Heatmap: Cluster_450 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Cambium and expanding xylem
Cambium
Expanding xylem
Expanding and mature xylem
Maturing xylem
Maturing xylem and dead early wood
Wood
Dead early and late wood
Dead early wood
Dead late wood
Vegetative shoots - needles
Vegetative shoots - stem
Vegetative shoots
Girdled twig - stem
Dried twig - needles
Girdled twig - needles
Needles
Needles - dawn
Needles - later afternoon
Needles - midday
Needles - night
Buds
Female flower
Male flower
Pineapple galls
Somatic germinants - abnormal type
Somatic germinants - normal type
Cell culture - H20 - 5 days
Cell culture - KI added - 5 days
Cell culture - KI added - 20 days
Cell culture - KI removed - 4 days
Cell culture - KI removed - 12 days
Cell culture - solid medium
-4.77 -5.16 -6.73 -6.19 -5.06 -5.89 0.42 -6.02 -6.76 -5.86 -0.59 0.79 0.31 0.96 -0.35 0.13 0.87 0.32 0.33 0.26 0.37 0.66 0.43 -0.17 -0.13 0.54 0.91 0.37 0.62 0.72 0.41 0.46 0.99
-1.44 -1.99 -2.23 -2.73 -2.09 -2.0 0.18 -2.2 -2.03 -2.14 0.43 0.34 0.67 -0.08 0.24 0.66 0.52 0.43 0.31 0.27 0.27 0.48 0.46 -0.64 0.42 0.16 0.23 0.3 0.57 0.67 0.33 0.25 0.65
-2.05 -2.25 -2.67 -3.01 -2.99 -2.13 -0.14 -4.44 -4.47 -3.39 -0.02 -0.19 -0.06 -0.48 0.44 -0.01 0.87 -0.02 0.42 0.68 0.4 -1.27 0.3 -0.73 0.1 1.21 1.13 0.73 0.85 0.82 0.62 0.6 0.79
-0.95 -1.05 -1.02 -1.47 -1.33 -1.42 -0.15 -2.11 -2.1 -1.83 -0.22 -0.25 0.18 -0.07 0.53 0.37 0.66 0.54 0.35 0.49 0.34 -1.06 0.2 -0.19 0.3 0.58 0.48 0.41 0.59 0.62 0.48 0.47 0.55
-3.48 -3.33 -4.51 -3.62 -4.26 -4.34 -0.1 -5.24 -5.64 -4.75 0.19 0.14 0.14 -0.36 0.04 0.6 0.86 0.5 0.59 0.73 0.65 -0.85 -0.13 -0.3 -0.12 0.93 0.91 0.55 0.77 0.9 0.52 0.69 0.91
-4.26 -5.05 -4.18 -4.6 -4.76 -6.22 0.86 -6.9 -7.77 -4.45 0.08 0.54 0.68 0.83 0.09 0.68 0.83 -0.05 0.31 0.53 0.39 0.51 0.74 -0.65 0.39 0.39 0.67 0.04 0.23 0.57 0.29 0.22 0.65
-2.43 -2.6 -2.52 -3.23 -2.23 -2.11 0.25 -4.74 -3.81 -3.42 0.2 0.49 0.22 0.42 0.47 0.73 1.09 0.59 0.43 0.3 -0.05 0.52 0.06 -0.21 0.21 0.34 0.52 0.14 0.1 0.69 0.5 0.6 0.4
