Heatmap: Cluster_18 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule
Ovule, mature
Ovule, pollinated
Strobilus, female
Ovulate strobilus
Microstrobilus
Kernel
Leaf
Leaf, female
Leaf, male
Leaf, salicylic acid
Leaf, seedling
Leaf, truncation control
Leaf, truncation treatment
Leaf, water
Yellow-green stripe leaves
Green leaves
Stem
Cambium
Root
- - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - - - - - -
- - - - - - - 0.63 - - - - - - - - - - 4.21 -
- - - - - - - 1.87 - - - - - 3.11 - - - - 2.95 -
0.11 - - - - - - -1.05 0.72 - -0.52 -1.32 - - 2.65 - 1.5 1.85 1.57 -
1.75 - - 2.54 0.56 - - -0.98 - -1.35 - - - -1.93 -0.72 1.73 -0.04 -0.72 1.09 -0.83
- - - 3.71 - - - -2.33 - - - - - - - - - 0.13 2.5 -
- - 3.03 - 3.05 - - 0.19 - - - - - - - - - - 1.27 -
- - - - - - - - - - - - - - - - - - 4.32 -
0.55 -0.02 -0.69 2.58 2.31 0.63 -1.08 -1.66 -3.93 -3.17 -2.17 -5.53 -3.93 -4.14 -2.68 -1.93 -1.95 0.98 -4.23 -1.17
- - - 3.46 - - - -0.81 - - - - - - - - - -0.0 2.89 -
- - - - 2.3 - - -0.83 - - - - 1.13 - 2.07 - - - 1.81 2.21
- - - - 0.42 - -1.17 -0.71 -0.09 -0.83 -2.15 -1.22 1.36 0.71 0.53 2.74 0.24 - 0.46 -0.8
1.69 - 1.29 2.54 -0.14 - -16.57 -1.41 -0.85 -0.45 0.02 -1.15 0.54 -0.63 - -12.31 - 0.33 -2.79 -0.05
- - - - 3.74 - - -1.4 - - - - - - - - - - 2.65 -
0.17 -1.7 -2.87 1.42 -0.78 -0.63 -3.72 0.18 -0.05 -0.86 -2.89 -3.83 0.64 0.36 -1.48 1.36 0.56 -1.46 1.4 0.43
-1.87 -13.38 -8.77 2.12 0.09 -4.82 -0.63 0.7 1.26 -0.02 -4.95 -1.31 1.38 1.04 -1.31 -6.67 -8.46 0.16 0.4 -0.57
- - 3.35 - - - - 0.39 - - 2.23 - 1.94 - - - - - - -
2.08 - - - - - 0.59 -0.12 0.74 1.66 - 1.06 0.27 1.04 - - - - -0.15 1.18
- - 1.27 1.05 0.53 - - -1.35 1.26 -0.59 - - -6.89 -4.54 -3.98 -4.23 -2.98 3.37 - -
- - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - - 4.32 - - -
1.16 2.81 - - 1.17 - - 0.13 1.18 -0.49 - 1.86 -0.85 - - - - - -2.09 -
0.52 -4.17 -3.65 3.83 -2.04 -3.44 -1.9 -2.6 -3.38 -4.53 -3.79 -3.72 -2.92 -2.95 -3.07 -1.71 -1.56 -2.32 0.91 -3.85
1.58 2.74 - - - - 2.43 - - - - - 0.16 - - - - - 1.93 -
- - - - - - - 4.32 - - - - - - - - - - - -
-3.26 0.72 -1.27 1.71 2.18 1.48 -4.54 0.3 -4.04 -1.56 -3.84 0.96 - - - -2.04 -2.32 0.12 0.93 -3.23
- - - 4.32 - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - - - - - -
