Heatmap: Cluster_341 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Fertile Leaflet with Sori
Primary Rachis
Secondary Rachis
Petiole
Crozier
Rhizome
Root
Msp_g00213 (PSAN)
1.17 -0.48 0.56 -0.46 0.23 -1.01 -2.66
0.86 -0.28 0.27 -0.61 0.25 -0.31 -0.97
Msp_g01322 (PSRP5)
0.99 -0.5 0.32 -0.52 0.08 -0.4 -0.88
Msp_g01519 (FRD4)
0.54 -0.07 0.13 -0.05 -0.07 -0.11 -0.59
Msp_g01556 (LHCA2)
1.32 -1.14 0.64 -1.17 0.35 -0.89 -2.16
0.67 -0.63 0.26 -0.62 0.52 0.01 -1.07
0.75 -0.4 0.35 -0.32 -0.08 -0.1 -0.7
0.68 0.02 0.24 -0.03 0.04 -0.35 -1.27
1.1 -0.31 0.29 -0.48 -0.12 -0.35 -1.36
Msp_g04977 (PSB27)
1.56 -2.27 0.65 -2.24 0.65 -1.15 -4.39
Msp_g05519 (PTAC16)
0.91 -1.06 0.56 -1.02 0.67 -0.08 -2.99
1.23 -0.7 0.25 -0.82 0.4 -0.64 -1.63
Msp_g07842 (HEMC)
1.14 -0.76 0.21 -0.74 0.48 -0.52 -1.47
1.06 -0.94 0.15 -0.96 0.7 -0.48 -1.25
Msp_g07998 (LHCB2)
1.17 -1.2 0.31 -1.3 0.87 -0.33 -4.26
Msp_g08008 (CYP38)
1.08 -1.0 0.21 -1.08 0.86 -0.44 -2.25
Msp_g08662 (SIGB)
0.86 -0.48 0.34 -0.52 0.46 -0.37 -1.48
0.7 -0.13 0.3 -0.18 -0.15 -0.17 -0.85
Msp_g09112 (PSAO)
1.15 -1.26 0.93 -1.43 0.69 -1.19 -4.55
Msp_g09825 (CHLM)
1.26 -1.19 0.73 -1.04 0.33 -0.8 -2.35
Msp_g09863 (ACSF)
1.07 -0.84 0.47 -0.99 0.57 -0.32 -2.67
Msp_g10077 (HEME2)
1.08 -0.49 0.25 -0.66 0.2 -0.47 -1.05
0.82 -0.34 0.64 -0.39 -0.26 -0.46 -0.84
Msp_g10513 (V157)
0.72 -0.39 0.07 -0.48 0.39 -0.05 -0.91
0.95 -0.45 0.64 -0.38 -0.05 -0.5 -1.57
1.17 -0.65 0.38 -0.71 0.17 -0.59 -1.29
1.63 -1.16 0.33 -1.63 0.49 -1.18 -4.71
1.33 -1.14 0.49 -1.08 -0.47 -0.57 -0.39
1.07 -0.39 0.32 -0.5 -0.36 -0.33 -0.69
0.79 -0.16 0.45 -0.18 -0.08 -0.68 -0.86
1.15 -0.63 0.1 -0.38 0.29 -0.49 -1.48
0.81 -0.31 0.49 -0.17 -0.13 -0.35 -1.16
Msp_g14311 (SCY1)
0.83 -0.33 0.5 -0.4 -0.03 -0.49 -0.86
1.18 -0.75 0.57 -0.9 -0.16 -0.36 -1.2
Msp_g14767 (RVE1)
0.73 -0.64 0.36 -0.59 0.56 -0.54 -0.78
1.19 -0.29 0.79 -0.73 0.33 -1.78 -5.56
1.12 -0.97 0.81 -1.39 0.74 -1.14 -4.31
1.39 -0.99 0.47 -0.48 0.13 -1.17 -2.09
0.82 -0.8 0.47 -0.7 0.51 -0.13 -1.63
Msp_g18796 (GSTL3)
0.75 -0.25 0.56 -0.4 0.06 -0.48 -1.02
Msp_g19440 (CCL)
1.38 -0.8 0.33 -0.98 0.49 -0.99 -2.68
1.28 -1.54 0.23 -1.4 0.93 -0.59 -3.22
0.58 -0.27 0.16 -0.2 0.14 -0.2 -0.48
0.48 -0.11 0.32 -0.06 -0.22 -0.05 -0.62
0.55 -0.03 0.2 -0.07 -0.14 -0.23 -0.52
Msp_g21619 (FKBP13)
0.59 -0.26 0.11 -0.28 0.24 -0.08 -0.66
Msp_g21846 (SVR1)
0.69 -0.33 0.28 -0.21 0.13 -0.36 -0.64
1.27 -0.61 0.36 -0.7 -0.09 -0.56 -1.25
1.39 -0.87 0.05 -0.87 0.34 -0.78 -1.32
1.46 -0.62 0.82 -1.08 0.04 -1.73 -4.83
Msp_g26835 (LHCB2)
1.49 -2.2 0.49 -2.48 0.89 -0.95 -6.23
1.44 -0.76 -0.09 -1.81 0.8 -0.99 -2.15
Msp_g28747 (LHB1B2)
1.61 -4.7 0.62 -4.74 0.84 -0.95 -5.18
Msp_g29015 (CCL)
1.24 -0.82 0.6 -1.05 0.52 -0.88 -3.41
0.84 -0.64 0.19 -0.7 0.51 -0.53 -0.53
1.46 -0.55 0.17 -0.96 0.39 -0.75 -4.97
Msp_g30120 (LEJ2)
1.03 -0.44 0.3 -0.45 0.2 -0.51 -1.31
0.64 -0.47 0.28 -0.53 0.43 -0.21 -0.75
0.61 -0.08 0.54 -0.29 -0.05 -0.39 -0.9
Msp_g31523 (ATB BETA)
0.53 -0.36 0.19 -0.36 0.4 0.04 -0.97
Msp_g31805 (CAF2)
0.75 -0.12 0.18 -0.17 -0.04 -0.24 -0.87
Msp_g32565 (CR88)
0.76 -0.29 0.29 -0.31 -0.12 -0.12 -0.71
Msp_g36675 (CRR7)
0.66 -0.29 0.17 -0.16 0.06 -0.27 -0.5
1.69 -3.29 0.98 -3.14 0.13 -1.26 -3.8
Msp_g43038 (GC1)
0.7 -0.38 0.32 -0.33 0.28 -0.24 -0.96
0.69 -0.23 0.25 -0.3 -0.03 -0.21 -0.54
Msp_g43684 (AKR2B)
1.05 -0.3 0.59 -0.33 -0.0 -0.83 -1.99
1.01 -0.59 0.33 -0.45 0.39 -0.59 -1.44
Msp_g44518 (PSBW)
1.13 -0.5 0.7 -0.6 0.26 -0.95 -3.34
1.24 -0.61 0.47 -0.32 0.1 -1.16 -1.88
Msp_g46776 (PSAL)
1.47 -1.54 0.74 -1.8 0.56 -1.45 -3.45
0.88 -0.36 0.35 -0.55 0.07 -0.21 -0.97
1.32 -0.58 0.51 -0.51 0.23 -1.27 -3.02
Msp_g48334 (PSBQ)
1.38 -1.55 0.7 -1.57 0.59 -1.17 -2.86

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.