Heatmap: Cluster_28 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Egg apparatus cell (small)
Egg apparatus cell (medium)
Egg apparatus cell (large)
Ovary
Uninuclear microspore
Generative cell
Pollen
Sperm
Pollen tube (bicellular)
Pollen tube (tricellular)
Flower (bud, female)
Flower (bud, male)
Flower (female)
Flower (male)
Flower (tepals)
Fruit (female)
Apical meristem
Shoot (female)
Shoot (male)
Leaf (male)
Leaves
Root (male)
AMTR_s00001p00257010 (evm_27.TU.AmTr_v1.0_scaffold00001.346)
- - 3.06 -2.36 0.74 -1.01 - - -3.85 - 0.33 0.08 -1.19 -1.29 -0.1 -0.48 -1.9 - - 0.46 2.06 -0.74
AMTR_s00002p00147730 (evm_27.TU.AmTr_v1.0_scaffold00002.112)
- - - - 2.29 - -2.3 - -1.57 -2.29 -0.14 0.06 -0.3 -0.13 0.47 -0.51 0.94 - -1.3 0.51 2.29 0.97
AMTR_s00003p00101900 (evm_27.TU.AmTr_v1.0_scaffold00003.65)
- - 3.13 - 0.56 - -2.5 - -2.58 -3.7 0.12 -0.11 -2.46 -1.73 -1.07 -0.67 -1.09 -0.3 -1.46 -0.4 2.35 -1.94
AMTR_s00005p00186580 (evm_27.TU.AmTr_v1.0_scaffold00005.67)
-0.52 - 3.62 0.18 1.2 -2.11 - - - -5.55 -1.41 - -4.82 - - - -3.14 - -2.52 -1.57 2.07 -4.82
AMTR_s00006p00181630 (evm_27.TU.AmTr_v1.0_scaffold00006.76)
3.57 0.14 0.18 - 2.93 - - - -2.05 - - - - - - - - - - - - -
AMTR_s00006p00182960 (evm_27.TU.AmTr_v1.0_scaffold00006.78)
- - - - 2.37 - - - -2.48 -3.43 1.0 - -1.35 -2.72 -0.66 - - - - 0.5 3.53 -1.11
AMTR_s00006p00252490 (evm_27.TU.AmTr_v1.0_scaffold00006.163)
4.05 - - - -3.57 - - - -1.28 - -1.24 1.53 -1.59 - -5.0 - -3.19 -1.25 -0.82 -4.44 - -2.73
AMTR_s00006p00264570 (evm_27.TU.AmTr_v1.0_scaffold00006.267)
- - 3.61 - 0.1 - - - - - - - -0.58 -3.69 - - - - -0.43 -2.55 2.58 0.17
AMTR_s00008p00167080 (evm_27.TU.AmTr_v1.0_scaffold00008.90)
1.36 - 2.82 0.36 0.65 - - - - -6.07 -2.81 - -2.46 -2.47 -3.8 - 0.19 0.46 -2.28 -1.93 2.53 -2.87
AMTR_s00009p00244870 (evm_27.TU.AmTr_v1.0_scaffold00009.233)
- - - -2.28 2.45 - - - - -1.82 1.4 - -0.31 -1.53 -0.48 - 1.46 1.08 - -0.36 2.51 -2.06
AMTR_s00010p00024380 (evm_27.TU.AmTr_v1.0_scaffold00010.8)
2.36 - - -1.22 2.04 - -4.04 - -0.58 -2.64 0.33 -0.98 -0.82 -1.44 -1.26 -1.55 -0.04 - -2.15 -1.43 2.57 -1.15
AMTR_s00012p00216870 (evm_27.TU.AmTr_v1.0_scaffold00012.160)
2.72 - - - 1.5 - -3.87 - -2.54 -2.86 0.18 0.79 -1.01 -1.61 -0.86 - -3.34 0.6 0.12 -1.85 2.25 -2.15
