Heatmap: Cluster_338 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Root
Root differentiation zone
Root elongation zone
Root heading stage
Root meristematic zone
Root tillering stage
Leaf
Leaf (Azucena)
Leaf (Kinandang puti)
Leaf (Pandan wangi)
Leaf (Tadukan)
Leaf chilling-treatment (4C, 33h)
Leaf drought-stress 1 day
Leaf drought-stress 3 days
Leaf drought-stress 15 min (Azucena)
Leaf drought-stress 45 min (Azucena)
Leaf drought-stress 90 min (Azucena)
Leaf drought-stress 135 min (Azucena)
Leaf drought-stress 90 min, recovery 15 min (Azucena)
Leaf drought-stress 90 min, recovery 60 min (Azucena)
Leaf drought-stress 90 min, recovery 90 min (Azucena)
Leaf drought-stress 90 min, recovery 150 min (Azucena)
Leaf drought-stress 90 min, recovery 210 min (Azucena)
Leaf heat-stress 15 min (Azucena)
Leaf heat-stress 45 min (Azucena)
Leaf heat-stress 75 min (Azucena)
Leaf heat-stress 135 min (Azucena)
Leaf heat-stress 165 min (Azucena)
Leaf heat-stress 210 min (Azucena)
Leaf heat-stress 240 min (Azucena)
Leaf heat-stress 120 min, recovery 15 min (Azucena)
Leaf heat-stress 120 min, recovery 45 min (Azucena)
Leaf heat-stress 120 min, recovery 75 min (Azucena)
Leaf heat-stress 120 min, recovery 105 min (Azucena)
Leaf heat-stress 120 min, recovery 120 min (Azucena)
Leaf dry season, irrigated field (Azucena)
Leaf dry season, rainfed field (Azucena)
Leaf wet season, irrigated field (Azucena)
Leaf wet season, rainfed field (Azucena)
Leaf infected with Xanthomonas oryzae
Flower buds
Flowers
Panicle
Panicle booting stage
Pollen
Sperm
Milk grains
Seeds
Callus
Seedling
Seedling 12-day-old (DongJin)
Seedling 12-day-old (DongJin, mutant)
Seedling 22-days-old, leave blades only, 22 C (Zhongxian 3037)
Seedling 22-days-old, leave blades only, 30 C (Zhongxian 3037)
LOC_Os01g23580 (Os01g0337500)
0.76 -2.9 -4.34 1.18 -0.3 0.89 -0.9 -8.36 -4.9 - -8.19 -3.32 - -8.13 - - - - -6.42 - -6.2 -5.6 -6.34 - - - - - - - -6.28 - - -4.44 -5.98 -7.66 -8.57 -6.65 -7.38 -2.23 -2.62 -2.69 -2.88 -4.29 0.61 5.39 -3.03 -2.32 -2.7 -1.22 -1.62 -2.69 -1.7 -1.03
LOC_Os06g38950 (Os06g0589300)
0.74 0.12 0.51 1.05 -1.13 0.76 -1.8 -3.81 -4.28 -4.04 -4.03 -6.34 -5.59 -4.79 -3.69 -3.56 -3.31 -2.84 -3.32 -3.26 -3.23 -3.32 -3.77 -7.2 -5.61 -3.96 -3.9 -4.13 -3.82 -3.27 -3.49 -4.11 -3.8 -4.31 -3.66 -3.77 -3.77 -3.8 -3.51 -4.09 -3.08 -3.13 -3.84 -6.15 0.38 5.35 -5.95 -6.19 -4.27 -1.52 -3.75 -3.61 -5.56 -4.83
LOC_Os09g16000 (Os09g0328951)
-3.73 -6.62 -3.72 0.73 - 0.8 -2.7 -4.75 -9.14 -9.18 -6.4 -2.37 -2.59 -3.19 -5.43 - -3.41 -1.77 - - -3.9 - -3.18 -3.96 - - -1.4 -2.61 -4.54 -2.56 -2.8 -2.98 - -2.12 -3.44 -5.14 -5.12 -3.55 -5.07 -4.62 -4.15 -4.37 -1.34 -0.59 1.44 5.38 -4.37 -3.99 -1.23 -1.06 -8.12 -4.83 -0.97 -1.05
LOC_Os09g21430 (Os09g0382000)
-5.92 -0.33 -1.06 0.72 0.93 0.57 -12.44 - -8.17 -2.54 -5.95 - - - - - - -1.32 - - -3.17 - - - - - - - - - - - - - - - - - - - -1.44 -1.69 -1.02 0.7 1.91 5.27 -4.5 -3.69 -0.87 -2.84 -1.52 -0.9 - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.