Heatmap: Cluster_217 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Egg apparatus cell (small)
Egg apparatus cell (medium)
Egg apparatus cell (large)
Ovary
Uninuclear microspore
Generative cell
Pollen
Sperm
Pollen tube (bicellular)
Pollen tube (tricellular)
Flower (bud, female)
Flower (bud, male)
Flower (female)
Flower (male)
Flower (tepals)
Fruit (female)
Apical meristem
Shoot (female)
Shoot (male)
Leaf (male)
Leaves
Root (male)
AMTR_s00001p00150930 (evm_27.TU.AmTr_v1.0_scaffold00001.134)
- - - - - - - - - - - 4.3 - - - - -1.16 - - - - 0.89
AMTR_s00003p00132850 (evm_27.TU.AmTr_v1.0_scaffold00003.100)
-0.63 0.19 -2.06 -2.46 0.5 -7.62 -11.5 -8.7 -13.3 -13.97 -1.28 4.11 -2.16 -4.34 -1.3 -7.57 -11.72 -8.19 -8.05 - - -12.21
AMTR_s00010p00234230 (evm_27.TU.AmTr_v1.0_scaffold00010.275)
- - - - 0.63 - - - - - - 4.35 - - - - - - - - - -
AMTR_s00011p00254780 (evm_27.TU.AmTr_v1.0_scaffold00011.168)
- - - - - - - - - - - 4.36 - - - - - - - - - 0.6
AMTR_s00011p00254800 (evm_27.TU.AmTr_v1.0_scaffold00011.169)
- - - - 0.9 - - - - - - 4.15 - - - - - - - - - 1.22
AMTR_s00017p00065420 (evm_27.TU.AmTr_v1.0_scaffold00017.23)
- - - - 1.5 - - - - - - 4.26 - - - - - - - - - -
AMTR_s00018p00243790 (evm_27.TU.AmTr_v1.0_scaffold00018.152)
- - - - -3.21 - - - -5.73 - - 4.32 -3.28 -3.9 -2.59 - - - - - - 0.65
AMTR_s00019p00223930 (evm_27.TU.AmTr_v1.0_scaffold00019.286)
- - - - 1.17 - - - - - - 3.97 - - - - - - - - 2.03 -
AMTR_s00022p00224500 (evm_27.TU.AmTr_v1.0_scaffold00022.284)
- - - -10.28 0.22 - -11.92 - - -12.39 -3.55 4.37 - - -3.38 - - - - - - -
AMTR_s00024p00102840 (evm_27.TU.AmTr_v1.0_scaffold00024.51)
- - - -2.36 1.04 - - - -0.49 -1.74 - 3.87 -3.23 -2.3 0.94 - -0.92 - - - - 0.44
AMTR_s00025p00201810 (evm_27.TU.AmTr_v1.0_scaffold00025.256)
- - - - 1.95 - - - - - - 4.06 -2.12 - -0.84 - - - - - - -0.59
AMTR_s00030p00135000 (evm_27.TU.AmTr_v1.0_scaffold00030.82)
- - - - 0.04 - - - - - - 4.2 -0.16 -0.73 0.13 - - - - - - -
AMTR_s00034p00082500 (evm_27.TU.AmTr_v1.0_scaffold00034.24)
- - - - -0.1 - - - - - - 4.4 - - - - - - - - - -
AMTR_s00036p00197450 (evm_27.TU.AmTr_v1.0_scaffold00036.109)
- - - - 1.23 - - - - - - 4.3 - - - - - - - - - -
AMTR_s00036p00218060 (evm_27.TU.AmTr_v1.0_scaffold00036.149)
- - - - 0.63 - - - - - - 4.29 - -1.46 -0.79 - - - - - - -
AMTR_s00038p00074050 (evm_27.TU.AmTr_v1.0_scaffold00038.32)
- - - - 1.1 - -5.86 - - -6.66 0.2 3.89 -1.19 -0.06 -1.1 0.24 -2.11 - -3.72 -4.34 - -1.01
AMTR_s00038p00206590 (evm_27.TU.AmTr_v1.0_scaffold00038.158)
- - - - 1.14 - - - - - - 4.22 - -3.13 -0.74 - - - - - - -1.24
AMTR_s00040p00095760 (evm_27.TU.AmTr_v1.0_scaffold00040.58)
- - - - 1.94 - -3.44 - 1.24 -0.72 - 3.61 -0.65 -0.58 -0.03 - - - - - - -0.76
AMTR_s00041p00231650 (evm_27.TU.AmTr_v1.0_scaffold00041.274)
- - - - 0.65 - -0.37 - - -1.36 - 4.25 - - -2.45 - - - - - - -
AMTR_s00045p00158480 (evm_27.TU.AmTr_v1.0_scaffold00045.175)
- - - - 1.77 - -0.77 - -0.96 -0.31 -4.62 3.94 - -3.75 0.28 - -5.02 - - - - -
AMTR_s00052p00084020 (evm_27.TU.AmTr_v1.0_scaffold00052.21)
- - - - 0.13 - - - - -3.33 -0.1 4.26 - - -0.58 - - - - - - -
AMTR_s00053p00091280 (evm_27.TU.AmTr_v1.0_scaffold00053.48)