AMTR_s00012p00262610 (evm_27.TU.AmTr_v1.0_scaffold00012.334)
- - - - 2.09 - -4.21 - -1.56 -3.4 0.17 - 0.78 1.12 0.55 - 0.02 - 0.74 0.42 2.65 -1.04
AMTR_s00014p00175570 (evm_27.TU.AmTr_v1.0_scaffold00014.61)
0.02 - 2.64 - 0.97 - -4.24 - -2.62 - - 0.38 -2.53 -4.62 -3.12 - -1.6 1.77 -0.97 0.75 2.03 -0.14
AMTR_s00016p00025600 (evm_27.TU.AmTr_v1.0_scaffold00016.9)
1.42 0.56 2.43 - -1.12 - -2.18 - -1.75 -2.73 -1.69 -1.43 -0.28 -1.82 -1.54 - 0.36 -0.04 -0.69 0.48 2.03 -0.23
AMTR_s00016p00153090 (evm_27.TU.AmTr_v1.0_scaffold00016.109)
0.97 -0.89 - -0.2 1.33 - -3.34 -1.14 -0.64 -1.41 0.73 0.05 -1.36 -0.45 0.38 -0.81 1.13 -0.25 -1.11 -0.0 1.82 -0.23
AMTR_s00017p00248090 (evm_27.TU.AmTr_v1.0_scaffold00017.240)
4.18 - - - 1.21 - -2.26 - -0.55 -1.31 - - - -3.86 -2.18 - - - - - - -
AMTR_s00018p00083650 (evm_27.TU.AmTr_v1.0_scaffold00018.35)
- - - - 2.86 - - - - - - - - - - - - - - 0.52 3.59 0.33
AMTR_s00021p00121970 (evm_27.TU.AmTr_v1.0_scaffold00021.70)
4.16 - - - -0.9 - - - - -3.08 - 1.38 -2.97 -4.31 - - - - - - - -0.66
AMTR_s00021p00133720 (evm_27.TU.AmTr_v1.0_scaffold00021.86)
3.54 - - - 2.73 - - - - - 0.89 - -1.27 - 0.12 - - - - -2.54 - -2.26
AMTR_s00021p00179460 (evm_27.TU.AmTr_v1.0_scaffold00021.136)
- - - - 2.64 - - - -1.09 -0.96 0.55 -13.4 -1.46 -0.2 - - - - 2.07 - 2.98 -
AMTR_s00021p00246170 (evm_27.TU.AmTr_v1.0_scaffold00021.266)
- - - - 1.76 - - - -1.93 -1.39 1.63 - - -0.16 -0.48 0.94 - - 1.86 -0.58 2.74 -1.51
AMTR_s00022p00032270 (evm_27.TU.AmTr_v1.0_scaffold00022.16)
2.07 -0.04 0.38 -7.15 2.17 -3.46 -0.74 -1.35 -0.63 -0.99 0.85 0.31 -1.49 -0.95 -0.03 -1.65 -0.21 -0.38 -0.88 -1.37 -0.98 -1.02
AMTR_s00022p00245400 (evm_27.TU.AmTr_v1.0_scaffold00022.362)
- - - -3.17 2.0 - -1.87 - -1.73 -1.68 1.34 - 0.2 -0.29 -0.04 - 0.54 0.68 - 1.22 2.52 -1.28
AMTR_s00027p00220730 (evm_27.TU.AmTr_v1.0_scaffold00027.90)
2.38 - - - 2.78 - - - - - - - - - - - 1.59 - - - 2.79 -
AMTR_s00028p00090000 (evm_27.TU.AmTr_v1.0_scaffold00028.25)
4.17 - - - 1.89 - - - - - - - - - -1.57 - - - - - - -
AMTR_s00030p00242200 (evm_27.TU.AmTr_v1.0_scaffold00030.212)
- 1.58 1.88 - -1.03 -2.17 -4.35 - -3.32 -3.72 0.6 0.15 -0.56 -0.54 -0.72 -0.27 -0.26 -0.55 -0.23 -0.28 2.32 -0.32
