Heatmap: Cluster_81 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Roots (apex), 7 DAG
Roots (differentation zone), 4 DAP
Roots (elongation zone), 4 DAP
Roots (meristematic zone), 4 DAP
Roots (stele cells), 7 DAS
Roots (tip)
Leaves (rosette), 21 DAG
Leaves (rosette), 29 DAG
Leaves (rosette), 35 DAG
Leaves (rosette), 42 DAG
Leaves (rosette), 57 DAG
Epidermis cells
Mature guard cells
Stems (internode)
Stems (internode), senescent
Meristem (M1-3), 7-9 DAG
Meristem (M4-6), 1-12 DAG
Meristem (M7-1), 13-16 DAG
Axis of the inflorescence
Pedicel
Flowers (receptacles)
Flowers (floral buds)
Flowers (sepals)
Flowers (petals)
Flowers (stamen filaments)
Flowers (anthers)
Flowers (carpels)
Flowers (ovules)
Stigmatic tissues
Pollen
Siliques
Siliques, senescent
Pods of Siliques
Pods of Siliques, senescent
Embryo
Endosperm
Seeds, dry
Seeds, from senescent siliques
Seeds, young
Seeds, germinating
Seedlings, 5 DAG
Seedlings, 11 DAG
Seedlings, 14 DAG
Seedlings, etiolated
0.89 3.51 2.72 -2.53 - -1.39 -0.45 -3.36 0.27 0.56 0.51 - - -0.12 1.46 -2.12 -4.67 -4.82 -1.4 -0.59 -0.9 -3.4 -1.04 -0.7 -0.23 1.18 -1.98 -0.18 -5.49 - -1.58 -3.11 -2.04 -0.56 - -4.09 - - 0.92 0.59 -1.45 -1.98 -0.8 0.67
- - - - - - - -1.45 -2.46 -2.24 -2.46 - 1.91 0.77 4.6 - -0.5 - 1.83 - - - - - - -0.36 -2.39 - - -0.73 - - - 2.81 - - - - -3.13 - - - - -1.52
-3.05 -2.47 -5.18 -6.63 -1.2 -8.55 -4.25 0.96 2.72 3.17 2.22 1.59 -5.26 1.99 2.23 -7.52 -7.27 -8.82 -4.4 -2.5 -4.54 -3.68 0.36 -2.95 -6.39 -2.91 -0.77 -6.42 -6.03 -8.55 0.82 -3.1 0.71 -0.77 -2.62 0.4 -2.11 -7.56 -3.33 -2.37 -4.03 -3.82 -2.06 -2.11
3.2 3.08 2.21 -5.46 - -0.95 - -3.38 -4.54 -2.67 -2.24 -5.94 - -3.03 -3.09 -3.43 -3.3 -1.63 -4.02 -4.43 -6.73 -1.83 -6.94 - -6.52 1.41 -1.02 0.03 -1.88 - -4.5 -1.11 -2.59 -2.73 -3.55 -1.69 -5.5 -1.6 -4.66 0.62 0.43 -5.04 0.2 3.22
AT1G19610 (LCR78)
- -3.95 - - - - -4.02 1.16 1.86 3.62 3.83 -1.69 1.13 - -1.2 -8.67 -5.67 -4.76 -5.38 -4.8 -4.79 - -4.0 - - -6.55 -3.95 - - - -3.9 -2.03 -5.38 -6.55 -6.25 -1.26 -3.02 -0.94 -7.24 -2.21 2.32 -4.42 -2.27 0.45
AT1G43160 (RAP2.6)
-1.99 4.1 2.35 -6.14 -3.53 -3.44 0.23 -6.37 -4.42 -2.85 -5.29 1.4 -0.43 -0.28 -6.16 - -8.7 -10.32 - -6.6 -5.5 -2.28 -5.72 - - -6.21 -1.05 -9.04 -6.54 - -3.9 1.37 -4.59 1.14 - -4.75 1.68 1.08 -10.41 0.48 -0.49 -8.05 -1.69 1.15
