Heatmap: Cluster_435 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Cambium and expanding xylem
Cambium
Expanding xylem
Expanding and mature xylem
Maturing xylem
Maturing xylem and dead early wood
Wood
Dead early and late wood
Dead early wood
Dead late wood
Vegetative shoots - needles
Vegetative shoots - stem
Vegetative shoots
Girdled twig - stem
Dried twig - needles
Girdled twig - needles
Needles
Needles - dawn
Needles - later afternoon
Needles - midday
Needles - night
Buds
Female flower
Male flower
Pineapple galls
Somatic germinants - abnormal type
Somatic germinants - normal type
Cell culture - H20 - 5 days
Cell culture - KI added - 5 days
Cell culture - KI added - 20 days
Cell culture - KI removed - 4 days
Cell culture - KI removed - 12 days
Cell culture - solid medium
-3.05 -3.85 -4.37 -4.19 -3.7 -3.4 0.72 -3.67 -4.11 -4.47 -0.4 0.05 -0.02 -0.89 -0.57 -0.95 0.98 -0.46 -0.87 -0.42 -0.75 0.45 0.6 -0.13 0.28 1.14 1.37 0.7 1.04 1.21 0.83 0.73 1.25
-3.43 -3.3 -4.18 -3.4 -3.86 -3.53 1.02 -4.5 -5.12 -4.33 -0.55 0.22 0.39 0.14 -0.15 -0.02 1.01 -0.19 -0.26 -0.02 -0.05 0.38 0.47 -0.26 -0.24 0.57 0.64 0.59 1.03 0.94 0.75 0.69 1.24
-3.14 -3.03 -2.45 -2.78 -2.35 -1.75 0.26 -2.94 -2.14 -3.02 -0.28 0.52 -0.33 0.1 0.41 -0.68 0.76 -0.59 -0.2 -0.37 -0.16 0.59 1.02 0.22 -0.0 0.66 0.76 0.76 0.97 0.89 0.57 0.36 1.03
-2.8 -3.18 -4.13 -3.74 -3.64 -3.4 0.19 -3.47 -4.15 -2.71 -1.08 -0.03 0.79 0.09 0.04 -0.03 0.96 -0.57 -0.58 -0.45 -0.25 0.67 0.6 1.05 0.36 0.28 0.65 0.87 0.86 0.97 0.76 0.76 0.71
-4.25 -5.11 -5.58 -6.21 -4.91 -6.19 0.64 -7.4 -6.79 - -1.19 -0.05 0.52 -0.08 0.03 -0.15 0.76 -0.84 -0.15 -0.4 -0.49 0.57 0.59 0.46 0.08 0.65 0.79 0.8 1.13 1.16 0.7 0.9 1.34
-2.22 -2.51 -3.08 -3.17 -3.66 -3.09 0.26 -3.79 -4.03 -3.94 -0.68 0.1 0.06 -0.46 0.55 -0.22 0.85 -0.49 0.11 -0.19 -0.0 0.09 0.43 0.38 -0.08 0.84 0.94 1.01 0.91 0.83 0.83 0.89 0.88
-2.33 -2.47 -2.84 -2.59 -2.65 -2.67 -0.73 -3.34 -3.66 -3.24 -0.37 -0.03 0.27 -0.28 0.15 -0.53 0.89 -0.32 -0.18 -0.05 -0.25 0.39 0.08 0.89 0.15 0.71 0.89 1.02 0.82 0.88 1.15 0.95 0.67
-3.87 -5.28 -5.38 -6.61 -4.56 -4.89 -0.15 -5.55 -7.47 -4.84 -0.48 0.53 0.56 0.57 0.11 0.17 0.69 -0.53 0.27 0.14 0.23 0.52 0.73 0.7 -0.04 0.43 0.75 0.54 0.83 0.8 0.71 0.5 0.96