AMTR_s00031p00215140 (evm_27.TU.AmTr_v1.0_scaffold00031.106)
- - - - 2.05 - - - - - - - -1.23 - 1.42 - 1.55 - - 0.8 3.34 -
AMTR_s00032p00113220 (evm_27.TU.AmTr_v1.0_scaffold00032.74)
- - 3.19 -0.42 -0.62 - - - - - - - - -4.32 -1.91 - - - - -0.58 3.3 -0.59
AMTR_s00038p00069390 (evm_27.TU.AmTr_v1.0_scaffold00038.29)
- - 1.49 - 1.74 -0.21 -4.18 - -2.48 -2.39 1.15 - -3.12 -3.53 -0.87 -1.86 -3.38 1.52 -0.25 1.16 2.33 -2.0
AMTR_s00038p00092500 (evm_27.TU.AmTr_v1.0_scaffold00038.44)
3.25 - - - - - -6.33 - -6.19 -5.07 - -1.52 - -4.52 -5.61 - - 0.61 1.38 -1.11 2.89 -
AMTR_s00038p00093840 (evm_27.TU.AmTr_v1.0_scaffold00038.45)
3.0 - - - -2.83 - - - - -4.92 -3.93 -2.15 -5.01 -6.4 -7.13 - - -1.34 0.9 -0.65 3.41 -
AMTR_s00040p00036020 (evm_27.TU.AmTr_v1.0_scaffold00040.16)
4.25 - - - 1.11 - - - - -4.09 - - - - -2.45 - -1.06 - - - - -3.37
AMTR_s00040p00232610 (evm_27.TU.AmTr_v1.0_scaffold00040.286)
- - - - 2.36 - -3.62 - -2.47 -3.56 -0.03 0.73 -0.38 -2.71 0.13 - 1.51 - - -0.07 2.97 -2.03
AMTR_s00041p00226480 (evm_27.TU.AmTr_v1.0_scaffold00041.264)
- -3.16 - - 2.14 - - - - -3.53 -0.76 0.07 0.35 -1.1 0.73 -0.5 2.17 - -1.1 -1.17 2.3 0.37
AMTR_s00043p00171510 (evm_27.TU.AmTr_v1.0_scaffold00043.42)
2.59 - - - 1.95 - - - - - -0.18 - -1.31 -1.78 -0.11 - 0.41 - - -1.42 2.88 -0.88
AMTR_s00045p00056700 (evm_27.TU.AmTr_v1.0_scaffold00045.38)
- - - -1.58 2.43 - -1.71 - -0.84 0.33 1.5 - -18.18 -0.09 -0.43 - - 2.8 - - 1.44 -
AMTR_s00048p00209990 (evm_27.TU.AmTr_v1.0_scaffold00048.186)
1.86 - 0.66 0.39 1.4 - -0.53 -3.04 -0.05 -0.2 -0.05 0.05 0.37 -0.16 0.16 -0.24 0.04 -1.22 -0.63 -0.6 -1.74 -0.04
AMTR_s00049p00230810 (evm_27.TU.AmTr_v1.0_scaffold00049.280)
4.14 - - - 0.45 - - - - - 0.36 - -0.21 - -3.63 - - - - -3.59 - -0.46
AMTR_s00054p00091550 (evm_27.TU.AmTr_v1.0_scaffold00054.30)
3.15 - - - -3.13 - - - - -1.76 1.02 - -0.13 -1.81 -0.98 - 0.24 - -0.13 -0.93 2.46 -0.27
- - - - 2.09 - -4.15 - -4.04 -4.09 1.84 1.72 -1.78 -2.0 -2.59 - 0.58 - - -0.62 2.95 -3.34
AMTR_s00057p00034960 (evm_27.TU.AmTr_v1.0_scaffold00057.13)
- - - - - - 0.31 - - - - - - - 1.54 - 1.88 - - 0.57 3.67 -
AMTR_s00058p00041080 (evm_27.TU.AmTr_v1.0_scaffold00058.12)
- - - - 1.7 - - - - -2.31 1.52 - - -0.16 - - - - 1.04 - 3.63 -1.61
