Heatmap: Cluster_171 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule
Ovule, mature
Ovule, pollinated
Strobilus, female
Ovulate strobilus
Microstrobilus
Kernel
Leaf
Leaf, female
Leaf, male
Leaf, salicylic acid
Leaf, seedling
Leaf, truncation control
Leaf, truncation treatment
Leaf, water
Yellow-green stripe leaves
Green leaves
Stem
Cambium
Root
- - - - - - - -1.13 - - - - - - 1.29 3.07 2.69 1.2 - -
- - - - - - -0.47 1.17 -1.1 -1.66 1.83 -2.35 0.15 -1.28 0.73 1.96 - 2.1 0.16 -20.0
- - - - - - - 4.32 - - - - - - - - - - - -
- - - - - - - - - - - - - - - 4.32 - - - -
0.04 -2.51 -4.07 - -0.87 1.63 - 0.0 -0.24 0.26 -0.35 -1.09 -1.26 -1.36 -0.97 -0.2 0.87 0.83 1.73 0.75
-0.58 0.45 -0.21 -1.76 -0.86 -0.35 - -0.5 -1.95 -0.09 0.38 -1.64 -1.63 -0.34 0.28 -0.75 -1.3 1.37 1.16 1.92
- - - - - - - - - - - - - - - - - - - -
1.22 - - - - - - 0.74 0.78 -0.65 - - 2.18 2.28 1.64 - - - 0.18 -
-7.21 - - - - -1.55 1.62 -8.1 -7.82 - - - - - - - - -4.8 3.72 1.75
-7.21 - - - - -1.55 1.62 -8.1 -7.82 - - - - - - - - -4.8 3.72 1.75
1.55 - - - -0.19 - -0.9 -0.25 1.33 0.49 1.64 -2.25 -0.09 -1.67 -0.47 0.01 - 2.0 -0.79 -
-0.24 1.89 -0.13 3.12 - - - -0.73 - - - - - -1.67 - - - - 2.3 -
- - - - - - - -3.65 - - - - - - - 3.41 - - 3.21 -
- - - - - 2.49 - 0.08 - - - - 0.98 - - - 2.65 - 0.53 1.86
-0.39 1.15 -0.87 0.69 - - - 0.23 -1.02 0.17 -1.11 -2.99 -1.38 -2.41 0.81 2.39 - - -0.18 1.6
- - - - - - - -0.22 2.35 - - - - - - - - - 3.81 -
- - - - - - 1.14 -0.32 - - - - - - - 3.56 1.86 - 0.67 -
- - - - - - - 0.36 - - - - - - - - - - 4.23 -
- - - - - - - 4.32 - - - - - - - - - - - -
- - - - - - - -0.58 - - - - - - - 4.27 - - - -
- - - - - - - -1.17 - -0.24 - 2.82 - - - - - - 3.54 -
- - - - - - - - - - - - - - - - - - 4.32 -
- - - 3.51 0.57 -1.13 - 0.09 -0.55 -0.54 - -1.21 - - - -1.04 - - 1.73 -
- - - - - - - -3.6 - - - - - - - 3.49 1.91 - 1.07 1.5
- - - - 1.79 - - -1.72 1.64 - 3.23 - - - - - - - 1.9 -
- - - 4.18 - - - -2.0 - - - - - - - - - - 0.73 -
-1.7 - - 2.56 - - -0.46 -0.33 -0.12 -0.58 - - - - -0.96 2.22 1.23 -0.78 -1.34 1.13
0.57 - - - 0.54 0.74 - -0.08 -1.04 - 0.44 - - -0.97 - 3.14 1.03 - - 0.28
- - -0.48 1.23 1.94 - -1.18 -0.27 -2.02 0.3 0.46 -2.33 1.04 -0.37 0.33 1.4 0.02 - 0.08 -
0.07 - - - 0.21 - - 0.66 1.18 -0.8 1.02 - 1.68 1.66 0.52 0.92 0.37 - -1.43 -
- 2.4 - - 0.49 - - -0.54 0.94 0.41 - - - - 0.13 - - 1.19 2.59 -
