Heatmap: Cluster_399 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Cambium and expanding xylem
Cambium
Expanding xylem
Expanding and mature xylem
Maturing xylem
Maturing xylem and dead early wood
Wood
Dead early and late wood
Dead early wood
Dead late wood
Vegetative shoots - needles
Vegetative shoots - stem
Vegetative shoots
Girdled twig - stem
Dried twig - needles
Girdled twig - needles
Needles
Needles - dawn
Needles - later afternoon
Needles - midday
Needles - night
Buds
Female flower
Male flower
Pineapple galls
Somatic germinants - abnormal type
Somatic germinants - normal type
Cell culture - H20 - 5 days
Cell culture - KI added - 5 days
Cell culture - KI added - 20 days
Cell culture - KI removed - 4 days
Cell culture - KI removed - 12 days
Cell culture - solid medium
-0.72 -0.93 -1.67 -1.56 -1.53 -1.12 -0.01 -1.56 -0.9 -1.07 -0.49 0.3 0.62 0.13 -0.18 -0.17 -0.23 -0.82 -0.58 -0.41 -0.26 0.61 0.99 0.38 -0.41 0.11 0.18 0.71 1.02 0.9 0.82 0.25 0.84
-0.36 -0.32 -1.18 -1.97 -1.53 -0.92 0.16 -1.48 -1.24 -2.16 -0.9 0.16 0.02 -0.2 0.01 -0.85 -0.72 -0.36 -0.5 -0.85 -0.41 0.21 0.65 0.55 0.33 -0.03 0.01 0.95 1.41 1.07 0.89 0.44 0.92
-1.14 -1.1 -1.51 -1.56 -1.88 -1.87 0.58 -1.91 -1.97 -0.84 -0.32 0.29 0.3 0.05 -0.33 -0.65 -0.97 -0.85 -0.8 -0.19 0.04 0.16 -0.02 0.51 -0.29 0.1 0.15 0.97 1.33 1.0 0.69 0.78 1.43
-0.97 -0.9 -1.71 -1.56 -1.5 -0.97 -0.56 -1.09 -1.3 -0.62 -0.3 -0.06 0.56 0.06 -0.23 -0.66 0.05 -0.53 -0.63 -0.63 -0.49 0.14 0.25 -0.24 -0.57 0.14 0.39 0.55 1.11 1.47 0.83 0.53 1.53
-0.99 -0.4 -2.37 -2.01 -2.06 -1.29 0.15 -1.85 -1.84 -2.45 -0.49 -0.4 0.3 0.31 -0.71 -0.46 -0.19 -0.52 -0.66 -1.02 -0.69 0.03 0.82 1.25 -1.12 -0.01 0.27 0.92 1.38 1.21 0.87 0.58 1.17
-0.89 -0.71 -0.92 -0.86 -0.88 -0.16 0.18 -0.72 -0.68 -0.21 -0.54 0.16 0.26 0.45 -0.32 -0.31 -0.24 -0.58 -0.46 -0.32 -0.39 0.23 0.08 0.21 -0.72 0.24 0.36 0.4 0.9 0.93 0.56 0.34 1.01
-1.27 -1.11 -2.17 -2.44 -2.39 -1.67 -0.13 -2.32 -2.52 -1.56 -0.19 0.05 -0.47 0.45 -0.43 -0.33 -0.46 -0.09 -0.36 -0.21 -0.44 0.08 0.7 -0.02 -0.71 0.35 0.17 0.84 1.49 1.44 0.83 0.45 1.51
-0.88 -1.39 -1.71 -2.12 -1.81 -1.68 -0.07 -1.46 -1.72 -1.71 -0.33 0.03 0.11 0.19 -0.67 -0.18 0.02 -0.46 -0.15 -0.21 0.06 0.03 0.76 0.37 -0.9 0.09 0.17 0.82 1.38 1.28 0.66 0.25 1.4
