Heatmap: Cluster_385 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Cambium and expanding xylem
Cambium
Expanding xylem
Expanding and mature xylem
Maturing xylem
Maturing xylem and dead early wood
Wood
Dead early and late wood
Dead early wood
Dead late wood
Vegetative shoots - needles
Vegetative shoots - stem
Vegetative shoots
Girdled twig - stem
Dried twig - needles
Girdled twig - needles
Needles
Needles - dawn
Needles - later afternoon
Needles - midday
Needles - night
Buds
Female flower
Male flower
Pineapple galls
Somatic germinants - abnormal type
Somatic germinants - normal type
Cell culture - H20 - 5 days
Cell culture - KI added - 5 days
Cell culture - KI added - 20 days
Cell culture - KI removed - 4 days
Cell culture - KI removed - 12 days
Cell culture - solid medium
-0.84 -0.91 -1.23 -1.38 -1.58 -1.0 0.28 -1.8 -1.83 -1.78 -1.12 0.47 1.69 0.34 -1.74 -1.3 1.28 -1.56 -1.29 -1.28 -1.44 1.32 0.53 1.18 1.94 -0.27 -0.22 -1.07 0.23 0.34 -0.96 -1.29 0.69
-1.54 -1.16 -1.68 -1.54 -1.52 -2.08 -0.56 -2.67 -2.97 -2.5 -4.53 0.67 1.01 1.41 -5.23 -4.72 1.79 -5.32 -8.51 -6.77 -6.55 1.72 1.26 -0.92 1.76 0.99 0.92 -0.5 0.52 0.57 -0.26 -0.84 0.55
-2.18 -2.08 -2.47 -1.26 -0.63 -0.07 1.02 -2.28 -3.29 -2.78 0.51 0.41 1.98 0.66 -2.18 0.1 1.45 -0.77 -0.95 -0.68 -0.92 1.75 1.72 -0.76 1.38 -0.43 0.21 -2.71 -2.48 -1.54 -1.95 -1.87 -1.49
-2.16 -2.01 -2.19 -2.13 -1.68 -1.23 -1.06 -2.44 -2.98 -3.06 0.07 0.1 1.12 -0.16 -0.17 0.23 1.75 -0.09 -0.12 -0.28 -0.13 0.99 1.21 0.52 1.5 0.84 0.77 -1.52 -0.78 0.0 -1.26 -1.02 0.39
- - - - - - -8.45 - - - -0.55 -0.76 2.13 0.26 -2.17 -1.61 2.62 -1.2 -1.55 -1.22 -1.28 1.26 -0.79 0.28 2.29 1.92 1.79 -2.88 -6.22 -3.75 -7.29 -4.29 0.31
-2.71 -3.13 -2.87 -2.72 -2.83 -2.67 -2.1 -3.71 -4.03 -3.54 0.88 0.94 1.39 -0.24 -0.18 0.68 1.42 0.33 0.22 0.26 0.17 0.4 0.16 -1.34 1.94 0.15 0.6 -1.77 -0.28 0.57 -1.53 -1.35 0.94
-5.53 -6.41 -3.94 -3.46 -6.01 -6.85 -4.28 -6.55 -6.38 - 1.78 -2.13 1.82 -1.53 -0.97 0.77 1.54 0.54 0.49 -0.87 0.27 -1.06 -0.17 -3.46 1.95 -0.2 -0.12 0.47 0.46 0.4 0.62 0.39 0.49