AMTR_s00059p00023330 (evm_27.TU.AmTr_v1.0_scaffold00059.7)
3.0 - 1.75 - 2.49 - -1.19 - -1.15 -1.0 - - -3.87 -4.05 -0.8 -0.95 - - 0.59 -2.19 -0.73 -3.5
AMTR_s00060p00124060 (evm_27.TU.AmTr_v1.0_scaffold00060.62)
4.24 - - - 0.56 - -4.09 - - - - 0.47 - - -4.55 - - - - - - -3.31
AMTR_s00061p00197390 (evm_27.TU.AmTr_v1.0_scaffold00061.234)
3.07 - - - 1.81 - -3.05 - -3.13 -4.02 1.17 -0.06 -0.32 -1.12 0.67 -0.62 -1.29 -0.99 -0.5 -0.7 -0.73 -1.9
AMTR_s00062p00154230 (evm_27.TU.AmTr_v1.0_scaffold00062.141)
4.17 - - - 2.02 - - - - - - - - - - - - - - - - -
AMTR_s00062p00206800 (evm_27.TU.AmTr_v1.0_scaffold00062.223)
4.02 - 1.17 - 0.0 - - - - -5.85 -3.46 -0.54 -1.83 - -0.5 - -2.06 - - - - -1.06
AMTR_s00064p00154150 (evm_27.TU.AmTr_v1.0_scaffold00064.63)
- - - - 1.12 - - - - - - - -0.55 - -1.36 - 2.72 - - -0.34 3.51 -
AMTR_s00067p00107620 (evm_27.TU.AmTr_v1.0_scaffold00067.86)
- - 2.03 -0.11 -0.3 -3.39 -7.63 -6.58 -4.17 -5.9 -0.05 0.66 -5.06 -2.94 -2.08 0.39 -0.16 0.57 -0.35 -0.77 2.96 -2.0
AMTR_s00069p00158880 (evm_27.TU.AmTr_v1.0_scaffold00069.131)
- - - -2.02 2.31 - - - - - 1.08 - 0.11 1.14 0.04 - 1.28 - - 0.12 2.61 -0.47
AMTR_s00070p00056180 (evm_27.TU.AmTr_v1.0_scaffold00070.23)
3.61 - 0.63 - 1.81 - 1.23 - -1.29 -0.92 - - - -0.83 -1.5 - - - - -0.9 - -
0.52 -1.12 -0.62 -1.18 1.67 - -2.84 -4.39 -2.26 -2.2 -0.26 -0.5 0.52 -0.4 0.3 -2.28 0.65 -0.77 -1.28 0.64 2.36 -0.37
AMTR_s00073p00041350 (evm_27.TU.AmTr_v1.0_scaffold00073.9)
- -2.99 - -0.63 2.1 - - - -3.61 - -0.86 - 0.41 -1.2 -0.25 - 1.83 - -0.35 1.43 2.56 -0.38
AMTR_s00073p00179510 (evm_27.TU.AmTr_v1.0_scaffold00073.57)
3.44 - - - 2.67 - - - - -2.92 - - -1.19 -2.7 -1.49 - 0.74 - - -0.46 - 0.41
AMTR_s00078p00120940 (evm_27.TU.AmTr_v1.0_scaffold00078.95)
3.21 - - - 2.32 - -4.95 - -0.88 -2.94 - 1.62 -2.23 -1.02 0.51 - -1.95 - - -0.76 -0.32 -2.39
AMTR_s00086p00176220 (evm_27.TU.AmTr_v1.0_scaffold00086.113)
0.47 - 2.81 -2.31 0.56 - -1.4 - -1.8 -1.51 -0.64 0.83 -0.53 -1.74 -1.56 -1.74 -1.31 1.22 -0.48 -1.43 1.46 -1.68
AMTR_s00087p00152520 (evm_27.TU.AmTr_v1.0_scaffold00087.51)
- - 3.9 - 0.95 - - - -2.05 - - - -1.87 - -0.33 - - - - - 1.94 -
AMTR_s00089p00090630 (evm_27.TU.AmTr_v1.0_scaffold00089.47)
2.97 - - -2.72 0.3 - - 0.97 -4.38 - -1.37 - - - -3.89 -0.15 - - - - 3.24 -