-1.53 -1.53 -2.02 -2.41 -2.04 -2.09 -0.4 -1.97 -2.22 -2.04 0.45 0.39 0.03 -0.14 -0.23 -0.09 0.54 0.12 0.31 0.41 0.23 0.61 0.41 -0.31 0.53 0.33 0.33 0.45 0.83 0.84 0.46 0.51 0.91
-2.41 -2.01 -3.54 -2.87 -4.11 -3.38 0.08 -5.48 -4.16 -3.49 0.24 0.58 0.09 0.64 -0.41 0.72 0.29 0.57 0.55 0.56 0.42 0.73 0.21 -0.39 -0.33 0.25 0.4 0.28 0.77 0.98 0.28 0.65 0.79
-2.25 -3.0 -3.08 -3.25 -3.82 -4.48 0.85 -4.26 -5.35 -4.31 0.01 0.61 -0.12 -0.1 1.26 0.12 0.76 0.41 0.19 0.43 0.55 0.59 0.65 0.01 0.26 0.27 0.62 0.24 0.22 0.49 0.25 -0.02 0.68
-1.68 -1.69 -1.85 -1.96 -1.92 -1.51 -0.0 -1.94 -1.94 -1.74 0.56 0.25 -0.02 0.44 -0.46 0.56 0.24 0.72 0.43 0.9 0.32 0.44 -0.24 -0.93 0.03 0.18 0.32 0.12 0.68 1.0 0.16 0.25 0.84
-6.45 -4.8 -6.16 -4.81 -5.88 -7.27 0.27 -7.67 -9.66 -6.14 -0.26 0.77 0.47 0.25 0.72 0.23 0.69 -0.19 0.11 0.26 -0.15 0.77 0.66 0.46 0.44 0.41 0.43 0.3 0.75 0.88 0.62 0.57 0.66
-2.84 -2.8 -3.07 -2.16 -2.3 -2.06 -0.43 -3.23 -3.51 -1.9 0.47 0.33 -0.06 -0.08 0.7 0.75 0.56 0.46 0.83 0.96 0.87 -0.14 -0.42 -1.17 0.16 0.23 0.53 0.11 0.45 0.77 0.3 0.57 0.83
-5.19 -5.4 -5.64 -5.73 -6.22 -4.88 -0.94 -4.96 -6.34 -4.65 0.62 0.56 -0.61 0.36 0.51 0.42 0.46 0.73 0.95 1.04 1.07 0.46 0.12 -1.39 -0.03 0.24 0.51 0.36 0.63 0.8 0.33 0.25 0.97
-3.45 -3.95 -5.29 -5.93 -6.03 -5.57 -0.79 -8.69 -10.24 -6.54 0.63 0.08 -0.35 0.06 0.6 0.6 0.47 0.69 0.51 0.76 0.38 0.14 0.53 -0.85 -0.3 0.76 0.76 0.67 0.54 0.77 0.81 0.8 0.81
-2.95 -3.06 -2.38 -3.69 -3.63 -3.32 0.24 -2.44 -3.92 -2.42 -0.02 0.73 -0.29 0.88 -0.14 0.3 0.42 0.43 0.38 0.58 0.13 0.85 -0.33 -0.27 -0.49 0.58 0.58 0.73 0.72 0.91 0.37 0.36 0.82
-4.08 -3.53 -4.16 -3.83 -3.91 -3.29 0.63 -4.76 -4.66 -4.1 0.1 0.59 0.69 0.46 0.87 0.71 0.73 0.21 0.37 0.26 0.47 0.71 0.41 -0.15 0.89 0.38 0.43 -0.14 0.21 0.42 0.12 -0.28 0.57
-2.04 -2.23 -2.75 -2.93 -3.6 -2.98 1.0 -3.64 -4.29 -3.3 -0.36 0.52 0.59 0.5 0.65 0.14 0.7 -0.13 -0.03 -0.1 -0.19 0.57 0.3 0.13 1.02 0.42 0.44 0.16 0.61 0.92 0.05 0.03 0.64