-4.51 -3.68 -4.74 -3.09 -3.04 -2.44 -2.42 -4.12 -5.07 -2.5 -0.46 1.11 0.95 2.32 -4.38 -0.87 1.53 -1.57 -0.98 -2.42 -2.28 -0.32 -1.51 0.72 2.28 -0.98 -0.5 -1.17 1.51 0.38 -1.6 -1.87 1.74
-1.11 -0.37 -2.6 -3.25 -4.28 -3.95 0.45 -5.11 -5.27 -6.32 -1.71 1.1 1.42 1.28 -5.38 -1.85 1.96 -2.45 -2.9 -3.25 -3.34 0.76 1.23 0.58 2.45 0.87 0.85 -1.94 -1.24 -0.64 -2.28 -1.4 0.21
-1.05 -1.19 -1.47 -1.26 -0.95 -1.25 -0.03 -2.19 -1.76 -2.15 -0.18 0.49 1.4 0.24 -0.44 -0.34 1.04 -0.78 -1.14 -1.5 -1.84 1.0 0.62 1.2 1.51 0.02 0.32 -0.14 0.23 0.24 -0.4 0.0 0.4
- - - - -5.78 - - - -3.99 -5.0 1.73 - 2.44 - -0.98 0.25 2.84 1.69 1.26 0.43 1.27 - - - 1.9 -0.9 0.73 - - - - - -
-0.9 -0.91 -1.39 -1.37 -1.2 -0.75 0.9 -1.43 -1.5 -1.22 0.22 0.24 0.64 0.2 -1.75 -0.49 0.93 -0.28 -0.25 -0.56 -0.21 0.11 0.53 -1.03 1.21 0.32 0.57 0.06 0.54 0.73 0.07 -0.03 0.74
-1.13 -1.16 -1.71 -2.12 -1.96 -1.14 0.17 -2.4 -2.32 -2.92 1.18 -0.51 1.09 -1.46 -1.89 -0.69 1.21 -0.9 -1.25 -1.36 -1.02 0.24 0.32 1.81 1.18 0.37 0.72 0.32 0.14 0.27 0.28 0.46 0.51
-1.12 -1.08 -1.4 -0.79 -0.87 -0.03 -0.06 -3.28 -2.87 -1.33 -1.53 1.23 1.16 -0.2 -0.44 -2.06 1.36 -5.58 -1.75 -1.88 -3.05 0.13 1.23 0.57 2.34 -0.63 -0.18 -1.71 0.63 1.06 -1.31 -1.34 0.75
-0.73 -0.86 -1.63 -2.63 -1.89 -1.88 1.29 -0.87 -1.44 -3.02 -0.37 1.19 1.04 0.63 -2.66 -2.28 1.62 -1.33 -2.19 -2.28 -1.92 1.04 0.65 -0.18 1.44 0.31 0.54 -0.29 0.04 0.32 -0.38 -0.11 0.55
-6.61 - -6.66 -5.99 -8.54 - -5.68 -7.98 - - 1.8 -1.83 1.78 -3.37 -0.17 1.24 1.69 0.7 0.79 -0.37 0.73 -1.32 0.06 -3.33 2.18 -0.21 0.08 -0.05 -0.29 -0.21 0.09 -0.37 -0.12
-1.61 0.02 -2.39 -1.79 -1.55 -2.06 -0.38 -2.28 -1.53 -1.81 -1.32 1.42 1.66 0.52 -3.29 -2.06 2.4 -1.91 -2.32 -1.81 -1.99 0.15 1.67 -0.7 1.9 1.13 1.38 -3.1 -2.24 -1.62 -3.13 -2.96 -1.49
-0.53 -0.46 -0.69 -1.01 -1.15 -0.81 0.8 -1.81 -1.93 -2.1 -0.75 0.74 0.93 0.48 -1.25 -0.83 1.48 -1.07 -1.33 -1.21 -1.25 1.0 0.71 -0.48 1.8 0.82 0.99 -0.88 -0.75 -0.51 -0.89 -0.27 0.08
-1.2 -0.9 -1.5 -1.42 -1.49 -1.51 1.24 -1.83 -1.71 -2.61 -0.34 1.37 1.04 0.66 -0.71 -0.45 1.32 -0.42 -0.05 -1.05 -0.28 0.86 1.11 -0.18 1.64 -0.21 -0.01 -2.12 -0.71 0.12 -1.54 -1.62 0.23