-1.57 -2.03 -1.75 -1.95 -2.14 -1.74 0.97 -2.92 -4.21 -2.71 -1.19 0.86 0.37 0.47 -0.05 0.02 0.57 -0.35 -0.12 0.03 0.12 0.69 0.77 -0.2 0.16 0.28 0.57 0.19 0.75 0.75 0.28 0.42 0.82
-2.14 -2.85 -2.51 -2.22 -2.7 -3.25 0.33 -2.33 -3.49 -1.72 -0.07 0.49 0.42 0.4 0.59 0.16 0.76 -0.16 0.24 -0.18 -0.05 0.63 0.39 -0.36 0.21 0.29 0.49 0.22 0.88 0.89 0.62 0.44 0.76
-2.04 -2.31 -2.68 -2.69 -2.58 -3.61 0.54 -3.37 -3.51 -2.94 -0.59 -0.04 0.33 0.04 0.2 0.0 0.67 -0.01 0.04 -0.13 -0.11 0.45 0.85 0.75 -0.31 0.38 0.51 0.88 0.8 0.8 0.65 0.57 0.96
-2.89 -2.37 -2.51 -2.18 -2.6 -1.89 -0.4 -4.43 -3.45 -2.29 -0.58 0.31 0.23 -0.42 0.24 -1.07 1.16 -1.17 -0.55 -0.89 -1.12 0.16 -0.01 -0.56 0.61 0.99 1.19 0.87 0.95 1.15 1.04 0.79 1.34
-3.43 -4.29 -5.24 -5.89 -3.99 -6.64 0.63 -5.29 -5.0 -3.82 -1.01 0.38 0.5 0.7 -0.73 0.61 0.76 -1.29 -0.18 -0.22 -0.29 0.62 1.38 0.89 -0.1 0.09 0.45 0.7 0.98 0.9 0.46 0.47 0.89
-4.55 -5.07 -5.36 -4.5 -4.27 -4.73 0.18 -5.22 -4.96 -4.82 -1.33 0.64 -0.84 1.28 0.33 0.06 0.73 -0.69 -0.2 -0.31 -0.42 0.77 0.49 1.22 -0.73 0.93 0.84 0.63 0.44 0.91 0.81 0.43 1.0
-2.44 -2.57 -4.62 -3.62 -3.03 -3.02 -0.14 -4.31 -4.76 -5.58 -0.29 0.45 0.24 0.4 0.4 -0.67 0.94 -0.95 0.03 -0.21 -0.65 0.3 0.14 0.47 -0.35 0.77 1.0 0.88 1.13 1.03 0.85 0.75 0.95
-4.94 -5.49 -4.81 -5.67 -7.33 -5.89 0.47 - -6.38 - -0.23 0.78 0.52 0.2 -0.52 -0.65 0.58 -0.88 0.37 -0.14 -0.28 0.31 0.79 0.28 -0.1 0.29 0.65 0.99 1.16 1.06 0.86 0.76 1.15
-4.1 -4.61 -4.72 -4.89 -6.83 -5.08 0.69 - -9.5 -8.52 -0.84 0.42 0.55 0.4 -0.91 0.22 0.77 -1.56 -0.0 -0.13 -0.03 0.53 1.55 1.11 -0.07 0.17 0.32 0.61 0.87 0.78 0.58 0.64 0.91
-3.63 -3.24 -5.08 -3.03 -3.58 -6.4 0.07 -7.12 - -6.7 -0.77 -0.24 -1.02 0.63 -0.41 -0.37 1.43 -0.03 -0.74 -0.24 -0.61 0.49 0.24 -2.18 -0.61 1.0 1.4 0.85 1.42 1.32 0.86 0.39 1.32
-3.4 -4.93 -5.38 -4.65 -5.3 -4.48 -0.29 -6.14 -6.79 -7.0 -0.74 0.2 -0.58 1.78 -0.87 -0.24 0.79 -0.53 -0.38 -0.25 0.05 0.29 0.01 0.76 -0.48 1.11 0.92 0.86 0.44 0.86 0.71 0.7 1.39
-3.25 -3.86 -4.76 -4.7 -5.47 -6.29 0.55 -5.69 -6.25 -5.81 -0.32 0.36 0.17 0.17 0.03 -0.0 0.61 -0.35 0.03 0.13 -0.05 0.39 0.85 0.07 0.02 0.54 0.74 0.81 0.93 1.01 0.64 0.73 1.19
-2.53 -3.28 -1.94 -2.06 -3.3 -4.21 0.51 -7.68 -5.33 -5.32 -1.14 0.17 -0.27 -0.11 0.13 -1.11 1.08 -0.95 -1.04 -0.62 -0.53 0.34 0.24 -0.58 0.14 1.18 1.32 0.87 1.1 1.25 0.85 0.88 1.19