-1.64 -1.6 -1.96 -1.58 -1.59 -1.18 0.52 -1.86 -1.94 -1.78 0.05 0.81 0.43 0.89 -0.12 0.14 0.75 0.22 0.2 0.34 0.16 0.8 0.62 -0.07 0.17 0.27 0.51 -0.19 0.35 0.45 -0.11 -0.43 0.18
-1.71 -1.79 -2.22 -3.51 -2.39 -1.44 -0.32 -2.96 -2.57 -1.62 0.57 0.29 0.42 0.21 -0.33 -0.19 0.38 0.29 0.77 -0.2 0.72 0.19 0.42 0.58 0.78 0.17 0.25 0.26 0.33 0.92 0.36 0.22 0.77
-2.67 -1.98 -3.45 -3.62 -4.38 -4.42 -0.28 -3.44 -4.78 -3.93 0.38 0.13 0.47 0.22 -0.21 0.44 0.83 0.09 -0.03 0.14 0.17 0.54 0.93 -0.76 0.57 -0.05 0.29 0.67 1.02 1.04 0.41 0.39 1.12
-1.9 -2.32 -3.1 -3.1 -3.44 -3.85 0.46 -3.88 -3.71 -3.52 -0.03 0.77 0.4 0.24 0.61 0.4 0.79 0.16 -0.04 -0.13 -0.01 0.85 0.98 -0.28 0.73 0.23 0.38 -0.06 0.66 0.89 0.22 -0.03 0.6
-2.19 -3.15 -2.85 -3.85 -3.14 -3.82 0.59 -4.68 -3.7 -4.5 0.1 0.48 0.4 0.46 0.84 0.6 0.78 0.29 0.13 0.17 0.48 0.81 0.75 0.2 0.64 0.34 0.54 -0.44 0.3 0.58 -0.07 -0.2 0.54
-3.23 -5.65 -9.16 - -5.51 -6.97 -0.38 - -6.95 - -0.4 0.45 0.52 1.64 0.13 0.03 0.73 -0.33 0.0 0.36 -0.14 0.93 0.98 -0.38 -0.38 0.52 0.91 0.23 0.74 0.87 0.57 0.27 0.62
-4.66 -4.37 -4.6 -4.97 -5.18 -5.69 0.6 -5.18 -5.91 -4.38 0.14 0.67 0.85 1.01 -0.51 0.39 0.84 0.17 0.36 0.51 0.52 0.81 1.08 0.83 0.11 0.24 0.53 -0.02 0.23 0.15 -0.1 -0.33 0.33
-3.34 -4.04 -4.8 -4.5 -5.07 -4.63 0.39 -5.56 -5.12 -6.49 0.12 0.51 0.4 0.91 0.3 0.99 0.8 0.41 0.54 0.92 0.59 0.65 0.79 -0.53 0.63 0.2 0.51 -0.07 0.12 0.28 -0.01 -0.11 0.24
-2.56 -3.01 -3.5 -3.32 -3.24 -3.57 -0.31 -3.29 -3.23 -3.39 0.63 0.51 -0.23 0.07 1.02 0.56 0.3 0.46 0.36 0.69 0.53 0.01 0.25 0.09 -0.41 0.35 0.51 0.79 0.66 0.5 0.57 0.41 0.73
-1.63 -1.69 -2.31 -2.04 -2.19 -1.91 -0.44 -2.83 -2.86 -1.8 0.62 -0.11 -0.5 0.03 0.52 0.45 0.26 0.79 0.78 0.94 0.86 -0.4 -0.54 -1.37 -0.07 0.2 0.37 0.58 0.53 0.68 0.72 0.52 0.93
-1.49 -1.54 -1.84 -1.71 -1.51 -1.28 -0.16 -1.93 -2.29 -1.38 0.26 0.22 -0.59 -0.29 0.51 0.17 0.31 0.54 0.17 0.39 0.45 -0.46 0.75 -1.39 -0.65 0.09 0.46 0.81 0.69 0.88 0.69 0.62 1.07