-2.95 -2.37 -3.44 -4.08 -3.59 -3.2 0.97 -7.6 -3.24 -3.0 -0.7 1.46 1.21 1.3 -2.12 -0.17 1.8 -0.75 -0.27 -0.41 -0.64 0.47 1.47 0.5 1.42 -0.3 0.06 -1.42 -0.1 0.38 -0.97 -1.6 0.03
-2.25 -1.69 -3.81 -3.34 -2.17 -1.6 0.98 -1.47 -2.6 -2.75 -0.95 0.83 1.9 0.09 -1.93 -0.89 1.55 -1.14 -1.36 -1.93 -1.65 1.37 1.07 1.2 1.77 0.18 0.45 -1.64 -0.14 -0.11 -1.2 -1.35 -0.0
-1.93 -2.18 -2.72 -2.38 -2.38 -2.41 -0.12 -4.09 -4.22 -2.98 -0.04 1.42 1.19 1.41 -1.15 -0.73 1.68 -1.21 -1.1 -1.24 -1.23 1.38 1.21 0.57 1.96 0.82 1.09 -1.64 -1.39 -2.18 -1.64 -1.39 -1.94
-1.89 -1.84 -1.7 -1.01 -1.55 -2.34 0.21 -2.86 -2.47 -2.68 0.05 1.02 0.38 1.2 -1.07 -0.32 1.78 -0.76 -0.68 -1.03 -0.88 0.8 1.09 -0.16 1.11 1.09 1.16 -0.82 -0.43 -0.25 -0.74 -0.49 0.17
-0.02 0.28 -1.35 -1.57 -2.26 -1.76 0.83 -2.77 -2.7 -3.18 -0.64 0.32 0.96 -0.25 -2.41 -0.98 1.51 -1.2 -1.66 -1.24 -1.72 0.43 0.6 0.81 1.36 0.53 0.57 -0.31 0.28 0.84 -0.4 0.03 0.99
-3.07 -2.1 -2.41 -1.07 -1.06 -0.7 -1.17 -1.71 -2.87 -2.67 1.74 -0.61 1.56 -1.95 -1.91 0.43 1.79 1.48 1.63 0.97 1.53 -1.59 -1.31 -0.87 1.96 -1.31 -0.88 -3.06 -3.57 -2.82 -2.92 -3.11 -3.14
-1.74 -1.11 -2.76 -2.84 -3.71 -4.18 -0.34 -5.76 -4.04 -4.17 0.54 0.88 0.94 0.59 -2.6 -0.41 2.13 -0.09 -0.06 -0.95 -0.05 1.59 0.67 -0.46 1.99 0.2 0.12 -2.05 -0.51 0.41 -2.07 -2.58 0.35
-1.54 0.31 -2.0 -1.3 -1.87 -3.83 1.39 -2.99 -3.01 -3.76 -1.12 0.88 -0.84 -0.09 -1.13 -0.29 1.77 -1.25 -1.65 -0.89 -1.25 0.49 0.41 -0.99 0.91 0.36 0.42 -0.14 0.68 0.96 0.39 0.7 1.12
-3.11 -3.37 -2.94 -3.55 -4.25 -3.39 -2.05 -7.41 -7.97 -6.99 0.77 1.35 2.97 1.26 -0.19 -0.18 1.29 -1.1 -0.25 -0.73 0.07 1.65 0.14 -5.59 2.63 - -4.99 - -7.58 - - - -
-2.04 -1.92 -2.46 -2.53 -2.42 -2.18 0.03 -4.41 -4.46 -5.01 0.6 0.96 0.86 0.06 -0.17 0.13 1.12 0.23 -0.09 0.11 -0.42 0.27 -0.12 0.06 1.55 0.55 0.93 -0.64 0.47 0.75 -0.73 -0.8 0.87
-1.89 -1.53 -3.37 -3.48 -4.01 -4.03 0.62 -3.94 -4.34 -4.31 -0.2 1.21 1.37 0.23 0.68 0.02 1.06 -1.1 -0.8 -0.36 -0.74 1.48 1.16 1.56 1.63 -0.05 0.29 -1.23 -0.61 -0.6 -1.38 -1.31 -0.91
-1.24 -1.15 -2.26 -3.5 -2.51 - 0.64 -3.37 -3.17 -4.61 -1.99 0.69 1.04 0.6 0.35 1.03 1.32 -0.36 -0.4 -1.81 -0.33 1.52 1.33 0.89 0.23 -0.1 0.41 -0.82 0.31 0.39 -0.21 -0.87 -0.39