- -3.13 - - - - 0.5 - 0.41 0.96 0.04 4.0 -0.1 0.81 - - - - -1.4 -1.32 1.97 1.35 -0.78 - - - -2.15 -4.0 -3.07 - -1.26 - -1.61 - - -4.04 - - -3.77 -1.05 3.09 -1.43 -0.94 -1.14
- - - - - - - - - -0.58 0.73 - - - - - - - - - -1.62 - -2.08 - - -0.15 -3.14 - - - - 1.95 - 5.12 - 0.65 - - - - - - - -
0.17 0.55 -1.15 -5.03 - -4.16 -3.22 2.18 3.62 3.42 2.82 -2.22 -9.77 -3.69 -2.92 -6.7 -6.77 -6.45 -7.84 -6.32 -3.88 - -3.68 -10.05 -6.81 -8.54 -6.2 -5.57 -7.46 - -5.73 -10.08 -6.53 -8.01 - -3.61 -10.33 -9.52 -0.85 -1.78 1.17 -4.2 -1.54 0.92
AT1G66550 (WRKY67)
- 2.09 1.08 - - -0.67 2.35 - 0.07 0.88 0.8 0.31 - - - -0.96 - -2.04 - - 3.85 - 0.65 - - 2.51 -1.51 - - - -1.01 - - - - - 0.75 - - -1.38 -0.57 - - -
AT1G66570 (SUC7)
- - - - - - - -5.87 - -2.56 -0.36 -0.63 -0.92 - - - - - - - 2.11 - -3.14 - - -4.99 -3.77 - - - -5.87 1.59 - 5.08 - -2.67 - -4.84 -1.38 - - - - -
-0.07 2.56 -0.88 - - -3.04 -3.19 -3.61 -2.85 -3.29 -3.81 -3.65 - - - -2.38 -4.04 - - - -5.18 -0.71 - - - - 0.71 -1.42 2.85 - -0.62 - -2.32 -3.65 3.36 -0.74 - - -1.48 0.99 -0.76 -0.75 -0.54 3.29
- - - - - - - - - - - 4.51 - 0.93 2.82 - - - - - - - - 0.85 - 0.29 - - - - - - - 2.01 1.08 0.49 0.45 - - - - - - -2.13
- - - - - - -3.32 0.73 2.14 3.12 3.68 - - - -2.07 -2.27 -1.76 -7.14 - - - - -5.24 - - - -9.22 - - - -4.25 - -6.9 -1.32 - -6.85 - - -2.95 -4.86 3.85 -2.26 -2.51 -3.35
AT2G19190 (FRK1)
1.04 2.52 -2.2 - -0.23 - -2.33 -0.44 2.12 2.24 2.95 -3.06 - -1.41 -1.21 - - - - - 2.03 -3.84 -0.59 - - 0.02 -4.88 -3.88 -3.93 -1.98 -6.7 - -6.91 -1.77 -2.13 -2.55 -0.88 - -0.33 -0.46 2.52 -1.07 -2.81 0.06
- - - - - - 0.13 - 1.2 -0.14 0.53 - - - - - - - - - - - -0.58 - - - - - - - - - - - - - - - - - 5.23 - - -
-6.22 -5.0 -8.33 -9.62 4.87 - -1.79 -7.12 -7.69 -3.55 -2.66 1.91 -0.15 -1.9 -3.14 - -11.31 -8.66 - -5.8 -2.06 0.45 -5.43 -0.96 -3.03 2.24 -4.15 -7.39 -7.7 - -5.29 -1.48 -7.0 0.04 - -7.48 -3.59 -2.27 -10.2 -9.77 -6.74 - - -1.64
-2.85 1.96 -1.54 -1.57 -7.76 -3.82 -1.43 -3.09 -4.73 -2.83 -1.79 1.29 -0.43 -2.26 -1.36 0.42 -1.0 -2.67 -1.82 -1.45 -2.13 -3.84 -0.8 -6.13 -6.75 -3.12 -2.34 -4.12 -2.31 -6.34 0.2 2.22 -0.55 -1.6 -1.78 0.95 3.49 2.61 -4.42 -0.97 1.02 -2.3 -1.25 -0.37
AT2G39200 (MLO12)
1.0 2.67 1.04 -0.78 - -1.38 -5.19 -2.82 -0.78 -0.89 -1.84 4.19 2.51 -3.86 -3.69 -9.53 -11.89 -10.08 - -8.01 0.3 -5.7 -3.86 -5.51 -4.27 -5.3 -5.66 -6.15 -3.9 - -4.61 -3.67 -4.65 -0.37 -8.16 -3.62 -8.79 -7.95 -3.66 -2.23 1.74 -6.33 -3.62 -0.54