-4.42 -5.05 -4.49 - -4.73 - -0.11 -5.76 -7.9 -5.34 -1.47 -0.78 0.31 -0.47 -0.34 0.21 0.98 -0.78 -0.08 0.48 -0.75 0.53 0.59 0.46 -0.02 0.24 0.43 0.81 1.27 1.39 0.97 1.11 1.48
-3.89 -3.91 -3.68 -3.85 -4.42 -3.71 0.5 -4.71 -5.7 - -0.12 0.44 -0.1 0.49 -0.69 -0.43 0.83 -1.49 -0.57 -0.14 -0.15 0.33 0.74 -0.34 -0.14 0.61 0.74 0.98 1.38 1.17 1.01 0.54 1.28
-1.97 -2.29 -1.85 -1.52 -1.18 -1.12 0.54 -2.49 -2.16 -1.94 -0.74 -0.02 0.19 -0.03 -0.18 -0.47 0.62 -0.67 -0.39 -0.24 -0.3 0.32 0.68 0.26 -0.01 0.34 0.44 0.94 1.09 0.91 0.8 0.71 1.02
-4.74 -4.74 -4.59 -6.06 -6.27 -4.43 0.49 -6.43 -5.28 -4.73 -0.76 -0.25 0.49 -0.37 -0.12 0.21 1.04 -0.27 -0.31 0.18 -0.27 0.45 0.69 0.69 0.05 0.37 0.64 0.68 1.15 1.06 0.79 0.78 1.11
-2.56 -2.99 -2.81 -2.31 -2.45 -2.68 0.83 -3.19 -3.85 -3.12 -0.65 0.64 0.04 0.49 -0.48 -0.71 0.89 -1.45 -1.23 -0.82 -0.52 0.81 -0.26 -1.17 0.67 1.06 1.23 0.75 0.91 0.91 0.73 0.7 1.22
-1.9 -3.63 -1.46 -2.44 -3.17 -4.38 1.02 -3.08 -4.99 -5.29 -1.01 0.75 0.58 0.54 -0.33 -0.26 0.66 -0.82 0.05 0.49 0.13 0.66 0.58 -0.26 -0.03 0.04 0.36 0.58 0.89 1.08 0.46 0.29 1.03
-4.07 -6.32 -6.79 -5.71 -5.06 -5.06 0.27 -4.04 -5.19 -3.86 -0.29 0.44 0.46 0.58 -1.14 -0.42 0.84 -2.55 -0.17 0.04 -0.31 0.47 0.78 -0.22 -0.3 0.43 0.9 0.88 1.31 1.33 0.76 0.68 1.28
-3.59 -4.04 -3.78 -4.69 -5.9 -6.95 0.52 -7.65 -6.81 -5.8 -0.06 0.04 0.23 0.31 0.53 -0.33 1.11 -0.45 -0.28 -0.06 -0.01 0.49 0.43 -0.37 0.59 0.64 0.84 0.63 0.93 1.05 0.46 0.53 1.14
-5.66 -5.15 -5.49 -6.35 -8.02 -7.31 -0.06 -8.69 - -6.22 -0.98 0.07 0.2 -0.26 -0.38 -0.4 1.11 -0.99 -0.12 0.15 -0.18 0.45 0.8 0.52 -0.63 0.74 0.78 0.89 1.18 1.38 0.69 0.67 1.48
-2.84 -3.65 -2.88 -3.07 -2.51 -2.94 -0.42 -3.46 -3.59 -3.74 -0.19 -0.24 0.28 0.03 -0.29 0.28 0.83 -0.01 0.06 -0.18 -0.13 0.28 -0.07 0.27 0.05 0.53 0.69 0.86 1.14 1.13 1.0 0.92 1.05
-3.91 -4.32 -5.42 -4.68 -6.06 -5.15 0.58 -4.1 -6.42 -5.02 -0.34 0.07 0.04 -0.01 0.11 -0.07 0.76 -0.09 -0.37 -0.15 -0.15 0.24 0.71 0.3 0.2 0.52 0.72 0.84 1.05 1.09 0.86 0.63 1.3
-1.48 -2.35 -1.67 -1.4 -2.57 -2.76 0.58 -4.3 -4.52 -3.41 0.21 0.19 -1.01 0.71 -0.02 0.04 1.06 0.19 0.25 0.32 0.23 0.05 0.02 -2.49 -0.41 0.71 1.04 0.36 0.64 1.01 0.48 0.51 1.09
-1.37 -1.29 -1.73 -2.12 -1.42 -1.21 0.35 -1.12 -1.61 -1.43 -0.31 0.53 0.24 0.46 -0.29 -0.29 0.57 -0.08 -0.38 -0.4 -0.03 0.42 0.35 -0.3 -0.06 0.26 0.4 0.58 0.92 0.98 0.58 0.43 0.97