-2.79 -4.52 -3.18 - - - -6.78 -4.08 -4.1 -6.19 0.79 -3.44 1.36 - -0.26 0.27 1.51 0.62 0.07 0.93 -0.65 -4.73 -2.42 -2.31 2.08 -1.78 -2.53 0.73 2.01 0.33 0.61 -0.15 1.86
-2.27 -1.94 -3.64 -4.37 -4.53 -6.59 0.05 -6.02 -4.9 -2.79 -0.95 0.25 1.38 -0.28 -0.03 -0.27 2.09 -0.24 -1.81 -2.06 -1.68 0.95 0.81 1.04 1.36 0.91 1.16 -0.43 0.34 0.3 -0.33 -0.71 0.25
-1.43 -0.14 -3.43 -4.75 -4.97 -3.17 0.61 -5.58 -6.62 -4.45 - 0.55 1.39 -2.86 - - 1.71 - - - - 0.59 0.97 2.49 1.07 -0.02 0.68 -0.82 0.96 0.99 -0.64 -0.25 1.37
-1.02 -0.05 -2.33 -1.56 -1.27 -0.48 1.28 -2.08 -0.27 -1.93 -2.57 0.87 1.2 0.05 -3.79 -2.83 1.72 -4.75 -3.1 -3.99 -3.35 0.68 0.68 -0.56 1.9 0.35 0.32 -1.18 0.11 1.06 -0.73 -0.96 1.06
-4.52 -6.61 - - - - - - - - 0.92 - 3.07 - 0.2 0.62 2.16 1.25 0.62 -0.69 0.27 -2.54 1.01 0.24 2.48 -2.73 -0.85 -5.74 -5.83 - - - -3.75
- -10.49 - - - - -8.73 - - - 1.9 -2.34 2.78 -6.95 -4.11 -0.94 2.28 0.13 1.47 0.25 1.06 -4.52 -1.34 -1.77 2.58 -0.45 0.17 -3.61 -2.98 -2.07 -3.46 -2.42 -1.6
-1.01 -0.97 -1.94 -2.22 -2.57 -2.16 -0.1 -1.85 -2.17 -1.85 -0.73 0.03 0.91 -0.44 1.84 0.22 0.68 -0.37 -0.49 -1.18 -0.53 0.65 1.19 0.21 1.46 -0.63 0.04 -0.61 0.44 0.7 -0.11 -0.44 0.55
- - - - - - - -5.24 - - 1.53 -5.53 3.29 - -0.92 0.6 1.9 0.76 0.62 1.1 1.06 - - - 2.45 -1.22 0.14 - - - - - -
-2.27 -1.95 -2.46 -2.77 -1.87 -1.73 0.17 -1.88 -2.09 -1.47 0.1 1.28 0.97 1.02 0.02 -0.11 1.23 -0.02 0.41 -0.09 0.16 1.78 1.09 -0.04 1.8 -0.65 -0.52 -3.91 -1.49 -0.29 -2.57 -2.57 -0.86
- - -5.81 -7.28 - - 0.08 - - - -0.85 1.0 1.75 -0.43 -1.38 -0.2 1.17 -0.75 -1.42 -1.25 -0.83 0.78 1.94 1.08 2.17 -1.09 -0.64 -0.85 0.44 1.09 -1.15 -0.96 0.62
-1.23 -0.96 -1.9 -1.74 -2.6 -2.71 0.61 -2.51 -1.82 -1.1 -0.51 -0.33 1.66 -1.17 -1.69 -0.84 1.71 -1.74 -0.11 -0.21 -0.46 0.03 -0.62 -0.48 1.87 0.62 0.51 0.1 0.56 0.54 0.1 -0.17 0.76
- - - -7.72 -9.47 -5.92 -6.18 - - - -6.01 -1.22 2.36 -1.53 - -6.83 1.89 -7.67 - - -8.81 1.29 1.44 -0.34 2.97 -0.09 0.12 -0.17 0.17 -0.02 -0.33 0.61 1.11
-2.03 -3.73 -1.69 -2.62 -2.26 -4.17 -1.17 -1.06 -2.55 -2.57 -1.15 1.92 1.28 1.58 -3.0 -2.51 1.89 -3.39 -3.5 -3.47 -3.01 2.17 1.42 -0.72 1.99 1.52 1.01 - - - - - -7.37