1.79 3.44 0.49 -1.83 - -2.9 -3.49 -2.97 -1.93 1.05 1.96 0.95 1.91 - -1.45 -10.11 -5.7 -7.7 - -4.87 2.02 -6.47 -3.55 - - -2.69 -4.11 -2.98 -1.75 - -6.3 -3.49 - -0.88 - -4.68 -5.38 -4.88 -4.0 -0.2 2.25 -4.18 -1.34 1.86
0.64 1.15 1.76 -0.44 -5.39 0.69 -0.19 -1.09 1.07 1.35 0.52 -6.18 -2.87 0.66 1.36 -2.21 -2.07 -1.93 -1.13 -0.96 -0.46 -0.04 -0.58 0.53 0.74 -3.21 -1.07 -1.91 1.36 -5.89 0.88 -2.03 0.79 1.42 -4.83 -1.59 -7.72 -6.37 -0.75 0.14 -0.77 -1.16 -0.08 0.7
-2.8 -0.65 -3.05 -4.09 - -4.93 1.02 -0.8 -1.06 -0.75 -0.47 0.12 -5.53 -3.78 -2.16 -2.78 -3.57 -1.15 -1.53 -3.56 -1.28 -7.22 -1.56 - -8.59 -4.36 -0.46 -3.61 -3.95 - -3.16 -7.09 -3.22 -5.4 -7.09 -9.7 - -9.91 2.25 -3.75 4.84 -4.17 -3.53 -1.03
-2.93 0.17 0.09 -3.0 3.12 -0.42 -1.34 -2.98 -1.88 -1.6 -1.45 -2.92 -8.66 -3.01 -0.69 -3.6 -1.8 -0.15 -0.89 -0.07 2.23 -0.66 0.25 0.01 0.15 -1.1 -0.61 -1.4 0.26 - -0.58 0.99 -0.38 2.03 -4.06 -5.08 0.62 0.26 -1.4 1.64 -2.57 -2.76 -0.56 -0.23
1.85 -1.25 1.85 1.03 -2.49 2.37 0.02 -0.97 -0.98 -0.64 0.32 -3.94 - -5.47 -1.69 -2.67 -3.52 -4.09 -3.64 -3.52 2.58 -3.28 -3.69 -6.61 - -5.42 -1.9 -1.24 0.82 - -3.82 -5.67 -4.5 -1.94 - -4.49 - -8.14 -1.65 -0.68 2.87 1.49 0.5 1.39
3.58 1.19 -0.26 0.86 - -0.53 0.38 -1.09 -0.26 -0.59 -0.63 -1.23 - -1.06 -1.82 -0.76 -0.54 0.04 0.92 1.66 -0.51 -1.53 0.5 -2.13 -2.3 -3.05 0.18 -0.6 -1.36 - -1.31 -4.66 -1.4 -4.58 -0.27 -0.01 -3.91 -3.0 -0.74 -0.29 1.12 -0.94 -0.82 0.28
0.94 2.71 2.08 -0.24 -3.32 0.28 -0.64 -2.06 -2.05 -2.94 -2.39 -2.24 -1.93 0.13 0.49 0.12 -0.5 -1.18 -0.84 -0.87 -0.01 -0.67 0.6 1.09 1.19 -2.3 -0.43 -1.71 1.91 -11.53 -0.27 -3.78 0.17 -2.96 -2.54 -1.5 -4.92 -4.1 -1.65 0.53 -0.5 -1.96 -0.22 1.33
AT3G53232 (DVL20)
- - - -2.83 - -3.95 -0.15 -1.1 -4.19 -6.6 -4.51 -0.25 -4.78 0.81 - 1.14 1.65 0.42 2.04 0.58 3.76 0.58 0.07 0.61 1.12 -4.72 0.43 -0.33 -0.61 - -0.7 -3.67 -0.96 -1.2 -1.5 -5.51 - - -4.09 -6.84 -0.09 -2.42 -0.32 -0.4
-0.87 -0.35 - -1.38 - -1.54 -1.22 -1.52 0.48 1.46 1.49 - - 0.98 2.43 0.4 1.64 -0.39 -1.2 -1.11 1.57 -1.52 0.98 0.52 -0.66 0.83 -1.95 -3.54 -1.61 - -0.48 -1.36 -1.07 - 1.42 1.38 - -2.59 -2.09 -0.28 -1.27 -0.56 -0.63 0.13
2.82 3.34 2.97 -0.68 - -0.68 - -3.58 -2.38 -2.32 -2.39 1.73 - - - - -7.55 -5.72 - - -3.69 - - -4.49 - -0.05 -4.32 -4.42 -3.69 -4.27 -7.25 - - - - -0.29 - - -2.13 -0.68 3.08 - -3.1 1.07