-5.52 -5.11 -7.38 -6.9 -6.77 -4.13 0.31 -4.99 -5.42 -4.58 -0.23 0.05 -0.09 0.07 -0.91 0.13 0.65 -0.48 0.16 0.05 -0.03 0.31 0.52 -0.14 -0.5 0.51 0.88 0.97 1.18 1.24 0.98 0.78 1.46
-2.55 -4.02 -4.18 -3.45 -4.94 - 0.6 -7.45 -5.52 - -1.47 0.08 -0.17 -0.72 -0.03 -0.66 1.09 -0.98 -1.3 -0.23 -0.63 0.42 0.46 -0.5 -0.36 0.95 1.13 0.96 1.38 1.08 1.09 1.02 1.5
-3.89 -4.51 -4.77 -4.95 -6.14 -5.79 0.87 -5.68 -4.83 -5.19 -1.57 0.44 0.49 -0.22 -0.17 -0.9 1.04 -1.09 -0.92 -0.84 -0.61 0.66 1.18 0.28 0.1 0.62 0.69 0.89 1.19 1.04 0.66 0.48 1.48
-5.97 -4.05 -6.76 -6.01 -5.85 -4.91 0.8 -6.08 -5.76 - -0.69 0.49 -0.08 0.0 -0.2 -0.64 0.98 -1.25 0.17 -0.28 -0.68 0.47 0.44 -0.05 0.1 0.81 0.71 0.95 1.0 1.31 1.06 0.83 1.13
-6.14 -5.4 -8.24 -5.25 -5.6 - -0.38 -8.29 - -7.88 -0.08 0.11 0.39 -0.24 0.18 -0.23 0.8 -0.78 0.21 0.2 0.23 0.12 0.46 1.3 -0.47 0.38 0.58 1.08 0.82 0.9 1.0 1.06 0.92
-1.46 -1.91 -1.25 -1.61 -1.12 -1.61 0.58 -1.91 -2.2 -2.91 -0.94 0.22 0.27 -0.09 0.2 -0.73 0.76 -0.64 -0.41 -0.51 -0.39 0.17 0.79 0.9 0.24 0.32 0.49 0.83 0.5 0.46 0.66 0.9 1.01
-5.7 -5.69 -6.77 -5.93 -7.21 -8.69 0.47 -8.28 - - -0.35 0.28 -0.23 0.56 0.39 -0.25 1.03 -0.88 -0.07 -0.43 -0.43 0.4 0.74 0.1 -0.01 0.54 0.63 0.99 1.12 1.13 0.98 0.68 1.04
-3.47 -4.4 -5.14 -4.85 -6.36 -7.55 0.61 -6.16 -8.83 - -1.2 -0.14 0.35 -0.41 -0.97 -1.23 1.05 -1.67 -2.16 -1.73 -2.09 0.53 0.72 -0.48 0.96 0.84 1.04 1.45 0.92 1.02 1.31 1.34 1.34
- -5.84 -7.16 - -9.03 -6.72 -0.18 -7.44 - - -1.95 -0.37 0.29 0.57 -0.06 -0.36 1.06 -2.43 -0.02 -0.36 -0.16 0.01 0.74 0.55 -0.18 0.06 0.59 1.13 1.52 1.35 0.97 0.69 1.55
-4.13 -4.18 -4.02 -4.69 -3.69 -4.34 -0.16 -5.04 -4.71 -4.01 0.33 -0.14 -0.59 -0.48 0.31 0.15 0.84 0.3 -0.04 -0.27 0.13 -0.11 0.04 -0.87 -0.24 0.64 0.81 0.84 1.3 1.3 1.04 0.91 1.34
-3.82 -4.6 -5.1 -5.72 -4.93 -5.38 0.65 - -7.03 -5.47 -0.4 0.36 -0.18 0.24 0.14 -0.93 0.78 -0.69 -0.8 0.03 -0.36 0.76 0.46 -0.67 0.01 0.77 0.91 1.02 1.26 1.2 1.09 0.54 1.11
-3.09 -2.81 -2.94 -2.71 -2.78 -2.93 0.41 -3.72 -3.81 -3.72 -0.16 0.35 0.4 0.34 -0.44 0.04 0.47 0.34 0.51 0.45 0.68 0.12 0.07 0.37 0.11 0.39 0.66 0.53 0.72 0.9 0.42 0.45 1.0