1.25 0.47 0.46 2.38 1.12 -1.42 -4.06 -0.64 -1.08 -1.61 -1.34 -5.09 -0.02 -0.08 -1.04 -1.55 -0.85 -0.74 -2.69 0.16
- - - - - - - 4.32 - - - - - - - - - - - -
-0.31 - - 3.95 - - -0.1 0.41 -0.03 - - -1.14 - - - - - - - -
- - - - - - - 4.32 - - - - - - - - - - - -
- - - - - - - - - - - - - - - 3.94 - - 2.23 -
- - - - - - - - - - - - - - - - - - - -
-2.95 - -2.21 2.26 - -2.14 - -4.55 - - - - 3.08 2.46 -2.04 -2.26 - - -2.5 -
-1.88 - - - 1.83 - -1.77 -0.17 -1.61 -1.44 0.62 - -0.04 -1.32 1.03 2.54 0.2 - 0.91 -1.0
-0.66 -4.1 -5.12 -1.82 -3.24 3.72 0.26 -1.06 -1.47 -0.13 -1.04 -3.28 -0.58 -1.8 -0.54 - -2.16 -1.62 -5.15 -
1.62 -2.23 -1.78 3.28 -0.69 -2.61 -1.14 -1.84 -1.76 -3.63 -1.42 -4.26 -1.24 -1.84 -1.76 -0.83 -1.24 -1.23 0.31 -0.4
- - - - - - - -1.8 - - - - - - 3.04 3.52 - - - -
- - - - - - - 0.7 4.2 - - - - - - - - - - -
- - -0.01 2.1 -3.12 - 0.38 -0.0 0.31 -4.27 0.89 - 0.9 0.53 - 1.87 0.49 - -0.36 -
-1.97 - - 2.95 2.55 0.12 -0.93 -1.05 - -1.82 - - -2.42 -2.47 - 1.43 - -1.26 -1.57 -
-2.93 - - 4.31 - - -9.85 -4.76 - - - - - -5.0 - -5.33 - -20.74 - -
- - - - - - -1.01 -3.52 - - -0.59 -0.96 3.1 3.0 -2.65 -1.09 - 0.05 - -
- - 3.67 - - - 0.42 -1.01 -6.27 -2.52 -2.0 - -4.04 -2.62 - - - - 2.25 -
- - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - 4.32 - - - -
1.03 - 0.01 1.71 1.17 - 0.28 -0.08 -0.68 - 0.91 0.54 - - -0.07 - 2.12 - - -
1.58 -2.74 -1.51 3.6 -1.27 -3.56 -0.19 -2.83 -3.61 -3.7 -2.37 -2.9 -1.76 -2.18 -3.51 -1.05 -2.38 -3.08 -0.12 -3.77
2.56 - - - - - 1.1 0.44 0.93 - - 0.69 1.26 0.52 0.87 - - - 0.54 -
- - - - - - -0.42 0.61 1.92 1.83 1.69 1.28 - - - 1.49 - - - 0.94
0.3 - - 2.96 0.17 - -3.76 0.43 -5.5 - -1.91 - 2.08 1.71 -1.74 - - - -1.44 -
- - - - - - - - - - - - - - - - - - - -
- - - - - - - 1.12 2.27 - - - - - - - 3.7 - - -
2.77 - - - - - - -1.05 - - - - - 0.66 - - - - 3.02 1.6
1.96 -1.97 -1.49 3.12 -1.21 -1.38 0.06 -2.06 -2.72 -3.23 -1.52 -3.86 -1.18 -1.5 -1.89 -0.22 -1.03 -1.86 0.17 -2.26
- - - - 3.06 - - -2.03 - - - - - - 1.77 - - - 3.0 -
- - - - - - - 0.38 - - - - - - - - - - 4.23 -
- - - - - - - 1.9 - - - - - - - - - - 4.02 -
- - 1.66 3.36 1.75 - - -1.37 - - - 0.71 - 0.2 - - - - - -