-3.94 -4.49 -5.73 -4.66 -5.01 -6.5 0.16 - -6.11 -4.28 -0.17 0.64 0.44 0.96 0.14 0.94 0.82 0.2 0.26 1.02 0.05 0.63 0.21 -0.29 0.49 0.21 0.5 0.1 0.61 0.73 0.26 0.17 0.67
-2.29 -2.5 -2.94 -2.9 -2.67 -2.86 0.41 -3.2 -3.32 -2.66 0.46 0.51 0.18 0.82 0.06 0.13 0.42 -0.08 0.25 0.31 0.26 0.38 0.35 0.35 0.45 0.74 0.62 -0.02 0.74 0.82 0.01 -0.05 0.86
-3.02 -2.07 -3.22 -4.76 -3.49 -4.72 -0.39 -4.89 -3.54 -0.52 0.5 0.13 0.08 0.03 -1.56 -0.26 1.04 0.1 -0.13 -0.19 0.02 0.55 0.45 -1.11 0.34 0.39 0.49 0.69 1.09 1.29 0.66 0.64 1.34
-1.69 -1.9 -1.91 -1.86 -1.6 -1.93 0.06 -2.31 -2.26 -2.46 0.52 0.02 0.47 0.27 -0.28 -0.04 0.63 0.31 0.15 0.19 -0.09 0.52 0.61 -0.16 0.32 0.14 0.28 0.24 0.8 0.92 0.38 0.29 1.06
-5.31 -5.36 -8.13 -5.29 -6.27 -6.21 0.37 -5.25 -6.99 -5.28 -0.66 0.51 -0.31 -0.0 0.02 -0.58 0.93 -0.88 -0.01 0.42 -0.52 1.19 0.55 -0.3 0.12 0.81 0.75 0.71 1.17 1.04 0.81 0.65 1.13
-1.84 -2.05 -2.18 -1.94 -2.03 -1.44 0.45 -2.41 -2.36 -2.14 0.11 0.37 0.13 0.64 0.12 0.17 0.67 0.29 0.3 0.54 0.26 0.55 0.24 -0.87 0.72 0.29 0.33 0.22 0.48 0.62 0.29 0.34 0.65
-1.88 -1.93 -2.55 -2.49 -2.61 -2.18 -0.37 -2.96 -2.74 -1.67 0.9 -0.09 -0.12 0.08 0.38 0.81 0.21 0.78 0.61 0.59 0.5 0.32 -0.36 -1.35 0.01 0.36 0.45 0.19 0.59 0.99 0.55 0.47 0.69
-2.03 -1.67 -3.4 -2.98 -2.71 -2.13 -0.49 -2.99 -2.9 -2.97 0.13 0.28 -0.6 0.74 0.23 0.74 0.48 0.49 -0.06 0.73 0.14 0.66 0.05 -0.72 -0.32 0.5 0.6 0.93 0.5 0.64 0.71 0.84 0.57
-7.41 -6.42 -6.88 -7.04 -6.36 - 0.76 - - - -0.17 1.01 -0.41 0.65 0.06 -0.34 0.49 -1.0 -0.57 -0.56 0.09 0.69 0.31 0.09 -0.64 0.67 0.59 0.69 1.08 1.21 0.67 0.53 1.66
-3.73 -5.1 -4.38 -4.44 -2.7 - -1.28 -3.15 -4.06 -2.83 0.13 0.28 -0.44 0.09 -0.78 -0.24 0.74 -0.58 0.43 -0.33 -0.6 -0.22 1.03 -1.68 -0.29 0.83 0.86 0.81 1.12 1.58 0.73 0.47 1.87
-2.05 -2.59 -2.53 -2.29 -2.28 -2.34 0.08 -3.17 -2.93 -3.85 0.74 0.31 0.26 0.07 0.38 0.61 0.97 0.68 0.79 0.2 0.73 0.43 -0.12 0.16 0.34 0.32 0.55 0.14 0.29 0.39 0.09 0.15 0.24
-4.1 -3.92 -4.14 -4.43 -3.91 -3.82 -0.08 -5.23 -5.42 -5.29 0.34 0.03 0.23 0.17 0.34 0.45 0.84 0.37 0.36 0.55 0.54 0.27 -0.35 -0.2 -0.11 0.8 0.78 0.71 1.05 0.72 0.43 0.18 1.03