- - - - - - - -1.96 - - - - - - - 4.3 - - - -
- - - - - - - -1.23 0.88 - 1.82 -0.16 - - - 1.87 - - 3.27 -
- - - - - - - -0.2 0.62 -1.32 1.02 - 1.02 -0.93 2.79 2.51 - - - -
- - - 2.25 - - - -0.51 0.54 - - - -0.84 -0.85 - 3.15 1.04 - 0.02 -
2.23 - - - - - - -1.09 - - - - - - - 3.82 - - -0.4 -
1.27 - - - - - - 0.84 - - - - - - - 3.98 - - - -
- - - - - - - 1.59 - - - - 4.09 - - - - - - -
- - - - - - - - - - - - 3.05 - - - - - 3.55 -
0.28 0.36 -0.81 - -0.65 0.4 - -0.15 -0.49 - -0.83 - 1.4 1.45 0.47 2.36 - -0.97 -1.27 -
- - - - - - - 0.37 - - - - - - - 4.23 - - - -
0.58 0.53 - 1.66 -0.63 -1.3 - -0.15 -0.61 -1.44 -0.13 -1.59 1.31 0.86 0.8 1.39 -1.14 - -0.81 -
- 1.99 - - - 1.07 -0.85 -1.92 -0.78 - - - -0.51 - - 3.29 - - 1.02 -
- 3.8 - - - - - - - - 2.61 - - - - - - - - -
0.84 - - 1.21 -0.34 -0.3 -1.11 -0.36 -1.97 - - - 0.38 -0.39 1.42 2.71 - -0.54 -0.3 -
0.57 - - 0.62 -0.06 - -1.9 0.13 0.39 -0.75 0.65 -2.52 0.61 -0.75 -0.31 1.77 0.43 -0.25 1.2 -2.38
- - -1.12 1.59 - - - -1.5 -0.13 -0.32 0.84 - 1.37 0.88 -1.34 2.04 -1.0 -1.3 0.7 0.25
-0.21 - -0.16 1.47 -1.14 - -1.84 -1.49 -2.93 -1.97 -1.33 - -0.2 -0.65 - 2.79 1.79 - -0.15 -0.32
- - 0.19 - 1.74 - - -0.9 -0.14 0.21 - -1.93 - - 1.4 2.32 - 1.99 0.06 -
1.45 - - - - -20.89 - 1.0 0.56 -0.1 -4.13 - -9.48 -0.04 -1.1 -0.29 -0.19 3.27 - -
- - 1.49 - - - - -1.31 - 0.68 1.45 - - - 1.27 3.19 - - -0.12 -
- - - - - - - 4.32 - - - - - - - - - - - -
- - - - - - 3.14 0.16 - - - - - - - - - - 3.33 -
- - - - 2.76 - - 1.13 - - 2.66 - - - - - - - 2.23 -
0.33 - -0.57 1.4 -2.8 -0.66 -0.62 0.16 0.03 -0.0 -0.37 -2.46 1.63 0.9 -0.76 1.59 -0.67 -2.07 -1.41 -3.19
0.3 -1.29 -0.49 2.19 -0.21 -0.51 -1.44 0.13 -0.38 -0.86 -0.2 -0.68 -0.53 -0.82 -0.47 -0.47 -0.16 -0.41 1.02 -0.21
- - - - - - - 0.4 - - - - - - - 4.22 - - - -
0.81 - - 3.23 1.4 - -0.13 -1.88 - -1.09 - - -1.67 - 1.56 - -0.16 - -1.25 -
- - - 1.48 - - -0.85 -0.4 - - -0.27 -1.17 0.41 -1.62 - 2.72 2.68 - - -
-0.07 1.99 - - - - - 2.05 0.27 3.01 - - - - 0.72 - - - - -
0.66 - - 3.25 - - - -0.85 - - - - - - - 3.06 - - - -
- - - - 3.26 - 2.18 1.64 - - - - - - - - - - 1.46 -
- - - - - - - -0.73 - - - - 1.03 - - 4.12 - - - -
- - - - -3.02 - 2.34 -8.0 -4.71 - - -4.85 - - - - - - 3.86 -2.11
1.14 1.29 - - - - - 0.68 1.34 1.61 1.05 -1.83 - - 0.04 1.41 - -0.04 0.22 -
- - - - - - - 0.39 - - - - - - - - - - 4.22 -
