Heatmap: Cluster_217 (HCCA)

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

Gene
Egg apparatus cell (small)
Egg apparatus cell (medium)
Egg apparatus cell (large)
Ovary
Uninuclear microspore
Generative cell
Pollen
Sperm
Pollen tube (bicellular)
Pollen tube (tricellular)
Flower (bud, female)
Flower (bud, male)
Flower (female)
Flower (male)
Flower (tepals)
Fruit (female)
Apical meristem
Shoot (female)
Shoot (male)
Leaf (male)
Leaves
Root (male)
AMTR_s00001p00150930 (evm_27.TU.AmTr_v1.0_scaffold00001.134)
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 5.75 0.0 0.0 0.0 0.0 0.13 0.0 0.0 0.0 0.0 0.54
AMTR_s00003p00132850 (evm_27.TU.AmTr_v1.0_scaffold00003.100)
43.79 77.18 16.3 12.34 96.13 0.35 0.02 0.16 0.01 0.0 27.94 1171.29 15.2 3.35 27.46 0.36 0.02 0.23 0.26 0.0 0.0 0.01
AMTR_s00010p00234230 (evm_27.TU.AmTr_v1.0_scaffold00010.275)
0.0 0.0 0.0 0.0 0.43 0.0 0.0 0.0 0.0 0.0 0.0 5.71 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00011p00254780 (evm_27.TU.AmTr_v1.0_scaffold00011.168)
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.67 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.05
AMTR_s00011p00254800 (evm_27.TU.AmTr_v1.0_scaffold00011.169)
0.0 0.0 0.0 0.0 0.05 0.0 0.0 0.0 0.0 0.0 0.0 0.5 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.06
AMTR_s00017p00065420 (evm_27.TU.AmTr_v1.0_scaffold00017.23)
0.0 0.0 0.0 0.0 0.17 0.0 0.0 0.0 0.0 0.0 0.0 1.15 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00018p00243790 (evm_27.TU.AmTr_v1.0_scaffold00018.152)
0.0 0.0 0.0 0.0 0.15 0.0 0.0 0.0 0.03 0.0 0.0 27.33 0.14 0.09 0.23 0.0 0.0 0.0 0.0 0.0 0.0 2.15
AMTR_s00019p00223930 (evm_27.TU.AmTr_v1.0_scaffold00019.286)
0.0 0.0 0.0 0.0 0.12 0.0 0.0 0.0 0.0 0.0 0.0 0.81 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.21 0.0
AMTR_s00022p00224500 (evm_27.TU.AmTr_v1.0_scaffold00022.284)
0.0 0.0 0.0 0.11 165.64 0.0 0.04 0.0 0.0 0.03 12.08 2929.17 0.0 0.0 13.66 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00024p00102840 (evm_27.TU.AmTr_v1.0_scaffold00024.51)
0.0 0.0 0.0 0.05 0.52 0.0 0.0 0.0 0.18 0.08 0.0 3.67 0.03 0.05 0.48 0.0 0.13 0.0 0.0 0.0 0.0 0.34
AMTR_s00025p00201810 (evm_27.TU.AmTr_v1.0_scaffold00025.256)
0.0 0.0 0.0 0.0 0.66 0.0 0.0 0.0 0.0 0.0 0.0 2.83 0.04 0.0 0.09 0.0 0.0 0.0 0.0 0.0 0.0 0.11
AMTR_s00030p00135000 (evm_27.TU.AmTr_v1.0_scaffold00030.82)
0.0 0.0 0.0 0.0 0.02 0.0 0.0 0.0 0.0 0.0 0.0 0.44 0.02 0.01 0.03 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00034p00082500 (evm_27.TU.AmTr_v1.0_scaffold00034.24)
0.0 0.0 0.0 0.0 0.04 0.0 0.0 0.0 0.0 0.0 0.0 1.01 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00036p00197450 (evm_27.TU.AmTr_v1.0_scaffold00036.109)