-0.84 -0.53 -2.46 -2.68 -2.12 -1.33 0.05 -3.53 -2.48 -2.58 -1.18 -0.17 1.21 0.38 -1.19 -1.07 -0.34 -0.25 -0.73 -1.29 -0.72 0.38 0.86 1.42 -1.13 0.25 0.49 0.23 1.27 1.36 0.9 0.39 1.03
-1.04 -0.79 -1.71 -1.7 -2.05 -2.37 0.46 -2.28 -2.36 -2.64 -0.12 -0.03 0.52 0.22 -0.56 0.03 -0.03 -0.12 -0.28 -0.39 -0.12 0.35 0.82 0.86 -0.11 0.13 0.14 0.65 1.06 0.97 0.66 0.42 0.89
-0.42 -0.84 -1.48 -1.93 -1.42 -0.91 -0.01 -1.76 -1.62 -1.53 -0.58 -0.21 -0.1 0.02 -0.76 -0.98 0.04 -1.34 -1.17 -0.94 -1.18 0.28 0.73 0.6 -0.17 0.35 0.37 0.88 1.34 1.26 0.92 0.77 1.37
-3.42 -2.5 -4.63 -3.34 -5.97 -3.33 -0.93 -4.34 -3.18 -7.7 -0.8 -0.52 0.51 0.26 -1.65 -0.46 0.13 0.31 -1.19 -0.4 -0.33 -0.21 0.3 0.17 -0.77 -0.22 -0.09 1.4 2.16 1.51 1.23 0.79 1.52
-0.6 -0.37 -1.36 -1.52 -1.73 -1.3 0.39 -1.33 -1.92 -0.98 -0.28 0.47 0.68 0.34 -0.57 -0.21 0.09 -0.18 -0.47 -0.71 -0.63 0.47 0.73 0.7 0.2 0.1 0.19 0.47 0.8 0.64 0.45 0.21 0.9
-0.8 -0.37 -1.53 -1.44 -0.99 -0.77 0.16 -0.98 -1.11 -1.31 -0.67 -0.08 0.46 0.2 -0.36 -0.22 -0.13 -0.76 -0.66 -0.44 -0.63 0.24 0.82 0.5 -0.71 0.1 0.19 0.47 1.28 1.21 0.51 0.35 1.07
-1.52 -2.08 -2.53 -2.37 -2.3 -1.64 -0.03 -2.58 -2.83 -2.09 -0.31 0.31 -0.04 0.66 -0.24 -0.08 -0.61 0.02 -0.47 -0.39 -0.38 0.43 -0.25 -0.06 -0.75 0.23 0.22 0.86 1.59 1.44 1.01 0.67 1.31
-0.77 -0.45 -0.88 -1.07 -1.32 -1.24 0.34 -1.33 -1.57 -1.91 -0.74 -0.29 0.59 0.21 -0.21 -0.42 0.13 -0.41 -0.53 -0.61 -0.55 0.1 0.33 1.09 -0.71 -0.04 0.01 0.71 1.2 0.96 0.85 0.59 0.81
-1.86 -2.21 -3.42 -2.84 -3.13 -3.3 -0.92 -3.93 -3.03 -3.45 -0.79 -0.25 -0.19 -0.12 -0.06 -0.23 0.04 -0.93 0.27 0.03 0.03 0.17 0.67 -0.51 -0.26 0.13 0.31 1.21 1.35 1.45 1.29 1.22 1.3
-2.01 -1.69 -4.05 -3.14 -4.23 -4.85 -0.51 -3.77 -3.35 -6.74 -0.12 -0.26 0.05 0.16 -0.52 -0.59 0.16 -0.49 0.49 0.21 0.41 0.42 0.62 0.3 -1.18 0.43 0.33 1.19 1.47 1.31 1.12 0.68 0.9
-0.5 -0.48 -0.85 -0.97 -0.82 -0.61 -0.16 -1.08 -1.21 -1.37 -0.16 -0.07 0.2 0.01 -0.23 0.08 -0.28 -0.1 -0.31 -0.4 -0.39 -0.01 0.2 0.14 -0.22 0.04 0.19 0.67 1.08 1.1 0.53 0.35 1.17
-1.58 -1.17 -1.61 -1.15 -0.92 -0.28 -0.4 -1.01 -0.98 -0.03 -0.18 0.32 0.12 0.4 -0.5 -0.4 0.29 -0.51 -0.43 -0.52 -0.42 0.23 0.5 -0.19 -0.46 0.14 0.43 0.43 1.16 1.17 0.45 0.32 1.11
-0.75 -0.53 -1.79 -1.45 -1.48 -0.69 -0.04 -1.33 -1.13 -0.53 -0.21 -0.05 -0.05 0.51 -0.09 -0.28 -0.09 -0.24 -0.26 -0.16 -0.27 0.18 0.37 -0.4 -0.79 0.34 0.32 0.52 1.18 1.08 0.54 0.48 1.2