-2.89 - - - - - -2.7 0.16 1.23 0.95 1.84 -1.52 1.36 0.64 1.3 1.02 0.82 - - -
- - - - - - - -0.16 - - - - - - - 4.26 - - - -
-1.8 - -0.83 - -0.74 - - -1.34 1.44 1.96 0.73 -2.61 - - 1.31 2.33 0.87 - -1.31 -
- - - - - 1.0 - -0.89 -0.79 - - - - - - 3.5 2.3 - -0.69 -
1.79 - - - - - - 0.17 -0.47 0.31 -2.22 -2.12 0.97 -1.1 0.63 -1.91 0.57 -0.24 -0.99 2.57
1.86 1.67 - - - - 1.4 -1.61 -1.19 - - - - - - - 3.0 0.32 -0.99 -
- - - - - - - -1.95 - - 1.48 - - - - 4.08 - - - -
- - - - - - - 2.66 - - 3.78 - - - - - - - - -
- - - - - - - 4.32 - - - - - - - - - - - -
-1.17 -1.14 -1.26 - -4.34 -1.29 2.24 0.52 -0.78 -1.34 -0.97 2.7 0.18 0.58 -1.61 -5.72 -1.08 -3.32 -7.42 -0.87
-0.86 0.7 -1.32 0.24 - - -1.16 -1.71 0.25 0.32 0.44 -2.34 -1.05 - -0.07 2.7 0.76 -0.51 0.26 -
- - - - - - - -1.11 1.81 - 1.22 - - - - 3.49 1.29 - - -
- - - - - - - -0.78 - - - - - 1.8 - 0.3 - 3.01 2.73 -
0.19 - - - - - -0.74 0.75 -0.61 1.62 0.07 - 0.78 - - - 1.61 - 2.39 0.82
- 1.89 - 2.43 - - - -0.32 - - - - -1.61 -0.06 - 2.94 - - 0.21 -
- - - - - - - 4.32 - - - - - - - - - - - -
- - - - - - - - - - - - - - - 4.32 - - - -
-0.42 - - - 0.64 - -0.15 -0.93 - - 2.04 -0.42 - - 1.92 2.83 - - -1.04 -
- - - - - - - -0.67 -0.81 -6.9 - - -1.72 - -26.62 - - 2.89 3.47 -
- - - - - - - 2.77 - 1.85 - 1.63 - 2.69 - - - - - -
-0.81 1.32 0.3 1.86 - - - -1.11 - -0.59 0.13 - - - 0.07 2.94 - - 0.18 -
-0.63 - - - - - -0.43 1.09 0.09 -0.55 - - 2.5 2.14 - - 1.58 - 0.72 -
-0.81 - -1.18 - -1.2 2.43 0.64 -1.11 -2.87 -3.25 -0.88 -1.97 -2.02 -2.46 -0.1 -0.22 -1.69 0.26 1.57 1.77
-0.6 -2.43 -2.79 1.95 0.98 2.06 -0.82 -1.28 -3.43 -3.39 -2.32 -2.04 -4.1 -3.62 -1.35 -0.83 -0.32 -0.3 1.18 1.28
2.03 - - - - - - -2.17 - - - -0.01 - - - 2.66 - - 0.55 2.79
- - - - - - - -0.55 - - - - - - - 4.27 - - - -
-5.61 - - - 0.17 - - -0.95 -1.28 -4.06 - - - - - - - -1.01 4.12 -
- 1.13 - 0.67 - 0.17 -0.64 -0.88 0.3 1.15 - - - 0.8 0.33 2.57 - - -1.57 0.26
- - - - - - 0.93 0.83 0.09 - 1.53 - - - 3.1 1.92 - - - -
0.06 - - 3.27 0.7 - -4.28 -0.8 -1.73 -1.95 - - 1.3 -0.52 -1.21 - - - 1.53 -
- - - - - - - - - - - - - - - - - - 4.32 -
0.71 - - 1.36 -0.29 - -1.19 -1.02 0.26 0.18 0.14 - -2.73 -0.17 1.05 2.64 -1.23 - -0.26 -
0.2 - -3.34 -1.47 -1.47 - -23.95 -0.08 1.28 1.61 1.19 - - - 2.69 -0.85 0.73 - -0.59 -
- 2.55 - - - - 0.62 -1.31 -0.47 0.53 1.28 - - -0.01 - - - - 2.73 -