1.53 -1.91 - - - -4.99 1.34 1.84 1.52 2.27 1.2 - - -5.09 -1.81 1.75 -0.22 -2.26 - - -1.71 -3.07 -5.16 -2.95 - - -3.82 - - - -1.29 - -0.83 -2.37 - -4.16 - - -6.45 -1.99 2.63 2.71 0.37 1.93
AT4G12470 (AZI1)
-4.66 -4.19 - - - - -4.81 -0.04 0.02 0.28 0.38 -2.28 - -4.2 -0.12 -8.97 -8.51 -9.38 -10.85 -9.89 -6.79 - -9.66 - - -11.06 -10.5 - - - -9.96 -6.84 -9.95 -8.11 - - - - -7.08 -1.62 4.37 -4.64 0.15 3.99
AT4G12480 (pEARLI 1)
-3.67 -1.42 -9.25 - - -11.57 -4.65 -3.5 -3.06 -0.56 -1.69 -8.29 - - 0.88 -8.71 -9.63 -5.66 - - -8.89 - -4.33 - - -12.18 -10.04 -7.38 - - -8.29 -9.85 -8.57 -4.66 - - - -9.77 -4.18 -7.54 5.17 -5.46 0.31 1.61
-4.55 -3.27 -6.02 - - -8.22 -1.5 -1.8 -2.33 0.24 0.32 - - - 0.75 -5.24 -5.32 -6.57 - - -7.1 - -1.24 - - - - - - -7.31 -7.36 -7.55 - -7.61 -7.3 -7.22 - - - -4.71 5.25 -3.67 -4.4 -4.69
- -3.58 - - - - -3.75 -3.68 -3.87 -1.93 -1.96 - - - -1.66 - -7.55 -7.11 - - - - -4.62 - - - - - - - -12.77 - - - - -8.66 - - -10.17 -9.29 5.41 -6.63 -3.29 -4.71
-5.86 -2.05 -4.0 - - -6.81 0.55 -4.49 -4.6 -6.5 -4.99 -1.65 - 1.8 -3.36 -1.79 -3.59 -3.7 1.03 1.98 0.74 2.42 2.25 2.99 2.37 -5.04 -1.34 -3.11 -2.14 - -0.25 - -0.26 - - -4.53 - -6.58 -1.43 -1.12 -4.88 0.24 -0.82 0.82
AT4G21120 (AAT1)
-2.45 -1.14 -3.6 -1.08 - -1.95 -5.21 -1.7 0.51 2.06 2.47 -0.68 2.12 -5.85 1.17 -6.71 -7.91 -7.39 - -8.89 2.76 -0.89 -3.3 -7.57 -3.06 -0.84 -1.52 1.21 -8.5 -2.0 -4.33 0.18 -5.13 1.87 -8.28 -0.35 1.57 -0.27 0.42 -0.15 -2.05 -4.87 -3.84 -0.4
-2.61 -2.82 -5.9 -5.88 - -3.19 -3.54 0.01 2.21 2.71 1.95 -0.24 -2.81 -5.6 0.2 -4.55 -4.32 -4.29 - - 2.73 - -5.22 - -7.68 - -4.0 - -1.17 - -3.67 -2.27 -5.46 0.11 - 0.34 -8.25 -5.34 -7.1 -1.69 3.78 -4.98 -2.75 0.13
AT4G22950 (GL19)
3.21 -0.24 -3.43 -4.79 - - 1.65 1.0 1.48 2.19 2.14 - - -5.35 3.25 -1.75 -1.71 -2.46 -5.31 - -3.2 - -6.32 - -3.71 -0.74 -3.18 -5.36 - - -6.97 -3.55 -4.77 -1.01 - -2.55 -2.03 -4.34 -4.54 -4.2 -2.46 -0.47 1.78 -4.04
AT4G23300 (CRK22)
-6.75 - - - - -7.67 2.06 2.58 2.22 1.55 1.51 -2.47 - - -3.53 -3.81 -7.86 -8.09 - - - -1.25 0.17 - - -6.55 -3.17 -3.34 -0.72 - -1.1 - 0.27 - - -7.85 - - -7.6 -2.03 2.82 2.35 2.62 -1.16
AT4G23550 (WRKY29)
1.49 3.03 -2.97 -6.17 - -7.61 -1.67 -1.11 -0.19 -0.32 -1.14 0.57 -0.39 - -2.87 1.84 0.38 -1.96 - -7.19 0.63 - -3.99 - - -2.99 -1.73 -6.75 0.61 - -4.98 -3.59 -6.79 0.86 - -5.74 - - -4.1 1.71 2.32 -0.14 0.48 2.65