-0.94 -0.22 -1.88 -2.22 -1.95 -1.67 0.15 -2.26 -2.92 -4.4 -1.97 -0.18 1.06 0.04 -1.92 -1.75 0.03 -0.46 -2.77 -1.87 -1.18 0.82 0.87 1.92 -1.45 -0.1 0.37 0.21 1.36 1.37 0.78 0.15 1.34
-0.32 -0.3 -0.61 -0.7 -0.7 -0.14 0.21 -0.71 -0.86 -0.64 -0.48 0.25 0.07 0.37 -0.61 -0.56 0.03 -0.64 -0.57 -0.73 -0.61 0.51 0.35 0.08 -0.14 0.19 0.35 0.45 0.77 0.85 0.5 0.33 0.87
-1.27 -1.24 -2.0 -2.14 -1.75 -2.18 0.67 -1.88 -2.52 -2.46 -0.62 0.18 0.17 0.17 -0.54 -0.31 0.08 -1.27 -0.72 -1.41 -0.52 0.43 0.46 -0.03 -0.11 0.1 0.19 0.87 1.52 1.28 0.94 0.71 1.46
-0.58 -0.33 -1.04 -1.12 -1.1 -0.74 0.33 -0.79 -0.72 -0.93 -0.44 0.25 0.34 0.27 -0.53 -0.15 -0.28 -0.25 -0.42 -0.4 -0.4 0.37 0.48 0.47 -0.52 -0.06 0.07 0.47 1.18 1.05 0.21 0.18 0.89
-1.95 -1.01 -4.06 -3.81 -3.95 -3.64 -1.03 -4.01 -3.88 -2.91 -0.87 -0.16 0.66 -0.01 -1.83 -0.83 -0.1 -0.82 -0.7 -0.63 -0.68 0.12 0.96 1.17 -0.67 -0.05 -0.02 0.79 1.98 1.86 0.87 0.48 1.37
-0.92 -0.54 -1.32 -1.9 -1.75 -1.62 -0.05 -1.75 -1.67 -1.82 -0.71 0.05 -0.09 0.2 -0.74 -0.64 -0.11 -0.54 -0.66 -0.37 -0.47 0.2 0.85 0.61 -0.82 0.47 0.29 0.79 1.32 1.24 0.79 0.65 1.24
-1.54 -1.58 -2.94 -3.87 -3.55 -2.92 -0.22 -4.16 -3.52 -2.56 -0.29 -0.15 0.24 -0.11 -1.22 -0.42 0.17 -0.64 -0.39 -0.6 -1.34 0.13 0.59 1.21 -0.59 0.18 0.21 1.09 1.85 1.46 0.86 0.34 1.43
-0.94 -0.46 -1.08 -1.2 -1.33 -1.09 0.23 -1.18 -1.36 -0.83 -0.21 -0.04 0.03 0.47 -0.53 -0.45 -0.01 -0.08 -0.21 -0.44 -0.29 0.01 0.35 0.46 -0.68 -0.21 -0.01 0.7 1.21 1.16 0.56 0.18 1.31
-1.6 -1.53 -2.47 -1.99 -2.08 -2.02 -0.16 -2.78 -2.88 -1.87 -0.37 -0.01 -1.04 -0.05 -0.2 -0.41 -0.39 -0.51 -0.27 0.04 -0.1 -0.16 0.18 -0.51 -0.38 0.16 0.26 1.26 1.73 1.39 1.11 0.81 1.48
-1.04 -1.08 -1.42 -0.98 -1.05 -0.55 -0.21 -1.65 -1.28 -1.29 -1.09 -0.1 0.65 -0.22 -0.29 -0.7 -0.16 -1.28 -1.3 -1.31 -1.25 0.43 0.63 0.99 -0.14 0.21 0.23 0.82 1.44 1.21 0.75 0.63 1.04
-1.0 -0.47 -1.54 -1.27 -2.03 -2.31 0.59 -2.01 -2.04 -1.53 -0.85 0.38 0.57 0.64 -0.79 -0.69 -0.31 -0.81 -0.76 -0.7 -0.79 0.59 0.97 0.68 -0.64 0.12 0.15 0.62 1.16 1.08 0.73 0.44 1.11
-1.21 -0.72 -2.14 -2.11 -1.94 -1.3 0.01 -1.63 -1.8 -1.4 -0.22 0.46 0.38 0.43 -0.51 -0.69 0.25 -0.54 -0.29 -0.23 -0.31 0.57 0.94 0.33 -0.34 0.26 0.46 0.43 0.99 1.17 0.44 0.19 1.13