-0.65 - -1.73 0.7 1.24 0.33 3.43 -0.1 - - - - - - - - - 0.99 -5.54 -3.22
1.73 -5.86 -5.73 3.21 -0.88 -2.32 -0.66 -2.58 -2.1 -2.46 -2.06 -4.91 -1.38 -1.43 -1.55 -3.19 -1.76 -2.42 1.72 -2.26
- - - - - - - -1.04 - - - - 2.59 - 3.75 - - - - -
- - - 3.48 - - - 0.22 - - - - - - - 2.4 - - 1.27 -
- - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - - - - - -
0.03 - - 2.61 - - 0.89 0.78 - - - - 1.33 1.18 - - - - 2.17 -
-1.57 - - 2.14 1.13 - -0.38 -0.49 -1.18 0.63 - - 0.5 -1.01 - 1.72 0.55 - 1.24 -0.82
1.69 -2.46 -1.53 3.42 -1.41 -2.75 -0.46 -2.23 -2.64 -3.75 -1.61 -3.18 -1.83 -2.03 -2.14 -0.45 -0.55 -2.82 -0.25 -2.0
- - - - - - - - - - - - - - - - - - - -
4.05 - - - - - - 1.77 - - - - - - - - - - - -
-0.44 - -0.51 2.31 - -0.31 -1.24 0.28 -0.57 - - - 1.15 -1.35 - - - -1.69 2.92 -
-0.15 0.57 0.35 0.46 0.9 0.77 -0.42 -0.63 -0.27 -0.93 -0.95 -0.35 -1.08 -0.07 -0.17 0.61 0.87 -0.38 -0.61 -1.92
- - - -8.46 - 1.64 - -0.06 1.1 3.0 - - - - - - - - 2.54 -
- - - - 3.43 2.13 - -0.96 1.54 - - 0.48 - - - - - - - -
- - - - - - 1.36 0.15 2.47 2.49 0.88 - - -0.42 0.9 - - - -0.46 -
1.11 1.07 -0.1 0.61 - - - 0.07 -1.23 -1.91 -0.17 - 1.89 1.42 - 1.19 -0.98 - 0.56 -
-3.73 - -2.55 -0.97 -4.27 -2.03 -1.7 -0.01 -0.05 -0.75 0.91 -0.52 0.99 1.22 0.14 2.5 1.25 - -5.75 -4.52
- - - - - - - 4.32 - - - - - - - - - - - -
- - - - - - 4.25 -0.06 - - - - - - - - - - - -
- - - - - - - - - - 4.32 - - - - - - - - -
3.03 - - - - - - -0.62 1.37 - - - - - - - - - 3.1 -
- - - - - - - - - - - - - - - - - - - -
- - - - - - 1.37 1.39 - 0.01 - 0.38 0.47 0.49 0.95 - 2.37 - 1.38 -
-0.58 - 0.56 - 0.5 - 3.29 -0.54 - -0.44 0.31 - -0.98 -1.09 0.22 - 0.91 - - -
1.26 -2.43 -0.38 2.76 -0.12 - -1.84 -1.89 -4.3 - - -4.11 -1.27 -2.02 -0.61 -0.28 -1.54 -3.64 2.52 -
-4.12 - - 4.12 - -2.6 -2.75 -2.86 - -4.45 -2.77 -5.33 -3.34 -2.18 - -1.92 -2.64 -16.18 0.08 -4.11
- - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - - - - - -
1.79 - - - - - - 0.03 -0.09 0.68 - - - 0.1 -5.05 - 1.99 - 2.98 -
- - - - - - - - - - - - - - - - - - - -
1.27 - - - - - 2.7 -2.95 - - - - - - - 3.46 - - - -
- - - 4.19 - - - -2.39 -4.56 -2.83 -1.91 -4.95 -1.57 -0.44 -5.94 - - - - -
2.11 -1.76 -1.71 2.91 -0.49 -1.4 -0.42 -1.86 -2.63 -2.8 -1.12 -4.07 -0.89 -0.99 -1.45 -0.46 -0.76 -1.23 0.3 -1.91