-5.46 -5.69 - -5.79 -6.47 -3.52 1.01 -3.75 - - -0.67 -0.14 0.41 0.65 0.49 -0.38 0.82 0.48 -0.53 0.29 0.07 0.28 1.21 0.51 0.06 0.54 0.69 0.52 0.56 0.55 0.48 0.47 0.86
-2.15 -2.17 -2.18 -2.16 -1.92 -1.6 0.08 -1.74 -1.93 -2.28 -0.26 0.47 0.4 0.23 0.63 0.48 0.76 0.36 0.37 0.29 0.41 0.63 0.31 0.28 0.5 0.01 0.29 -0.05 0.39 0.65 0.32 0.17 0.42
-3.09 -2.83 -3.25 -3.3 -3.27 -2.96 0.03 -3.94 -3.33 -3.69 0.81 0.32 0.11 0.32 -0.08 0.59 0.84 0.74 1.09 0.6 0.89 -0.07 -0.08 -0.8 0.64 0.35 0.45 0.14 0.49 0.59 0.19 0.03 0.52
-3.32 -3.1 -2.98 -3.94 -4.14 -3.49 0.47 -3.72 -4.71 -3.01 -0.42 0.52 0.15 0.19 -0.13 0.98 0.16 -0.22 0.27 -0.25 0.34 0.26 0.93 0.69 -0.06 0.55 0.63 0.42 0.98 0.85 0.41 0.21 0.95
-1.56 -1.34 -2.05 -1.91 -1.72 -0.91 -0.0 -1.91 -1.84 -0.76 0.1 0.74 0.11 0.89 0.03 0.45 0.59 0.36 0.36 0.71 0.27 0.65 0.45 -0.68 0.48 -0.06 0.3 -0.23 0.22 0.48 0.14 -0.11 0.29
-3.16 -4.45 -5.24 -5.93 -5.6 -5.19 0.36 -4.46 -5.59 -5.72 0.25 1.16 -0.26 0.22 0.93 0.38 0.4 0.35 0.38 0.24 0.28 0.86 0.82 -0.49 0.16 0.33 0.62 0.24 0.77 0.65 0.38 -0.09 0.66
-5.53 -4.62 -5.07 -4.14 -4.47 -4.67 -0.59 -4.89 -5.13 -4.98 0.61 0.04 0.15 -0.37 -0.1 0.41 0.99 0.34 0.84 0.56 0.9 -0.35 -0.45 -1.43 -0.15 0.46 0.87 0.46 0.7 1.11 0.68 0.64 1.39
-3.39 -8.41 -8.06 -5.87 -7.86 -6.62 -0.07 -4.69 -3.94 - -0.53 0.6 0.66 1.13 -0.18 0.96 0.68 0.52 0.62 0.35 0.6 0.71 0.89 0.35 -0.13 0.46 0.67 -0.06 0.35 0.53 0.06 -0.17 0.49
-1.15 -0.86 -1.22 -0.82 -0.82 -0.83 -0.63 -1.05 -1.11 -0.91 0.45 0.06 -0.08 -0.05 0.09 -0.0 0.45 0.46 0.27 0.1 0.09 0.03 0.07 -0.26 0.06 0.48 0.6 0.32 0.71 0.63 0.41 0.21 0.57
-2.27 -2.31 -2.63 -2.57 -2.08 -1.58 -0.67 -1.75 -1.91 -1.95 0.84 0.48 -0.97 0.66 0.67 0.59 0.62 1.13 0.85 0.66 0.75 0.18 -0.42 -1.17 -0.15 0.24 0.56 0.0 0.36 0.47 -0.02 -0.06 0.66
-2.39 -2.64 -2.78 -2.49 -2.62 -3.23 -0.23 -3.62 -4.05 -3.01 0.65 0.17 -0.42 0.35 0.47 0.8 0.32 0.81 0.66 0.63 0.64 0.16 -0.24 -1.09 0.13 0.35 0.44 0.56 0.74 0.67 0.53 0.54 0.68