-1.41 -1.05 -1.84 -1.36 -1.63 -1.15 0.19 -0.97 -1.24 -0.99 -0.18 0.24 0.26 0.52 0.22 -0.44 -0.27 0.04 -0.15 0.06 -0.3 0.47 0.35 0.04 -0.44 0.11 0.27 0.68 0.78 0.92 0.73 0.52 0.91
-0.51 -0.97 -1.54 -2.02 -2.31 -1.99 -0.36 -2.06 -2.08 -2.26 0.03 -0.2 0.11 0.17 -1.39 0.12 0.11 -0.36 -0.4 -0.42 0.07 -0.01 0.86 0.19 -0.34 0.48 0.51 1.08 1.26 0.87 1.02 0.7 0.81
-0.56 -1.33 -1.26 -2.05 -1.62 -2.04 0.18 -1.82 -1.95 -2.16 -0.66 -0.04 -0.01 -0.21 -0.29 -0.04 -0.34 -1.01 -0.36 -0.57 -0.36 0.24 0.71 0.78 -0.3 0.46 0.29 0.91 1.29 1.14 0.84 0.64 1.14
-0.65 -0.6 -0.43 -0.67 -1.25 -1.23 -0.04 -2.03 -1.96 -1.62 -0.76 -0.82 0.38 -0.46 -0.28 -0.55 0.5 -0.73 -0.73 -0.31 -0.44 -0.22 0.49 0.45 -0.71 -0.08 0.11 1.07 1.27 1.12 1.02 0.76 1.12
-0.4 -0.47 -1.24 -1.43 -1.43 -1.41 -0.35 -1.36 -1.39 -1.37 -0.13 -0.31 0.25 0.19 -0.28 -0.23 0.01 0.09 -0.11 -0.4 -0.13 0.06 0.5 0.37 -0.48 0.24 0.2 0.77 1.08 0.99 0.82 0.51 0.89
-0.85 -0.86 -1.23 -1.32 -1.5 -1.53 -0.44 -1.78 -2.04 -1.48 -0.65 0.04 0.35 -0.14 0.01 -0.25 -0.35 -0.74 -0.33 -0.73 -0.57 -0.02 0.1 1.07 -0.32 0.38 0.27 0.86 1.25 1.18 0.8 0.79 1.14
-0.43 -0.3 -1.4 -1.55 -1.91 -2.54 0.51 -3.14 -3.13 -3.28 -0.67 -0.13 0.45 0.32 -0.24 -0.79 -0.11 -0.35 -0.53 -0.56 -0.46 0.3 0.83 1.5 -0.77 0.1 0.24 0.67 1.28 0.99 0.37 0.09 1.07
-0.78 -0.62 -1.53 -1.56 -1.27 -0.72 -0.03 -1.25 -1.27 -1.23 -0.39 -0.03 0.3 0.08 -0.66 -0.33 0.14 -0.48 -0.5 -0.56 -0.47 0.17 0.47 0.61 -0.43 0.08 0.27 0.58 1.16 1.27 0.74 0.41 1.16
-1.6 -1.63 -2.72 -2.66 -2.52 -2.84 -0.1 -3.23 -3.82 -2.88 -0.42 -0.36 -0.25 -0.25 -0.25 0.01 -0.42 -0.77 -0.63 -0.58 -0.32 0.0 0.12 -0.36 -0.21 0.1 0.24 1.31 1.63 1.5 1.35 1.03 1.58
-1.12 -1.19 -2.06 -1.73 -1.15 -1.09 -0.05 -0.78 -0.59 -1.27 0.09 0.12 0.03 0.18 -0.29 -0.42 -0.42 -0.18 -0.45 -0.08 -0.13 0.37 -0.07 0.04 -0.52 0.18 0.36 0.73 1.15 1.12 0.81 0.6 1.15
-1.33 -0.68 -2.54 -2.43 -2.23 -1.49 -0.33 -2.15 -2.66 -1.55 0.04 0.35 -0.07 0.4 -0.23 0.59 -0.32 0.04 -0.01 -0.09 -0.19 0.26 0.32 -1.89 -0.34 0.35 0.17 0.53 1.19 1.43 0.93 0.42 1.25
-0.9 -0.95 -2.09 -2.6 -3.27 -3.56 0.61 -2.39 -3.0 -2.35 -0.81 0.3 0.15 0.37 -1.36 -0.8 -0.05 -1.26 -1.12 -1.07 -1.04 0.42 0.68 0.33 -0.23 0.22 0.14 0.68 1.75 1.6 0.64 0.32 1.7
-2.47 -2.07 -3.35 -3.79 -3.0 -2.58 0.34 -2.94 -3.45 -2.88 -0.28 0.58 -0.52 0.74 -1.04 -0.12 -0.49 -0.03 -0.29 -0.51 -0.44 0.61 0.11 -0.14 -0.49 0.52 0.34 0.92 1.16 1.53 0.85 0.8 1.57