-2.13 -1.05 -5.77 -0.75 -4.22 -3.65 1.34 -1.32 -0.45 -0.21 1.28 -0.17 -4.36 -4.37 1.31 2.13 1.83 -2.54 -7.35 -6.21
-2.31 0.71 -0.77 0.85 1.62 0.91 -0.98 -0.74 -1.09 -0.95 -1.41 -0.08 -1.79 -1.31 -1.6 0.3 1.15 0.79 -4.18 0.19
2.47 -1.28 -3.77 2.55 -0.29 -1.69 -0.7 -1.8 -2.87 -4.09 -0.72 -3.16 -0.47 -1.04 -0.92 0.08 -0.89 -1.99 0.33 -1.61
-6.11 - -8.16 -1.86 -2.46 -3.37 -1.99 0.62 0.84 0.65 1.67 -0.04 1.19 1.08 1.35 -0.53 -0.84 -4.12 0.75 -2.17
- - - - - - - - 4.32 - - - - - - - - - - -
- 4.2 - - - - - - - - - - - - - - - - 0.64 -
- - - - 4.32 - - - - - - - - - - - - - - -
- - - - - - - -1.04 - - - - 2.59 - 3.75 - - - - -
- - - - - - 3.28 -1.76 - - - - - - - - - 2.23 2.41 -
-8.64 - - 0.22 - -7.97 -1.86 0.38 1.12 1.59 -17.86 0.54 - - 2.54 1.0 -0.36 1.03 - -19.06
- - - - - - - - - - - - - - - - - - - -
0.04 -5.53 -1.2 3.41 1.6 -0.22 -3.97 -1.53 -3.07 -3.09 -2.13 -1.33 -2.75 -3.66 -2.45 -2.29 -0.22 -1.87 -0.82 -1.37
2.19 -2.37 -1.41 3.07 -1.66 -1.93 -0.47 -2.03 -2.57 -3.16 -1.74 -2.29 -1.79 -1.68 -1.92 0.1 -0.15 -2.38 -0.11 -2.25
- - - - - - - - - - - - - - - - - - - -
- - - - 1.9 2.1 2.28 -2.22 - - 1.86 - - - - - - 1.72 - -
-2.47 1.17 - 1.91 3.14 -1.19 - -1.31 -2.68 - - - - - - - - 1.55 -0.69 -1.2
- - - - - - - - - - 3.39 - - - 3.25 - - - - -
-0.41 -0.57 1.82 - -1.74 - 1.45 0.73 -1.46 -0.56 0.51 -2.11 0.84 -0.17 1.44 - - 0.09 - 0.3
- - - 4.32 - - - - - - - - - - - - - - - -
0.98 - - -1.12 -2.67 3.49 0.28 -0.31 -2.12 -0.96 0.41 - -0.94 -2.35 -0.94 - -1.43 -2.01 -3.25 -3.08
- - - - - - - - - - - - - - 2.81 3.7 - - - -
- - - - - - - 0.37 - - - - - - - - - - - 4.23
- - - - - - - 1.75 - - - - - - - - - - 4.06 -
- - - - - - - - - - - - - - - - - - - -
4.32 - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - - - - - -
-2.43 -2.78 -1.64 -1.39 0.27 2.73 -0.73 -0.78 -1.48 -2.09 -0.61 0.3 -0.78 0.64 -0.04 -0.72 -1.85 1.17 -0.38 -1.16
- - - - - - 4.32 - - - - - - - - - - - - -
- - - 4.31 - - - -2.58 - - - - - - - - - - - -
-2.36 -1.92 -1.26 2.95 0.2 -4.9 - 0.26 1.26 1.0 -2.17 -2.47 -3.4 -3.98 -2.22 -2.25 -2.43 -0.59 1.36 -2.26
- - - - - - - - - - - - - - - - - - - -
1.69 - - 3.04 - - -0.41 -1.11 -0.51 - - - -2.02 -0.12 -0.9 1.58 - 0.14 -0.24 -
- - - - - - - - - - - - - - - - - - 4.32 -