0.0 0.0 0.0 0.0 0.9 0.0 0.0 0.0 0.0 0.0 0.0 7.6 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00036p00218060 (evm_27.TU.AmTr_v1.0_scaffold00036.149)
0.0 0.0 0.0 0.0 0.04 0.0 0.0 0.0 0.0 0.0 0.0 0.44 0.0 0.01 0.01 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00038p00074050 (evm_27.TU.AmTr_v1.0_scaffold00038.32)
0.0 0.0 0.0 0.0 1.41 0.0 0.01 0.0 0.0 0.01 0.76 9.76 0.29 0.63 0.31 0.78 0.15 0.0 0.05 0.03 0.0 0.33
AMTR_s00038p00206590 (evm_27.TU.AmTr_v1.0_scaffold00038.158)
0.0 0.0 0.0 0.0 5.06 0.0 0.0 0.0 0.0 0.0 0.0 42.83 0.0 0.26 1.37 0.0 0.0 0.0 0.0 0.0 0.0 0.97
AMTR_s00040p00095760 (evm_27.TU.AmTr_v1.0_scaffold00040.58)
0.0 0.0 0.0 0.0 1.08 0.0 0.03 0.0 0.67 0.17 0.0 3.45 0.18 0.19 0.28 0.0 0.0 0.0 0.0 0.0 0.0 0.17
AMTR_s00041p00231650 (evm_27.TU.AmTr_v1.0_scaffold00041.274)
0.0 0.0 0.0 0.0 0.11 0.0 0.05 0.0 0.0 0.03 0.0 1.35 0.0 0.0 0.01 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00045p00158480 (evm_27.TU.AmTr_v1.0_scaffold00045.175)
0.0 0.0 0.0 0.0 3.59 0.0 0.61 0.0 0.54 0.85 0.04 16.07 0.0 0.08 1.27 0.0 0.03 0.0 0.0 0.0 0.0 0.0
AMTR_s00052p00084020 (evm_27.TU.AmTr_v1.0_scaffold00052.21)
0.0 0.0 0.0 0.0 0.14 0.0 0.0 0.0 0.0 0.01 0.12 2.38 0.0 0.0 0.08 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00053p00091280 (evm_27.TU.AmTr_v1.0_scaffold00053.48)
0.0 0.0 0.0 0.0 0.28 0.0 0.0 0.0 0.0 0.0 0.0 3.63 0.0 0.0 0.02 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00054p00164290 (evm_27.TU.AmTr_v1.0_scaffold00054.60)
0.0 0.0 0.0 0.5 294.21 0.0 0.18 0.46 0.78 0.86 0.0 1582.56 0.09 0.08 73.02 0.0 0.0 0.0 0.0 0.06 0.0 0.27
AMTR_s00057p00169510 (evm_27.TU.AmTr_v1.0_scaffold00057.176)
0.0 0.0 0.0 0.0 0.22 0.0 0.0 0.0 0.0 0.0 0.0 4.17 0.04 0.0 0.0 0.15 0.0 0.19 0.1 0.0 0.0 0.0
AMTR_s00057p00202540 (evm_27.TU.AmTr_v1.0_scaffold00057.238)
0.0 0.0 0.0 0.0 0.27 0.0 0.0 0.0 0.01 0.0 0.0 10.1 0.05 0.0 0.22 0.29 0.2 0.0 0.18 0.25 0.0 1.68
AMTR_s00058p00139740 (evm_27.TU.AmTr_v1.0_scaffold00058.103)
0.0 0.0 0.0 0.0 0.2 0.0 0.02 0.0 0.01 0.03 0.0 2.14 0.0 0.01 0.05 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00064p00203880 (evm_27.TU.AmTr_v1.0_scaffold00064.104)
0.0 0.0 0.0 0.02 4.26 0.0 0.48 0.03 0.35 0.46 0.0 30.72 0.05 0.16 0.6 0.0 0.0 0.0 0.1 0.0 0.0 0.0
AMTR_s00065p00098360 (evm_27.TU.AmTr_v1.0_scaffold00065.53)
0.0 0.0 0.0 0.0 45.08 0.0 0.01 0.1 0.0 0.01 12.62 204.26 7.68 28.2 16.77 0.43 1.48 0.83 1.97 7.39 2.97 25.64
AMTR_s00073p00170300 (evm_27.TU.AmTr_v1.0_scaffold00073.49)
0.0 0.0 0.0 0.0 0.97 0.0 0.43 0.0 0.13 0.15 0.14 14.61 0.0 0.61 0.31 0.0 0.11 0.0 0.0 0.37 0.0 0.0
0.0 0.0 0.0 0.0 0.21 0.0 0.0 0.0 0.0 0.0 0.13 4.4 0.07 0.01 0.07 0.0 0.0 0.0 0.0 0.03 0.0 0.57
AMTR_s00091p00036740 (evm_27.TU.AmTr_v1.0_scaffold00091.5)