AMTR_s00090p00138580 (evm_27.TU.AmTr_v1.0_scaffold00090.72)
4.17 - - - 0.55 - - - - -4.42 -1.48 - -2.08 - 0.27 - - - - - - -0.62
AMTR_s00090p00155130 (evm_27.TU.AmTr_v1.0_scaffold00090.85)
- - 2.96 0.99 -1.12 - -2.75 - -3.67 -4.17 - - -4.77 -4.28 -1.55 - - - - - 3.44 -2.69
AMTR_s00095p00148510 (evm_27.TU.AmTr_v1.0_scaffold00095.116)
4.2 - - - 1.88 - - - - - - - - - - - - - - - - -
AMTR_s00096p00055800 (evm_27.TU.AmTr_v1.0_scaffold00096.25)
3.36 - - -0.03 2.13 - -3.65 - -4.48 - 0.53 - -0.5 -2.28 0.78 - - - - -0.63 0.41 -2.18
AMTR_s00096p00111460 (evm_27.TU.AmTr_v1.0_scaffold00096.69)
- - 2.9 -1.9 -0.5 -1.0 - - -4.77 -3.5 -2.8 - -4.06 -5.57 -0.6 - - - - -1.88 3.55 -4.85
AMTR_s00096p00169750 (evm_27.TU.AmTr_v1.0_scaffold00096.116)
- - - -3.3 1.92 - -4.65 - -2.15 -3.0 2.26 0.11 -1.47 -3.04 -0.51 - 1.17 - -1.25 0.13 2.76 -2.59
AMTR_s00103p00142220 (evm_27.TU.AmTr_v1.0_scaffold00103.99)
2.09 - - -1.85 1.86 - -3.07 - -1.27 -3.62 1.04 - -0.94 -0.88 -3.05 0.03 -0.47 - - -0.92 2.83 -0.72
AMTR_s00110p00120920 (evm_27.TU.AmTr_v1.0_scaffold00110.94)
0.95 - - - 1.96 - -3.53 - -1.57 -2.94 1.09 - -0.53 -1.56 0.07 -0.12 0.34 -0.33 -2.31 -0.61 2.83 -1.19
-2.23 - 1.48 - 1.68 - -4.88 - -1.21 -1.02 -0.12 0.86 0.13 -1.04 1.28 - 1.16 - -1.49 -0.39 1.95 -0.22
AMTR_s00115p00122640 (evm_27.TU.AmTr_v1.0_scaffold00115.18)
- - 4.18 - 0.84 - - 1.07 - - - - - - - - - - - - - -
AMTR_s00121p00130060 (evm_27.TU.AmTr_v1.0_scaffold00121.37)
- - - - 1.93 - - - -1.86 -2.77 0.17 - 0.03 -2.3 -0.09 - 2.17 - 0.6 0.31 2.61 0.19
AMTR_s00133p00066320 (evm_27.TU.AmTr_v1.0_scaffold00133.23)
0.35 - 3.43 -2.37 0.23 -2.02 -4.79 - -4.16 -2.1 -0.3 -0.07 -2.15 -4.26 -2.81 -0.05 -2.05 - -2.24 -3.08 2.05 -2.48
AMTR_s00139p00051960 (evm_27.TU.AmTr_v1.0_scaffold00139.5)
- - 2.26 - -2.29 - - - - - - - - - - - - 0.31 -0.67 0.88 3.73 -
AMTR_s00143p00108380 (evm_27.TU.AmTr_v1.0_scaffold00143.29)
- - - - 0.19 - - - - - - - - - -1.73 - 2.91 - - - 3.7 -
AMTR_s00155p00067910 (evm_27.TU.AmTr_v1.0_scaffold00155.42)
2.24 - - - 2.32 - -1.98 -4.2 -2.29 -3.35 -1.38 0.71 -0.47 -0.74 0.64 -2.17 -0.38 - -0.92 -0.61 1.85 -0.02
AMTR_s00161p00055270 (evm_27.TU.AmTr_v1.0_scaffold00161.19)