-0.85 -0.76 -1.19 -1.31 -1.63 -1.42 0.4 -1.97 -2.12 -1.89 -1.78 -0.21 0.68 -1.15 -0.37 -1.47 0.15 -1.8 -2.0 -2.21 -1.78 0.23 0.8 1.52 0.04 0.21 0.31 0.64 1.54 1.44 0.75 0.18 1.35
-0.76 -0.43 -0.92 -0.64 -0.86 -0.81 0.21 -0.73 -0.88 -0.64 -0.32 0.37 0.21 0.04 -0.43 -0.22 0.27 -0.33 -0.15 -0.35 -0.19 0.45 0.44 -0.21 0.15 0.18 0.26 0.36 0.73 0.81 0.42 0.17 0.85
-1.3 -1.19 -1.58 -2.28 -1.75 -1.67 -0.39 -1.5 -1.48 -1.43 -0.37 -0.11 0.12 -0.4 -0.44 -0.13 -0.52 -0.58 -0.29 -0.36 -0.41 -0.09 1.27 0.58 -0.14 0.21 -0.08 0.76 1.38 1.34 0.96 0.34 1.23
-0.97 -0.99 -1.55 -2.06 -1.74 -1.57 0.49 -1.95 -2.24 -1.58 -0.19 0.18 -0.73 0.48 -0.06 -0.13 -0.19 0.34 -0.04 0.14 -0.04 0.19 0.6 -1.01 -0.32 0.32 0.19 0.94 1.35 0.87 0.83 0.5 0.75
-0.77 -0.67 -1.93 -2.26 -2.51 -2.28 0.24 -2.42 -2.28 -2.93 -0.85 0.19 -0.08 0.43 -0.39 -0.64 -0.37 -0.42 -0.53 -0.44 -0.62 0.62 0.72 0.34 0.46 0.09 0.11 1.08 1.4 1.13 0.96 0.51 0.96
-0.5 -0.28 -1.04 -1.71 -1.31 -0.48 -0.11 -2.3 -1.45 -2.06 0.09 -0.49 0.55 0.34 -0.99 -0.56 0.18 -0.43 -0.16 -0.45 -0.13 0.05 0.52 0.94 -0.58 -0.06 0.14 0.7 1.25 0.91 0.44 0.32 1.08
-0.73 -0.81 -1.81 -2.75 -1.83 -2.01 -0.23 -2.19 -2.35 -1.96 -0.42 -0.03 -0.5 0.07 -0.29 -0.81 -0.09 -0.37 -0.39 -0.49 -0.6 0.21 0.2 -0.5 -0.77 0.24 0.32 1.16 1.43 1.47 1.3 0.93 1.33
-0.61 -0.69 -1.06 -1.31 -0.87 -0.68 0.68 -1.12 -0.63 -1.19 -0.26 0.28 0.23 0.03 -0.23 -0.37 -0.37 0.11 -0.23 -0.45 -0.16 0.07 0.16 0.22 -0.4 0.08 0.11 0.61 0.93 0.9 0.74 0.25 0.96
-0.63 -0.69 -1.31 -1.61 -1.6 -1.04 -0.08 -1.51 -1.86 -0.67 -0.16 0.11 0.29 0.35 -0.87 -0.51 -0.11 -0.26 -0.74 -0.8 -0.49 0.07 0.53 0.02 -0.66 0.26 0.36 0.48 1.37 1.33 0.68 0.5 1.31
-2.47 -2.28 -3.96 -2.73 -2.85 -1.99 -0.63 -3.33 -2.65 -2.16 -0.73 0.18 0.02 -0.48 -0.71 -0.31 -0.22 -0.92 -0.64 -0.29 -0.33 -0.68 -0.51 -0.44 -0.41 0.12 0.15 1.33 1.76 1.62 1.38 1.22 1.78
-0.82 -0.77 -1.25 -1.56 -1.39 -0.53 0.16 -1.14 -0.89 -1.11 -0.46 0.39 0.04 0.45 -0.27 -0.4 0.31 -0.19 -0.28 -0.26 -0.3 0.23 0.62 -0.37 -0.22 0.21 0.38 0.41 1.03 1.1 0.58 0.3 0.83
-0.67 -0.59 -1.24 -1.56 -1.17 -0.75 0.27 -0.84 -1.09 -2.01 -0.76 0.06 0.12 0.03 -0.55 -0.89 0.02 -0.91 -0.52 -0.97 -0.46 0.43 0.48 0.57 -0.15 -0.03 0.04 0.84 1.34 1.2 0.7 0.4 1.18

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.