-0.55 -1.19 -0.56 -0.46 -0.47 0.61 -0.27 -0.76 -0.53 -2.2 -0.99 -0.25 1.66 0.14 -2.74 -1.47 1.42 -2.02 -2.74 -2.3 -2.74 0.57 0.16 1.19 1.9 0.61 0.44 -0.9 -1.13 -0.37 -0.92 -0.37 0.82
-0.22 0.24 -0.58 -0.56 -0.83 -0.32 0.92 -1.55 -0.98 -2.49 -0.68 1.0 1.06 -0.14 -1.97 -1.07 1.06 -1.07 -1.2 -1.5 -1.45 1.16 0.6 -0.44 1.77 -0.38 -0.12 -1.37 -0.08 0.57 -1.12 -0.52 0.75
- - - - - - - - - - 0.48 -2.76 2.05 - 0.25 0.65 1.27 1.05 1.49 0.05 0.4 -4.17 -2.51 -2.35 1.71 -4.01 -2.96 0.52 1.78 0.09 0.21 -0.65 1.72
-0.66 -0.43 -1.26 -1.62 -1.23 -0.78 1.44 -0.16 0.15 -1.18 -1.23 0.39 1.38 -0.82 -2.44 -1.09 1.5 -3.37 -3.7 -2.08 -2.29 0.18 0.73 1.73 1.88 0.59 0.94 -3.35 -0.82 -0.11 -1.81 -2.88 -0.99
-4.38 -4.36 -6.07 -7.77 -6.42 -7.22 0.02 -5.93 -8.47 -7.68 -0.14 1.35 1.09 0.46 -2.46 -0.51 1.77 -0.17 0.44 -0.93 0.1 1.99 1.43 -0.5 2.15 0.14 0.02 -2.4 -0.87 0.08 -2.81 -3.4 -0.36
-6.44 - - - -9.01 - - - - -4.66 1.2 - 3.3 -2.64 -1.78 1.06 2.21 0.77 1.06 0.62 1.29 - -5.49 - 2.0 -0.82 0.36 - - - - - -
-0.76 -0.53 -2.45 -2.27 -1.87 -2.56 0.75 -3.25 -2.04 -2.49 -0.06 0.13 1.98 -0.43 0.12 -0.4 1.37 -0.7 -0.72 -1.24 -0.79 0.47 1.44 0.84 1.55 0.31 0.31 -1.02 -0.57 -0.18 -0.58 -1.02 -0.32
-5.04 -3.62 -4.0 -4.36 -6.18 -5.5 1.32 - - -5.8 -3.23 0.94 1.41 -0.85 -4.25 -1.95 1.92 -6.29 -2.52 -2.37 -3.11 0.85 0.71 -0.1 1.64 0.53 0.63 -0.76 0.71 1.56 -0.16 -0.26 1.6
-2.25 -1.48 -2.73 -2.13 -2.62 -2.63 1.5 -1.78 -1.98 -1.5 -2.35 1.2 0.75 -0.24 -2.1 -1.69 1.58 -2.0 -2.62 -1.97 -2.39 0.93 0.33 -2.86 1.7 -0.99 -0.37 -0.01 1.34 1.22 0.3 0.07 1.39
-6.92 -6.68 -7.82 -6.26 -7.7 -8.67 -2.52 -8.85 -11.16 -10.77 0.34 0.58 0.36 -0.57 -0.68 0.01 1.94 -0.37 0.02 0.04 -0.03 -0.07 -0.31 -2.66 1.4 0.24 0.66 -0.69 0.8 1.7 -0.53 -0.13 2.1
-1.51 -1.47 -2.1 -2.07 -2.78 -2.87 -0.22 -2.3 -3.05 -2.47 0.28 0.64 0.76 0.19 -0.32 0.34 1.04 0.43 0.13 0.43 -0.02 0.88 0.85 1.05 0.81 0.18 0.27 -0.16 -0.03 0.21 -0.24 -0.35 0.28
- - - - - - - - - - 2.4 -7.73 2.91 - -3.7 1.19 2.65 0.76 0.75 -0.37 0.14 -6.13 - - 2.24 -1.0 0.11 - - - - - -
- - - - - - - -7.25 - - 2.52 -4.82 3.05 -6.4 -2.97 1.1 2.52 0.37 0.57 -0.57 0.54 - - -6.65 2.21 -1.22 -0.03 - - - - - -