-3.67 -4.58 -5.27 -6.81 -5.22 - 0.2 -5.8 -7.75 -3.91 0.14 0.96 0.42 0.34 0.53 0.44 1.04 0.57 -0.19 -0.43 0.71 0.51 -0.09 0.52 0.12 0.15 0.66 0.48 0.46 0.31 0.47 0.62 0.89
-2.33 -2.32 -2.84 -3.07 -2.59 -2.99 0.41 -3.61 -4.79 -3.27 -0.03 0.14 0.24 0.39 -0.04 0.91 0.71 0.29 0.32 0.22 -0.08 0.54 0.16 -0.46 0.53 0.45 0.48 0.49 0.83 0.68 0.43 0.44 0.91
-2.18 -2.2 -2.9 -2.69 -2.68 -2.85 0.21 -3.67 -3.92 -2.97 0.22 0.25 0.14 0.75 0.46 0.42 0.78 0.03 0.25 0.29 0.51 0.39 0.42 0.02 0.71 0.06 0.23 0.44 0.66 0.77 0.35 0.3 0.57
-2.97 -2.52 -3.33 -2.44 -3.0 -3.46 0.94 -4.42 -5.48 -3.86 -1.14 0.67 0.26 0.79 0.17 0.11 0.74 0.37 -0.03 0.13 -0.11 0.65 0.49 -0.71 0.67 0.59 0.71 0.04 0.72 0.86 0.33 0.33 0.77
-2.2 -2.0 -2.62 -2.7 -2.33 -2.19 -0.07 -2.35 -2.35 -2.59 0.8 0.43 0.26 0.59 0.03 0.85 0.12 0.83 0.75 0.7 0.58 0.34 0.42 -0.75 -0.02 0.12 0.26 -0.04 0.45 0.5 0.15 0.08 0.69
-1.83 -1.72 -1.71 -1.87 -1.5 -2.04 -0.08 -2.12 -2.02 -2.01 0.52 0.34 -0.04 0.29 0.7 0.35 0.32 0.8 0.38 0.47 0.05 0.41 0.13 -0.62 -0.14 0.45 0.35 0.18 0.61 0.63 0.39 0.39 0.67
-2.15 -2.23 -2.93 -2.82 -2.87 -3.25 0.74 -3.33 -3.11 -2.95 0.41 0.22 0.29 0.0 0.7 0.43 0.63 0.38 0.37 0.48 0.58 0.47 0.39 -0.3 0.55 0.17 0.41 0.33 0.54 0.49 0.43 0.14 0.43
-2.98 -2.82 -3.33 -3.14 -3.67 -3.33 0.69 -4.95 -5.35 -3.89 0.14 0.72 0.51 0.5 0.23 0.47 0.85 0.05 0.33 0.54 0.23 0.68 0.48 -0.12 0.69 0.19 0.28 0.24 0.63 0.57 0.08 -0.11 0.72
-0.86 -1.36 -1.54 -1.95 -1.65 -1.06 -0.73 -1.65 -1.45 -0.03 0.06 -0.25 -0.98 -0.04 0.09 -0.49 0.57 -0.2 -0.23 0.11 -0.1 0.08 -0.13 -1.34 -0.68 0.56 0.6 0.67 1.07 1.15 0.89 0.78 1.36
-1.39 -1.63 -1.47 -1.62 -1.21 -1.26 -1.02 -1.5 -1.83 -0.49 0.58 0.51 -0.29 -0.54 0.06 -0.4 0.56 -0.23 -0.2 -0.44 -0.42 -0.05 0.08 -1.26 0.48 0.65 0.69 0.62 0.97 1.06 0.69 0.57 1.2
-4.9 -4.33 -4.21 -5.76 -5.21 -6.56 -0.27 -5.57 -4.79 -5.27 0.72 0.31 0.32 -0.11 -0.79 0.44 0.83 0.45 0.82 0.47 1.01 0.37 0.46 -0.89 0.46 0.47 0.75 0.22 0.7 1.04 0.22 0.19 0.83

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.