- - - - 0.65 - - - - - - 4.34 - - -3.13 - - - - - - -
AMTR_s00054p00164290 (evm_27.TU.AmTr_v1.0_scaffold00054.60)
- - - -7.46 1.73 - -8.94 -7.58 -6.83 -6.69 - 4.16 -9.89 -10.16 -0.28 - - - - -10.49 - -8.35
AMTR_s00057p00169510 (evm_27.TU.AmTr_v1.0_scaffold00057.176)
- - - - -0.02 - - - - - - 4.24 -2.53 - - -0.58 - -0.2 -1.18 - - -
AMTR_s00057p00202540 (evm_27.TU.AmTr_v1.0_scaffold00057.238)
- - - - -1.15 - - - -6.01 - - 4.07 -3.54 - -1.44 -1.05 -1.59 - -1.75 -1.25 - 1.48
AMTR_s00058p00139740 (evm_27.TU.AmTr_v1.0_scaffold00058.103)
- - - - 0.85 - -2.8 - -3.14 -1.88 - 4.26 - -3.23 -1.27 - - - - - - -
AMTR_s00064p00203880 (evm_27.TU.AmTr_v1.0_scaffold00064.104)
- - - -6.74 1.33 - -1.81 -5.85 -2.28 -1.89 - 4.18 -4.98 -3.44 -1.5 - - - -4.05 - - -
AMTR_s00065p00098360 (evm_27.TU.AmTr_v1.0_scaffold00065.53)
- - - - 1.48 - -10.39 -7.29 - -10.17 -0.36 3.66 -1.07 0.8 0.05 -5.24 -3.45 -4.29 -3.03 -1.13 -2.44 0.67
AMTR_s00073p00170300 (evm_27.TU.AmTr_v1.0_scaffold00073.49)
- - - - 0.25 - -0.92 - -2.61 -2.45 -2.57 4.17 - -0.41 -1.37 - -2.86 - - -1.15 - -
- - - - -0.26 - - - - - -0.93 4.14 -1.83 -4.91 -1.92 - - - - -3.11 - 1.2
AMTR_s00091p00036740 (evm_27.TU.AmTr_v1.0_scaffold00091.5)
- - - - 0.98 - 0.29 - 0.06 0.46 - 3.95 - -0.1 - - - - - - - -
AMTR_s00097p00144350 (evm_27.TU.AmTr_v1.0_scaffold00097.42)
- - - - 0.0 - - - - - - 4.38 -2.32 - - - - - - - - -
AMTR_s00104p00037440 (evm_27.TU.AmTr_v1.0_scaffold00104.3)
- - - - 0.96 - -1.69 - -1.48 -2.32 - 4.02 1.38 - -1.32 - - - - - - -
AMTR_s00106p00111260 (evm_27.TU.AmTr_v1.0_scaffold00106.82)
- - - - -0.04 - - - - - - 4.34 -0.29 - - - - - - - - -
AMTR_s00138p00067190 (evm_27.TU.AmTr_v1.0_scaffold00138.38)
- - - - - - - - - - - 4.15 - - - - - - - 0.32 - 1.61
AMTR_s00142p00074850 (evm_27.TU.AmTr_v1.0_scaffold00142.46)
- - - - 1.85 - - - -1.85 -1.86 - 4.12 -2.0 - -2.48 - - - - - - -
AMTR_s00142p00075140 (evm_27.TU.AmTr_v1.0_scaffold00142.47)
- - - - 0.54 - - - - - - 4.36 - - - - - - - - - -
AMTR_s00143p00013640 (evm_27.TU.AmTr_v1.0_scaffold00143.1)
- - - - 0.59 - - - - - - 4.36 - - - - - - - - - -
AMTR_s00147p00102150 (evm_27.TU.AmTr_v1.0_scaffold00147.58)
- - - - 1.49 - - - - - - 4.26 - - - - - - - - - -
AMTR_s00152p00086510 (evm_27.TU.AmTr_v1.0_scaffold00152.30)
- - - - -0.07 - - - - - - 4.28 -0.17 - - - - - - - - -0.5
AMTR_s00157p00022340 (evm_27.TU.AmTr_v1.0_scaffold00157.3)
- - - - -0.67 - -1.88 - - - - 4.26 - - - - - - - - - 0.91
AMTR_s00182p00053650 (evm_27.TU.AmTr_v1.0_scaffold00182.32)
- - - -6.97 -2.38 - -9.57 - -4.92 -7.28 -4.06 4.26 0.81 -6.75 -1.69 - -4.65 - -6.26 -4.56 - -1.24
AMTR_s00200p00018150 (evm_27.TU.AmTr_v1.0_scaffold00200.4)
- - - - 1.57 - - - - - - 4.25 - - - - - - - - - -
AMTR_s00239p00006910 (evm_27.TU.AmTr_v1.0_scaffold00239.1)
- - - - 2.22 - - - -2.22 - - 4.04 - -3.66 -0.73 - - - - - - -
AMTR_s01505p00005160 (evm_27.TU.AmTr_v1.0_scaffold01505.1)
- - - - -0.27 - - - - - - 4.4 - - - - - - - - - -
AMTR_s01576p00007880 (evm_27.TU.AmTr_v1.0_scaffold01576.1)
- - - - 1.33 - - - -1.78 - - 4.2 - -4.42 -0.46 - - - - - - -
- - - - 0.15 - - - - - - 4.38 - - - - - - - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.