- 2.24 - - - - - 1.43 -0.81 1.85 - - 1.37 -0.42 1.0 - - - 1.62 -
0.25 - -0.78 - 0.27 - - 0.42 0.48 0.4 0.74 -2.59 0.72 -2.17 0.59 2.78 - -0.96 -1.33 -
- - - - 2.37 - - 1.07 - 1.68 - - - - - - - - 3.26 -
1.12 2.26 - - - - - -1.97 - - - - - - 1.9 2.6 1.21 - -0.55 -
- - -0.47 2.68 0.43 0.59 -1.22 -0.13 -1.21 0.15 -0.66 -1.43 -1.95 -1.05 0.23 1.08 - - -1.1 0.71
- - - - -0.84 - - 0.31 -0.22 -0.15 - - 2.34 2.11 0.42 2.01 0.56 - -2.42 -
- - - - - - - 4.32 - - - - - - - - - - - -
- - - 3.24 - - - -2.43 -0.77 1.68 - - - - - - - 0.66 2.31 -
- - - - - - - 0.48 - - - - - - - 4.22 - - - -
- - - - - - 0.64 2.42 0.95 1.68 - - 1.85 1.0 - - - - - 1.23
- - - - - - - - - - - - 4.32 - - - - - - -
1.07 - - - - - - 0.15 - - - - - - - - - - 3.2 2.93
1.26 0.38 -0.79 0.92 - - - -0.12 0.91 0.01 0.76 -0.73 -1.95 - 1.39 - - - -1.33 2.15
- - 4.25 - - - - -0.11 - - - - - - - - - - - -
- - - - - - - - - - - 4.32 - - - - - - - -
- - - - - - - -1.2 - - - - - - - 4.29 - - - -
-1.14 0.91 -2.23 - -0.12 -0.95 0.39 0.74 0.56 -0.45 -0.69 -0.26 -0.92 0.52 0.52 -1.94 0.31 -0.1 0.61 1.02
- - - - - - - - - - - - - - - - - - 4.32 -
- - - - - - - 0.41 2.44 - - - 2.85 - - - - - 2.59 -
- - - - - - - - - - - - - - - - - - 4.32 -
- - - - - - - -2.59 - - 0.93 - -0.41 -0.53 - - - - 4.04 -
-1.46 -1.1 -2.51 -1.88 -1.02 -1.75 0.45 0.12 -0.49 -0.54 0.61 -2.91 1.64 1.79 1.09 -0.02 -0.19 -0.68 -0.64 -0.76
-1.5 - - - - - -0.38 -2.5 - -1.38 - -2.31 - - - - - 2.1 3.73 -0.82
-2.02 -1.47 -1.0 0.65 - -2.44 - 0.13 0.73 0.79 1.03 -0.7 1.66 0.58 1.46 -0.35 0.33 - -0.82 -
- - - 2.95 - - - 0.45 0.61 - - - -0.14 - - 2.94 - - -0.37 -
- - - - - - - 4.32 - - - - - - - - - - - -
- - -1.35 1.2 - 0.25 -2.2 0.17 0.39 -2.24 -0.52 - 0.82 -0.53 0.35 2.69 0.47 - -0.04 -
- - - - - - - - - - - - - - - - - - 4.32 -
0.96 - - 2.64 - - - -0.67 -0.1 - - -1.04 0.13 1.08 0.85 1.44 - - 1.03 -
1.33 0.53 - - -0.5 - -2.33 -0.28 -0.73 -1.37 -1.65 -1.46 -1.9 -3.02 0.51 1.16 -0.52 2.31 1.09 -0.31
- 0.47 -0.87 - 1.59 -1.49 -2.38 -0.31 0.36 0.28 1.58 -1.22 -0.39 -1.58 1.0 - - 0.15 1.47 -0.3
- - - - - - 0.09 0.19 - - - - -0.45 -0.51 - 2.67 3.23 - -0.69 -
- - - - - - - -1.13 - 1.59 - - - - - 4.05 - - - -
-1.03 - - - - 0.14 0.32 0.47 1.23 -0.87 0.84 -1.87 -1.4 -0.45 -0.25 2.22 - 1.4 -0.62 -0.15
- - - - - - - - - - 4.32 - - - - - - - - -