0.0 0.0 0.0 0.0 0.3 0.0 0.18 0.0 0.16 0.21 0.0 2.32 0.0 0.14 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00097p00144350 (evm_27.TU.AmTr_v1.0_scaffold00097.42)
0.0 0.0 0.0 0.0 0.68 0.0 0.0 0.0 0.0 0.0 0.0 14.07 0.14 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00104p00037440 (evm_27.TU.AmTr_v1.0_scaffold00104.3)
0.0 0.0 0.0 0.0 0.27 0.0 0.04 0.0 0.05 0.03 0.0 2.25 0.36 0.0 0.06 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00106p00111260 (evm_27.TU.AmTr_v1.0_scaffold00106.82)
0.0 0.0 0.0 0.0 0.01 0.0 0.0 0.0 0.0 0.0 0.0 0.29 0.01 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00138p00067190 (evm_27.TU.AmTr_v1.0_scaffold00138.38)
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 1.19 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.08 0.0 0.2
AMTR_s00142p00074850 (evm_27.TU.AmTr_v1.0_scaffold00142.46)
0.0 0.0 0.0 0.0 0.08 0.0 0.0 0.0 0.01 0.01 0.0 0.36 0.01 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00142p00075140 (evm_27.TU.AmTr_v1.0_scaffold00142.47)
0.0 0.0 0.0 0.0 0.11 0.0 0.0 0.0 0.0 0.0 0.0 1.51 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00143p00013640 (evm_27.TU.AmTr_v1.0_scaffold00143.1)
0.0 0.0 0.0 0.0 0.08 0.0 0.0 0.0 0.0 0.0 0.0 1.07 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00147p00102150 (evm_27.TU.AmTr_v1.0_scaffold00147.58)
0.0 0.0 0.0 0.0 0.05 0.0 0.0 0.0 0.0 0.0 0.0 0.35 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00152p00086510 (evm_27.TU.AmTr_v1.0_scaffold00152.30)
0.0 0.0 0.0 0.0 0.04 0.0 0.0 0.0 0.0 0.0 0.0 0.87 0.04 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.03
AMTR_s00157p00022340 (evm_27.TU.AmTr_v1.0_scaffold00157.3)
0.0 0.0 0.0 0.0 0.04 0.0 0.02 0.0 0.0 0.0 0.0 1.25 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.12
AMTR_s00182p00053650 (evm_27.TU.AmTr_v1.0_scaffold00182.32)
0.0 0.0 0.0 0.04 1.07 0.0 0.01 0.0 0.18 0.04 0.34 106.71 9.8 0.05 1.73 0.0 0.22 0.0 0.07 0.24 0.0 2.36
AMTR_s00200p00018150 (evm_27.TU.AmTr_v1.0_scaffold00200.4)
0.0 0.0 0.0 0.0 0.14 0.0 0.0 0.0 0.0 0.0 0.0 0.92 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00239p00006910 (evm_27.TU.AmTr_v1.0_scaffold00239.1)
0.0 0.0 0.0 0.0 0.75 0.0 0.0 0.0 0.03 0.0 0.0 2.65 0.0 0.01 0.1 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s01505p00005160 (evm_27.TU.AmTr_v1.0_scaffold01505.1)
0.0 0.0 0.0 0.0 0.16 0.0 0.0 0.0 0.0 0.0 0.0 4.21 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s01576p00007880 (evm_27.TU.AmTr_v1.0_scaffold01576.1)
0.0 0.0 0.0 0.0 0.24 0.0 0.0 0.0 0.03 0.0 0.0 1.77 0.0 0.0 0.07 0.0 0.0 0.0 0.0 0.0 0.0 0.0
0.0 0.0 0.0 0.0 0.02 0.0 0.0 0.0 0.0 0.0 0.0 0.44 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)