- - - - - - - - - - - - - - - - - - - -
- - - 3.47 1.92 - - -1.59 0.07 - - - 0.37 1.3 - - - - - -
0.62 - - 1.27 - - 1.45 -0.23 -2.32 - - - 1.51 1.56 - -0.14 2.25 - -0.28 -
- - - - - - - - - - - - - - - - - - 4.32 -
0.19 -2.2 -0.11 1.23 1.11 -0.72 -0.96 -0.17 0.05 -0.03 -1.89 -0.49 -0.69 -0.22 -1.97 0.91 1.15 -0.11 -1.41 0.1
-0.62 - -1.27 2.77 2.03 - - -1.46 -0.14 -0.48 -0.29 -0.8 -1.63 -2.73 -1.49 1.34 -0.15 -1.31 - -
-0.63 0.48 0.02 0.33 1.61 -1.91 -7.09 -0.31 0.03 -0.33 -1.84 1.28 -2.02 -1.06 -1.64 0.31 1.46 0.98 -8.49 -6.32
2.48 - - - - - - 2.14 - - - - - - - - - - 3.32 -
- - - - - - - - - - - - - - - - - - - -
0.3 - -1.19 1.37 -1.34 0.59 -1.19 -0.11 0.72 1.44 -0.44 -0.94 -0.09 -1.19 -0.54 1.27 - -1.52 0.78 -1.63
- - - - - 3.47 - - - - - - - - 2.91 - - - 0.48 -
- - 1.54 2.18 - - - 0.7 -1.02 - 0.17 - -0.03 0.14 1.98 0.99 - - 0.39 -
0.86 - -0.4 2.96 -0.39 - - 1.02 - - 0.49 - - - - - - 2.39 -2.13 -
- -17.42 - - 0.3 - -5.37 -0.44 - - 1.7 -5.36 2.61 2.81 -0.79 -1.87 - - -4.19 -0.47
- - - - - - - 2.01 - - - 4.0 - - - - - - - -
-2.15 -2.49 -0.92 -1.45 0.04 3.22 -0.54 -1.16 -1.99 -2.48 -0.41 -0.42 -1.48 -0.9 -0.3 -1.04 -1.85 1.27 -1.81 -3.1
- - - - - - - - - - - - - - - - - - - -
1.56 - 1.92 - 2.26 - - -1.94 - - - 1.53 - -0.64 - - - 0.63 1.65 -
- - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - 4.32 - - - - - - -
1.82 -2.27 -2.59 3.4 -2.14 -2.59 -0.8 -2.74 -3.96 -4.63 -1.5 -3.81 -1.91 -2.03 -2.88 0.08 -0.32 -2.17 -0.09 -2.45
0.3 -4.4 -1.83 2.11 0.7 3.02 -0.28 -3.49 -3.32 -2.26 -4.15 -0.49 -2.53 0.34 -6.32 -4.12 -0.33 -3.51 -9.48 -8.23
- - - 2.36 0.66 - - -1.33 - - - - - - - 1.35 2.74 - 1.88 -
3.07 - - - - - - - - - - - - - - - 3.53 - - -
- - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - - - - - -
1.46 0.12 - 2.44 1.14 -9.52 -3.9 -0.12 -2.95 -6.32 - -2.35 -5.2 -0.59 -1.99 -1.06 -0.44 2.26 - -2.06
- - - - - - - - - - - - - - - - - - - -
- 1.3 - - - - -0.56 -0.77 0.42 -0.67 1.07 -0.67 1.61 1.99 -0.05 1.04 - 0.09 -1.08 -
- - - - - - - - 1.97 4.01 - - - - - - - - - -
- - - 2.4 - - - -0.06 - - 0.8 - - - - 1.29 - - 3.26 -
0.1 -1.05 -1.93 -5.96 -0.2 -0.55 -0.52 -0.37 0.37 1.14 - 0.68 0.99 0.24 - 1.46 0.62 -5.19 -0.92 1.03