- - 2.43 - 0.27 - - - - - - - -1.78 - - - - - - - 3.92 -
AMTR_s00170p00015580 (evm_27.TU.AmTr_v1.0_scaffold00170.3)
- - 3.49 0.34 -0.54 - - - - -5.22 -2.19 - -1.73 -2.62 -3.04 -0.97 0.13 - -0.48 - 2.45 -2.38
AMTR_s00173p00058630 (evm_27.TU.AmTr_v1.0_scaffold00173.15)
- - - -1.66 1.64 - -3.98 - -1.38 -1.74 0.85 1.18 0.23 -0.49 1.78 - 0.8 - -0.62 -1.2 2.33 -0.79
AMTR_s00186p00028360 (evm_27.TU.AmTr_v1.0_scaffold00186.9)
- - - - 1.75 - - - - - - - -0.68 - - - 2.72 - - - 3.51 -
AMTR_s00196p00023290 (evm_27.TU.AmTr_v1.0_scaffold00196.1)
- - 3.65 - 0.1 - - - - - - - - - -2.8 - - - - - 3.05 -
AMTR_s01481p00000760 (evm_27.TU.AmTr_v1.0_scaffold01481.1)
3.03 - - -1.4 0.21 - - - - - - - - - - - - - - 0.85 3.39 -
AMTR_s01641p00008060 (evm_27.TU.AmTr_v1.0_scaffold01641.1)
2.07 - 2.62 - -0.34 - -2.98 - -1.04 -1.87 -1.27 - -0.94 -2.87 -1.02 - 0.31 -0.09 -0.1 -0.12 1.98 -1.3
AMTR_s02053p00004280 (evm_27.TU.AmTr_v1.0_scaffold02053.1)
1.74 - 2.13 - -2.9 - - - -3.67 - - - -2.24 - - 2.02 - - - - 3.3 -
AMTR_s02053p00006710 (evm_27.TU.AmTr_v1.0_scaffold02053.2)
2.32 - 0.68 - - - - - - - - - -0.32 - -3.67 - - 1.32 - - 3.59 -
AMTR_s02148p00006070 (evm_27.TU.AmTr_v1.0_scaffold02148.1)
- - - - 2.22 - - - -2.93 - 0.63 - 1.2 0.26 0.27 - 0.42 - -19.13 -0.4 3.15 -
AMTR_s02215p00001550 (evm_27.TU.AmTr_v1.0_scaffold02215.1)
2.59 - 2.28 - - - - - - - - - -0.09 - - - -1.01 - - - 3.25 -2.74
AMTR_s02353p00005690 (evm_27.TU.AmTr_v1.0_scaffold02353.1)
- - - - 2.54 - -3.27 - -2.12 -2.47 1.4 - 0.7 -1.29 0.13 - 1.67 - - -2.0 2.59 -1.16
AMTR_s02362p00008800 (evm_27.TU.AmTr_v1.0_scaffold02362.1)
0.29 2.3 3.42 - -3.44 - - - - - - - - - - - - - - - 2.34 -
AMTR_s02445p00001770 (evm_27.TU.AmTr_v1.0_scaffold02445.1)
3.87 - - - 2.79 - - - - - - - - - -2.08 - - - - -2.11 - -
AMTR_s03490p00005860 (evm_27.TU.AmTr_v1.0_scaffold03490.3)
2.87 - - 0.05 2.31 - -3.81 -0.71 - - - - - - -2.5 - - - - - 2.94 -2.9
AMTR_s03898p00003870 (evm_27.TU.AmTr_v1.0_scaffold03898.1)
4.34 - - - 0.59 - - - -1.99 - - - - - - - - - - - - -
0.48 1.31 - -0.25 1.12 - -4.32 - -4.35 -3.62 1.1 1.3 -0.3 -2.79 -1.9 - -0.24 1.18 - -0.62 2.19 -0.41
2.72 - - - 0.35 - -3.35 - -1.46 -3.75 - - -1.74 -2.25 -2.9 - 1.49 - - - 3.34 -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.