41 -0.29
Pnu_g03488 (CRR22)
 0.47 0.31 -0.58 -0.51
0.75 0.23 -0.95 -0.67
0.67 0.1 -0.82 -0.37
0.91 0.28 -1.97 -0.64
0.87 0.16 -1.16 -0.71
0.79 0.31 -1.54 -0.55
0.84 0.27 -1.2 -0.83
0.77 0.22 -1.8 -0.24
0.6 0.24 -1.1 -0.25
0.73 0.52 -2.13 -0.58
0.36 0.16 -0.37 -0.28
0.8 0.25 -1.24 -0.63
Pnu_g05780 (PBF1)
 0.24 0.17 -0.36 -0.13
0.43 0.11 -0.37 -0.32
Pnu_g06537 (PSY)
 0.7 0.03 -0.5 -0.62
Pnu_g06695 (PTAC3)
 0.55 0.19 -0.47 -0.57
0.61 0.14 -0.56 -0.53
0.34 0.13 -0.43 -0.16
Pnu_g07597 (OEP16-3)
 0.2 0.18 -0.2 -0.24
Pnu_g07667 (IMD2)
 0.48 0.15 -0.72 -0.16
Pnu_g07814 (IMS1)
 0.43 0.13 -0.5 -0.24
Pnu_g07887 (HUA1)
 0.37 0.17 -0.5 -0.19
Pnu_g08081 (DCT)
 0.5 0.12 -0.69 -0.2
0.17 0.03 -0.14 -0.07
Pnu_g08223 (ALDH2B)
 0.33 -0.0 -0.25 -0.15
Pnu_g08539 (SFR6)
 0.2 0.1 -0.24 -0.1
0.12 0.09 -0.2 -0.03
0.8 0.16 -1.37 -0.41
0.23 0.04 -0.21 -0.1
Pnu_g09107 (THO3)
 0.32 0.19 -0.29 -0.33
0.71 0.29 -1.28 -0.47
0.38 0.23 -0.45 -0.34
Pnu_g09445 (ACN1)
 0.58 0.09 -0.73 -0.25
0.53 0.16 -0.34 -0.62
0.49 0.1 -0.42 -0.36
Pnu_g09799 (Deg1)
 0.47 0.09 -0.34 -0.41
0.57 -0.03 -0.45 -0.31
0.92 0.28 -1.17 -1.15
Pnu_g10287 (GPDHC1)
 0.29 0.19 -0.39 -0.19
0.61 0.42 -1.61 -0.31
0.57 0.47 -1.15 -0.57
Pnu_g10667 (NHD1)
 0.6 0.08 -0.43 -0.55
0.25 0.34 -0.4 -0.35
0.42 0.4 -0.85 -0.34
0.58 0.2 -0.95 -0.24
Pnu_g11418 (ZFN1)
 0.48 0.26 -0.95 -0.17
0.17 0.08 -0.16 -0.12
0.22 0.14 -0.22 -0.2
0.48 0.2 -0.58 -0.34
0.45 0.08 -0.37 -0.32
0.33 0.15 -0.32 -0.27
0.3 0.12 -0.32 -0.17
Pnu_g12247 (BOU)
 0.58 0.39 -0.94 -0.56
0.53 0.23 -0.69 -0.4
Pnu_g12395 (ZFN3)
 0.77 0.03 -1.01 -0.35
0.5 0.25 -0.69 -0.36
0.38 0.2 -0.49 -0.25
Pnu_g12817 (RSR4)
 0.65 0.17 -0.81 -0.46
Pnu_g12833 (PYR4)
 0.19 0.11 -0.23 -0.11
Pnu_g12989 (ISA1)
 0.24 0.1 -0.37 -0.04
0.38 0.18 -0.41 -0.3
Pnu_g13237 (MIPS2)
 0.74 0.34 -0.98 -0.84
Pnu_g13243 (CRR22)
 0.64 0.23 -0.97 -0.4
0.25 0.03 -0.18 -0.14
0.55 0.11 -0.61 -0.31
Pnu_g13557 (PMSR1)
 0.13 0.15 -0.2 -0.1
0.35 0.28 -0.59 -0.25
0.57 0.44 -0.78 -0.81
0.53 0.16 -0.64 -0.32
0.74 0.52 -1.87 -0.68
1.02 0.07 -1.08 -1.13
0.53 0.17 -0.59 -0.4
0.42 0.23 -0.72 -0.19
Pnu_g15312 (CRR2)
 0.45 0.11 -0.48 -0.26
0.82 0.3 -0.85 -1.18
0.74 0.53 -1.68 -0.81
Pnu_g15704 (CRR22)
 0.59 0.16 -0.92 -0.24
Pnu_g15705 (OTP82)
 0.67 0.15 -0.9 -0.4