-1.21 0.39 -4.65 -4.86 - -7.47 -3.04 2.2 1.79 1.8 2.14 -5.34 - -3.16 1.95 -3.93 -5.42 -6.82 -5.16 -3.14 -0.16 -2.52 -3.09 -8.5 -5.93 -5.25 -1.43 -0.37 1.93 - -4.48 0.05 -4.25 -2.28 -7.27 -3.94 0.07 -0.12 -1.76 -2.41 3.15 -0.78 -1.03 0.9
-2.39 0.55 -1.46 -3.79 -4.62 -3.61 -0.87 -3.51 1.58 2.99 1.46 2.12 2.38 -1.88 1.42 -8.2 -8.27 -6.26 -10.11 -2.08 -0.8 -0.13 0.1 0.08 -0.35 -2.82 -1.09 -1.72 -1.29 - -2.07 -0.36 -2.88 2.65 - -1.74 -3.89 -2.25 -2.05 -2.56 -3.61 -4.53 -3.59 -1.52
AT5G37600 (GSR 1)
0.99 1.01 1.17 -0.16 -10.18 1.46 -2.39 -1.3 1.07 1.12 1.34 -3.78 -0.84 -1.1 1.17 -3.16 -2.65 -2.25 -0.34 -1.64 2.07 -0.33 -1.2 -1.89 -2.31 -1.22 -0.98 -2.55 -2.41 -8.32 -0.96 -0.82 -0.68 2.51 -7.3 -3.0 -1.52 -3.05 -0.9 1.72 -0.28 -1.41 -1.77 0.34
- - - - - - - - - - -1.95 - - -0.13 - - - - - - - 2.21 - - - 4.71 1.51 2.18 - - -2.41 - - 1.03 - -1.23 - - 1.04 - - - - -
-3.73 -0.59 -3.69 -4.24 - - -1.39 0.85 1.98 2.28 1.99 - - -1.56 -0.06 1.91 -0.49 -1.84 -3.53 -6.53 1.1 - -4.18 - -7.04 -5.09 0.62 -3.18 -5.71 - -3.69 - -4.56 - -6.39 -5.85 - - -3.65 -2.9 3.03 -1.08 3.13 -1.4
-1.53 4.55 1.94 -3.48 - -5.92 -1.39 -2.8 -2.11 -1.88 -1.66 - - -1.59 -3.15 -1.51 -1.89 -3.45 -2.71 -4.25 -1.59 - -6.21 - - -5.74 -5.63 -5.05 - - -5.0 -3.6 -7.12 - - -7.15 - - -7.43 1.32 0.68 -1.48 1.41 2.55
-2.41 1.5 -2.18 - - - 1.98 -1.01 -0.73 0.2 -0.18 - - -2.5 -1.61 -2.66 -4.15 -5.34 -4.15 - -1.57 - -2.04 - - - -5.58 - - - -5.65 - -6.27 - - -6.31 - - 0.67 -4.64 4.67 0.76 0.42 1.11
2.69 2.61 3.43 1.36 - 1.16 -3.91 -1.66 -2.34 -1.41 -0.78 - - -7.05 -6.95 -5.52 - -9.21 -7.05 - -8.06 -6.02 -6.57 - - -6.52 -7.26 -7.05 - - -7.53 - - - -5.3 -8.15 - - -6.22 -0.95 3.52 -3.02 -2.91 0.92
AT5G50200 (WR3)
3.08 1.87 -1.59 -0.24 - -1.93 -0.5 -0.2 0.55 0.34 1.28 -2.78 -0.31 -4.51 0.36 -0.11 -1.28 -3.92 -5.65 -4.23 -3.64 -2.85 -3.94 -8.08 -9.95 -6.29 -0.22 -3.23 0.07 - -5.17 -0.62 -4.97 -0.42 -5.12 -4.73 -3.0 -2.03 -1.96 2.02 2.92 0.29 -1.22 1.17
0.51 2.75 1.6 -6.42 -5.49 -1.82 -0.25 -0.5 0.65 0.64 -0.49 -2.9 -4.15 -1.59 -0.18 -5.09 -7.0 -6.84 -2.91 -2.63 0.64 -1.11 -0.38 0.43 0.84 -1.31 -2.78 -1.85 0.29 - -0.55 -2.52 -0.08 -0.23 -6.84 -1.6 -3.98 -2.55 -0.35 2.31 0.31 -1.76 -0.06 2.57
-2.65 2.68 -2.37 -6.0 - -9.6 -2.16 -1.68 -0.05 0.87 0.65 -1.29 -7.59 -1.98 -0.22 -8.57 -5.89 -6.66 -4.7 -4.02 2.32 -5.07 -2.51 -6.35 -5.54 -7.04 -3.66 -7.58 -8.9 - -1.2 -6.27 -1.51 -3.46 -3.82 -4.3 -11.21 -9.06 1.24 1.24 3.91 -2.97 -3.52 2.12

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.