- - - - - - -0.51 -0.42 - - - - 2.5 -0.31 0.0 2.89 1.31 - 0.27 -
-0.3 0.5 -1.67 1.5 0.74 -1.33 0.43 -0.63 -1.84 -0.87 0.28 -3.64 -0.01 -0.53 -0.87 0.03 -1.55 -1.71 2.09 -1.76
- - - - - - - - - - - - - - - 4.32 - - - -
- - - - - - - 0.56 - - - - - - - - - - 4.21 -
- - - - - -2.95 0.74 0.69 - - 1.7 - - - - 3.59 0.37 - - -
-0.12 - - - 0.93 - 0.16 0.85 0.71 -0.04 2.29 - -0.61 - - - 1.27 - 1.88 -
-1.02 -1.19 0.88 0.35 -0.77 -2.16 -1.09 -0.37 0.51 -3.1 0.58 -0.92 -1.1 -0.12 -0.16 1.56 1.55 -2.54 1.02 -
1.8 - - - - - - -0.41 - - - - - - - 3.46 - - 2.24 -
- - - - 1.09 1.48 -0.71 0.6 - - - -1.84 -0.02 0.88 - 2.66 0.35 0.92 -1.47 -
- - - - - - -1.21 0.17 0.07 -0.33 - - 2.68 2.63 -0.74 1.77 - - - -
- - - - - - - -3.14 - -1.68 - -2.88 - - - - - 1.47 2.53 3.45
- - - - -0.16 - 0.91 -2.16 - - - -5.39 - - - - - 2.61 1.58 2.98
-0.36 - - 1.35 - - -1.2 -0.92 -1.93 -1.16 1.2 - - - 1.01 2.93 1.15 - -0.25 -
- - - 4.17 - - - -2.01 - - - - -0.03 - - - - - -0.27 -
-3.74 - - -0.89 -2.71 - -1.1 0.58 -0.28 -0.39 -1.26 -0.16 -2.05 -0.64 -0.32 - -2.27 0.37 2.57 2.39
1.13 -6.38 - - - -6.09 1.48 0.17 -6.97 - - - - - - 3.79 -7.72 - - -6.74
- - - - - - - 0.53 0.55 - - - - - - 3.94 - - 0.77 -
-1.47 -2.06 -4.23 0.48 -1.14 -2.44 -1.83 -0.46 0.06 1.06 0.62 -2.94 -0.6 -0.12 0.37 2.34 1.25 -1.58 -0.26 -4.52
- - - - - - - - - - - - - - - - - - 4.32 -
- - - 2.25 1.04 - - 0.58 - - 0.71 -11.48 1.54 0.73 2.02 -0.14 - - -0.95 -
- - - - - - - 1.12 1.53 - - - - - - 3.51 - - 1.81 -
- - - 1.76 0.05 - - -1.16 0.61 -0.76 - - -1.34 - - 3.43 0.55 - -1.38 -
- - - 2.18 - 1.81 -0.22 -1.63 - - 0.37 - -0.86 - - 0.76 - 0.31 2.59 -
- - - 4.23 - - - -2.25 -0.04 - - - - - - - - - - -
- - - - - - - - - - - - - - - - - - 4.32 -
0.06 - - - - - -0.63 -0.55 - - - - -0.95 -1.48 - 2.59 2.95 -0.06 1.02 -
1.69 0.79 1.57 0.73 -0.38 -1.25 -1.73 0.5 1.01 -2.76 0.06 -0.23 -2.23 -1.05 0.4 -2.06 -3.07 -1.22 -0.87 -3.39
- - - - - - - - - - - - - - - 4.32 - - - -
- - - - - - - -0.56 0.02 0.91 - - - - - 3.41 - 2.53 - -
- - - - - - - 4.32 - - - - - - - - - - - -
0.11 - - - - - - 0.43 1.11 1.68 -0.6 - -0.27 0.63 - 2.95 -0.39 - - -0.59
- - - - - - - - - - - - - - - 3.95 - 2.2 - -
- - - - - - - -1.01 -0.23 0.77 - - - 0.12 - 3.32 1.74 - - 1.33
- - -2.1 - -1.51 - - -1.45 -2.66 - - - - -2.25 - - - 1.32 4.0 -2.18

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.