-2.02 -2.35 -2.71 -2.68 -4.01 -4.28 0.05 -5.46 -4.63 -5.09 0.31 0.14 -0.19 -0.01 -1.3 -0.45 1.23 -0.46 0.26 -0.03 -0.19 0.15 0.66 -1.98 0.97 0.89 0.97 0.59 0.96 1.07 0.66 0.7 1.05
-4.77 -5.96 -5.18 -5.49 -5.65 -5.78 0.89 -7.66 -6.43 -8.78 -0.92 0.55 0.42 -0.25 -0.35 -0.17 0.95 -0.81 -0.46 -0.61 -0.42 0.62 0.98 0.46 0.22 0.79 0.79 0.69 0.83 1.03 0.46 0.67 1.39
-3.62 -3.75 -4.77 -4.67 -5.1 -6.03 -0.18 - -7.79 -5.93 -0.34 0.77 -0.28 1.6 -1.17 0.41 0.68 -0.45 0.05 -0.26 -0.14 0.47 -0.39 1.16 0.01 0.99 0.83 0.48 0.17 0.63 0.69 0.59 1.16
-3.9 -3.88 -4.33 -3.53 -3.34 -5.33 0.45 -4.75 -4.53 -6.02 -0.26 0.04 0.22 0.27 0.08 -0.44 0.8 -0.15 -0.21 0.05 -0.12 0.23 0.36 -0.24 0.12 0.46 0.52 0.9 1.25 1.26 0.83 0.6 1.33
-6.83 -7.11 -8.63 -7.45 -9.25 -7.39 0.47 -5.37 -5.92 -7.6 -1.1 -0.14 0.09 0.31 -0.15 -0.31 0.92 -0.7 -0.09 0.1 -0.13 0.19 0.73 0.16 -0.56 0.63 0.88 0.87 1.24 1.29 0.72 0.62 1.54
-6.5 -7.11 -7.92 - -9.15 -8.6 0.67 - - -7.36 -0.91 0.22 0.29 -0.14 -0.44 0.19 0.74 -0.75 0.17 0.27 0.11 0.5 0.82 0.57 -0.35 0.42 0.63 0.83 1.15 1.06 0.56 0.57 1.38
-4.05 -4.81 - -4.69 -6.59 -5.39 0.67 - - - -1.22 0.13 0.26 0.13 -0.87 -0.44 0.97 -1.19 -0.83 -0.31 -0.74 0.61 1.09 -0.3 -0.14 0.64 1.09 0.86 1.15 1.15 1.04 0.77 1.42
-6.09 -6.55 -9.98 -7.39 -5.58 -5.85 -0.04 -6.04 -6.41 -4.52 -0.08 1.06 -0.17 0.06 0.35 0.14 0.56 0.24 0.18 0.17 0.06 0.32 0.11 -0.96 -0.18 0.66 0.77 0.98 0.8 0.95 0.81 0.94 1.19
-1.09 -1.3 -1.59 -2.19 -1.97 -1.54 -0.3 -1.59 -1.43 -2.08 -0.79 0.19 0.0 -0.08 -0.24 -0.37 1.23 -0.84 -0.38 -0.33 -0.27 0.05 -0.18 -0.61 -0.57 1.02 1.3 0.54 0.9 1.1 0.96 0.65 0.93
-2.34 -2.16 -2.69 -3.07 -2.99 -2.87 -0.2 -3.07 -3.04 -3.06 -0.32 -0.21 0.66 0.34 -0.21 0.01 0.77 -0.12 0.01 0.06 0.24 0.14 0.44 0.5 -0.35 0.33 0.59 0.69 1.09 1.16 0.63 0.61 1.08
-2.78 -3.08 -3.79 -3.8 -4.31 -5.62 0.66 -7.92 -6.2 -5.3 -0.44 0.34 0.68 0.15 -0.43 0.2 0.62 -0.24 0.21 -0.0 -0.07 0.55 0.85 0.6 -0.07 0.36 0.61 0.7 0.79 0.88 0.54 0.64 1.04
-2.95 -3.71 -4.76 -3.75 -4.68 -3.64 0.4 -3.92 -5.2 -4.28 -0.76 -0.08 0.03 -0.27 -0.99 -0.39 1.27 -1.63 -0.58 -0.23 -0.71 0.2 0.45 -0.26 0.32 0.79 0.96 1.02 1.03 1.34 1.05 1.02 1.38
-1.93 -2.04 -2.25 -3.04 -2.69 -2.44 -0.1 -3.1 -2.93 -2.03 -0.39 0.48 0.58 -0.22 0.29 -0.21 0.34 0.2 0.85 0.55 0.64 0.42 0.23 -0.01 0.29 0.38 0.48 0.47 0.89 0.71 0.52 0.26 0.69

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.