0.32 0.25 -0.44 -0.28
0.58 0.17 -0.65 -0.44
0.8 0.36 -1.71 -0.58
Pnu_g15976 (CYSB)
 0.22 0.03 -0.17 -0.11
Pnu_g16104 (CRR2)
 0.7 0.31 -1.05 -0.62
Pnu_g16158 (CRR22)
 0.65 0.24 -0.97 -0.43
Pnu_g16163 (OTP84)
 0.48 0.18 -0.75 -0.18
0.63 0.41 -1.37 -0.43
0.86 0.23 -1.13 -0.85
1.0 0.38 -1.71 -1.32
0.49 0.24 -0.87 -0.2
Pnu_g16917 (ZML2)
 0.33 0.27 -0.59 -0.2
0.68 0.21 -0.73 -0.64
Pnu_g17215 (PAK)
 0.4 0.09 -0.43 -0.19
0.51 0.21 -0.84 -0.23
0.42 0.12 -0.44 -0.25
0.34 0.46 -1.14 -0.15
Pnu_g17714 (FAD7)
 0.65 0.01 -0.52 -0.47
Pnu_g17828 (CXE17)
 0.2 0.07 -0.26 -0.04
0.4 0.36 -0.74 -0.33
0.2 0.18 -0.33 -0.11
Pnu_g18271 (cpHsc70-1)
 0.83 0.45 -1.64 -0.88
0.48 0.22 -0.79 -0.21
Pnu_g18727 (HMA1)
 0.21 0.1 -0.24 -0.1
0.56 0.31 -0.76 -0.52
0.69 0.32 -1.32 -0.44
Pnu_g19571 (EMB3003)
 0.53 0.17 -0.46 -0.51
0.22 0.25 -0.27 -0.3
0.88 0.22 -0.95 -1.07
0.5 0.05 -0.42 -0.32
0.42 0.16 -0.39 -0.35
Pnu_g20454 (RUS1)
 0.58 0.11 -0.46 -0.52
Pnu_g20962 (GSTU16)
 0.47 0.26 -0.38 -0.63
0.68 0.32 -1.35 -0.4
0.32 0.24 -0.4 -0.3
Pnu_g22583 (APC10)
 0.24 0.43 -0.7 -0.23
0.53 0.32 -0.36 -0.91
0.5 0.18 -0.81 -0.17
0.17 0.08 -0.17 -0.1
0.49 0.14 -0.68 -0.2
0.24 0.12 -0.27 -0.16
0.29 0.12 -0.25 -0.22
Pnu_g24810 (CRR22)
 0.8 0.08 -1.13 -0.42
0.87 0.34 -2.71 -0.4
0.62 0.36 -0.73 -0.82
0.76 0.21 -0.77 -0.81
0.83 0.11 -2.25 -0.1
0.54 0.14 -0.6 -0.35
0.71 0.12 -1.16 -0.27
0.7 0.13 -0.78 -0.52
0.92 0.25 -1.86 -0.65
0.77 0.29 -1.45 -0.51
0.47 0.14 -0.48 -0.33
0.41 0.15 -0.37 -0.34
0.59 0.18 -0.68 -0.44
0.65 0.43 -1.48 -0.47
Pnu_g29968 (CRR2)
 0.53 0.26 -0.92 -0.27
0.91 0.53 -4.54 -0.67
0.44 0.18 -0.51 -0.31
0.65 0.12 -0.76 -0.41
0.78 -0.05 -0.87 -0.36
0.34 0.31 -0.68 -0.19
Pnu_g30624 (CRR22)
 0.64 0.22 -1.05 -0.34
0.56 0.13 -0.62 -0.35
0.97 0.33 -1.38 -1.34
Pnu_g31095 (TGD2)
 0.63 0.13 -0.81 -0.33
0.25 0.12 -0.21 -0.21
Pnu_g31463 (ATB2)
 0.4 0.17 -0.64 -0.14
0.35 0.25 -0.53 -0.24
0.49 0.03 -0.46 -0.24
Pnu_g32036 (UPL1)
 0.34 0.13 -0.51 -0.1
0.64 0.24 -0.79 -0.55
0.69 0.17 -1.16 -0.3
Pnu_g33046 (SPL2)
 0.5 0.27 -0.61 -0.47
0.53 0.23 -0.73 -0.35
Pnu_g33305 (PAD1)
 0.34 0.06 -0.31 -0.17
Pnu_g33452 (PGK)
 0.43 0.08 -0.36 -0.28
0.44 0.18 -0.56 -0.27
Pnu_g33773 (VTE4)
 0.74 0.09 -1.01 -0.38

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.