- - - - - - - 2.62 2.17 - - - - - - - - - 3.23 -
-2.94 -0.43 -3.01 -2.55 1.11 3.4 -0.34 -4.62 -4.45 -4.25 -3.98 -5.37 -4.73 -4.22 -2.5 -2.84 -6.52 -6.95 -7.11 2.23
-0.56 - - - 0.55 - -5.16 -0.96 -1.35 - -2.6 - 1.59 2.83 -0.81 - - -0.17 2.1 -0.23
0.64 - - 1.4 1.28 - - -1.9 2.33 -14.9 - - - - - - - 2.96 -1.74 -
- - - - - - - - - - - - - - - 4.32 - - - -
- - - - - - - - - - - - - - - - - - - -
1.0 - -3.75 3.41 -1.84 -2.51 -1.03 -2.89 -3.18 -3.02 -2.49 -3.79 -1.64 -1.59 -2.79 -0.04 -0.28 -3.55 1.54 -2.52
2.11 -1.6 -1.51 2.87 -0.73 -1.81 -0.16 -1.94 -2.2 -2.76 -1.55 -4.66 -1.1 -1.19 -1.49 0.05 -0.27 -1.97 0.19 -1.33
- 3.69 1.69 - 1.12 0.67 - -2.99 - - - - - - - - - - - -
- - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - - - - - -
1.5 - - - 2.32 - - -0.15 -0.87 - - - -3.84 0.33 - 1.45 - - 2.74 -
- - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - 4.32 - - - -
- - - - - - - - - - - - - -19.26 - - - - 4.32 -
- - - - -18.98 - - -1.26 - - - - 3.39 3.19 - - - - - -
4.03 - - - - - - 1.88 - - - - - - - - - - - -
- - - - - - - -0.2 - - 3.79 - - 2.41 - - - - - -
2.47 - - - -12.73 - -17.94 -1.59 -15.13 - -16.84 -18.19 - - - 3.07 - - 2.52 -
- - - 1.07 0.63 - - -4.99 - -0.26 - - - 0.29 - 3.07 2.55 - - -
-0.83 - - 3.64 - - -0.72 -1.14 -1.44 - - - - - - - - -0.03 2.18 -
-0.22 - 3.13 - 1.43 2.31 - 0.0 - - - - - - - - - -1.53 - 0.49
- - - - - - - - - - - - - - - - - - - -
- - - 4.15 - - - -0.61 - - - - 0.66 - - - - - - -
- - - - - - - - - - - - - - - - - - - -
- - - 3.83 - - - -0.89 0.99 - - -0.64 - - - - - - 1.4 -
- - - - - - - 4.32 - - - - - - - - - - - -
0.72 -1.26 -1.5 3.53 -1.56 -1.02 0.04 -2.29 -2.09 -3.42 -1.44 -4.96 -2.47 -2.42 -3.83 -1.15 -2.45 -1.87 0.68 -1.96
0.22 -1.0 - 1.87 -2.07 - -0.03 -0.4 -0.44 -1.4 -0.22 -1.81 -0.35 -0.82 0.69 1.35 -1.05 -2.21 0.51 1.49
- 4.18 - - - - - -1.97 - - - - 0.68 - - - - - - -
- - - - - - - - - - - - - - - - - - - -
0.99 -1.52 -1.82 - 0.13 -0.97 -2.34 -0.45 -0.29 -0.78 -3.59 -3.59 2.45 2.27 -1.28 -0.49 -2.29 -0.71 -2.26 -0.31
- - - - - - 3.13 0.31 1.83 - - - - - - 2.07 - - 1.17 -
1.19 - - - - - - -0.41 - - 1.87 - - 1.5 -16.3 1.82 -7.37 1.44 1.48 0.53
- - - - - - - - - - - - - - - - - - 4.32 -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.