0.51 0.59 -0.58 -0.92 -0.43 -0.57 0.65 -0.89 -0.48 -0.83 -0.95 -0.04 1.1 -0.99 -0.04 -1.35 1.26 -1.92 -0.73 -0.99 -1.15 0.16 1.45 0.12 1.29 0.02 0.12 -0.62 -0.33 0.18 -0.46 -0.8 -0.03
-1.68 -1.59 -3.39 -3.91 -4.01 -4.66 0.53 -4.2 -4.0 -3.83 -0.13 1.07 1.2 0.21 0.48 0.09 1.5 -1.03 -0.84 -0.73 -0.79 1.36 0.81 1.51 1.48 0.31 0.53 -1.14 -0.18 -0.24 -1.17 -1.02 -0.49
-1.94 -1.01 -3.85 -3.71 -3.23 -2.58 0.45 -5.14 -5.36 -6.06 0.05 0.51 2.59 0.51 -3.34 -1.86 1.88 -1.45 -1.86 -2.03 -2.49 1.36 1.95 1.29 1.65 -0.28 0.27 -2.77 -2.51 -2.18 -2.82 -2.6 -1.12
-1.0 -0.39 -1.48 -1.98 -1.29 -1.95 -1.98 -4.37 -4.1 -4.06 -0.47 -0.02 2.28 0.0 -1.71 -0.94 1.89 -2.89 -2.66 -2.92 -3.19 0.92 0.73 -1.55 2.12 -0.74 -0.43 -0.0 0.04 0.55 0.19 0.81 0.53
- - - - - - - - - - 1.89 - 3.04 - -0.56 1.35 2.33 -0.49 -0.59 2.15 0.7 - - - 2.28 - -2.33 - -1.58 - - - -
-1.97 -1.46 -2.07 -1.7 -2.1 -1.85 0.85 -3.61 -2.11 -2.87 0.88 1.57 0.9 0.24 -1.11 0.56 1.6 -2.62 -1.14 -0.32 -0.15 0.73 1.57 -0.13 1.83 -1.06 -1.08 -2.29 -0.62 -0.03 -0.94 -1.35 0.22
- - - - -7.5 - -6.14 - - - 1.44 -3.42 2.41 - -1.47 0.35 2.49 0.25 1.66 0.52 0.76 -6.05 -0.86 0.56 2.67 -3.38 -0.86 -2.52 -2.49 -2.75 -2.3 -2.63 -2.01
-0.99 -1.25 -0.96 -1.2 -0.75 -1.22 0.52 -0.95 -1.34 -1.91 -0.42 0.37 1.4 0.19 -1.19 -0.79 1.25 -0.5 -0.83 -1.6 -0.97 1.01 0.73 0.41 1.61 0.26 0.44 -0.43 0.06 0.24 -0.37 -0.51 0.15
-1.4 -1.83 -1.2 -0.91 -1.06 -1.33 -0.62 -1.44 -1.12 -1.3 -0.8 1.83 1.44 -0.89 -1.26 -1.64 1.25 -1.73 -1.77 -2.57 -1.96 1.93 0.63 0.24 1.87 0.29 0.41 -1.02 -0.31 -0.04 -0.76 -0.58 -0.3
-0.8 0.22 -0.58 -1.41 -1.56 -3.76 0.95 -2.7 -4.19 -3.89 -1.28 0.31 0.89 0.49 - -4.58 1.28 -2.59 -5.75 -4.08 -3.56 0.81 1.1 0.71 0.84 0.09 0.09 0.46 0.95 1.11 0.51 0.47 1.11
- - - - - -8.13 -6.19 - - - -4.87 -0.84 1.79 1.0 -8.97 -7.06 2.9 -7.9 -4.91 -8.07 -6.04 2.04 -0.16 0.41 2.03 1.86 1.66 -2.43 -3.96 -4.26 -5.88 -3.78 0.86
-6.39 -5.11 - -4.51 -6.42 - -0.36 - - -5.9 -0.46 1.35 1.74 -0.18 -0.48 -0.99 1.39 -2.14 -1.75 -2.17 -1.74 0.57 1.54 0.99 2.2 -0.38 0.04 -1.58 0.6 1.17 -0.75 -0.82 0.76

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.