Heatmap: Cluster_133 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Roots (apex), 7 DAG
Roots (differentation zone), 4 DAP
Roots (elongation zone), 4 DAP
Roots (meristematic zone), 4 DAP
Roots (stele cells), 7 DAS
Roots (tip)
Leaves (rosette), 21 DAG
Leaves (rosette), 29 DAG
Leaves (rosette), 35 DAG
Leaves (rosette), 42 DAG
Leaves (rosette), 57 DAG
Epidermis cells
Mature guard cells
Stems (internode)
Stems (internode), senescent
Meristem (M1-3), 7-9 DAG
Meristem (M4-6), 1-12 DAG
Meristem (M7-1), 13-16 DAG
Axis of the inflorescence
Pedicel
Flowers (receptacles)
Flowers (floral buds)
Flowers (sepals)
Flowers (petals)
Flowers (stamen filaments)
Flowers (anthers)
Flowers (carpels)
Flowers (ovules)
Stigmatic tissues
Pollen
Siliques
Siliques, senescent
Pods of Siliques
Pods of Siliques, senescent
Embryo
Endosperm
Seeds, dry
Seeds, from senescent siliques
Seeds, young
Seeds, germinating
Seedlings, 5 DAG
Seedlings, 11 DAG
Seedlings, 14 DAG
Seedlings, etiolated
AT1G06310 (ACX6)
2.55 -4.69 -1.13 3.65 - 2.59 - - - - - -5.48 - - - -0.52 0.34 0.82 -3.55 -2.99 -2.93 -2.54 -5.57 - - -1.93 0.51 1.4 - - -1.1 -5.65 -1.87 - 2.65 -0.81 - -6.13 0.49 -0.34 -3.31 -3.58 -1.43 -3.29
AT1G07290 (GONST2)
2.06 -0.59 1.63 3.27 -5.56 2.3 -1.62 -1.0 -0.17 -0.24 -0.21 -6.66 - -0.68 -0.96 -1.63 -0.86 -0.09 -0.84 -1.03 -0.02 -0.77 -1.26 -0.3 -1.5 -1.21 -0.09 -0.66 -0.1 -1.35 -0.52 -3.18 -0.88 -3.35 -0.02 0.04 -3.52 -7.31 -0.63 0.68 -1.64 -2.44 -0.88 -0.46
AT1G13620 (RGF2)
1.72 -2.75 -3.72 4.67 - 3.22 - - - - - -3.54 - - - - - - - - - - - - - -6.73 - - - - -3.48 -3.71 -4.44 - 1.07 0.75 - - - -0.19 -5.23 - -0.82 -3.55
1.15 -0.82 3.65 3.27 - 3.85 -6.39 - -6.38 -5.19 -5.51 - -6.55 -6.92 -6.84 - - - -6.94 -6.39 -5.7 -2.74 -5.54 -3.92 -3.03 -6.03 -5.78 -3.62 -6.0 - -2.09 -3.47 -3.87 -3.25 -0.02 -3.69 - - -4.66 0.76 -3.51 - -1.82 -1.81
0.97 - - 4.18 - 3.02 - -2.26 -3.71 -4.54 -3.9 -0.89 - -5.44 -1.94 - -5.86 -7.73 - -5.42 -6.64 0.68 0.09 2.87 -2.75 -4.97 -4.92 - - - -2.67 - -5.89 -5.35 0.08 -4.84 - -2.19 -5.8 0.13 0.35 - -1.45 -2.72
2.22 -2.1 0.92 2.98 -8.31 2.96 -0.77 -8.84 -8.32 -10.21 -9.61 -9.27 - -4.07 -5.85 0.75 0.65 0.92 -0.57 -1.85 -1.35 -1.13 -2.58 -1.77 -2.03 -0.16 -0.55 0.5 -4.01 -7.36 -0.3 -4.99 -1.82 -7.17 0.78 0.49 -6.8 -4.45 0.99 0.78 -1.69 0.09 -0.78 -2.38
AT1G26870 (FEZ)
1.63 -4.09 - 3.67 2.84 2.84 - - - - - - - -3.36 -5.12 -4.99 -2.01 -3.59 - - - - - - - - - - - - -1.98 - -5.41 - 3.14 1.44 -5.43 - - -0.05 -4.75 - -1.41 -3.0
2.74 -0.64 2.97 3.66 1.09 2.94 -3.85 -3.58 -3.47 -4.82 -4.64 -3.8 -6.1 -5.67 -4.71 -5.93 -6.91 -5.2 -3.25 -3.17 -3.04 -4.0 -3.63 -5.14 -6.83 -6.67 -3.18 -3.36 -4.8 -8.33 -3.57 -5.03 -3.74 - 0.61 -1.81 -5.26 -5.3 -4.29 0.42 -1.38 -3.25 -0.72 -0.92
3.39 -0.72 2.69 2.45 - 4.11 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.76 -3.97 - -1.84 -
2.64 -2.68 1.4 4.33 - 2.93 - - - - - - - - - - -6.64 - - - - -7.22 - - - -7.6 -4.7 - - - -3.66 -6.02 -4.84 - 1.16 -4.27 -8.72 -8.91 - 1.64 -1.84 -6.26 -0.12 -1.22
2.54 -4.62 -1.18 4.44 - 3.81 - - - - - - - - -10.98 - - -12.41 - - - - - - - -11.6 -12.8 -11.08 - - -5.83 -10.17 -9.81 -10.1 -5.97 -6.2 - -9.71 -13.46 -1.46 -1.62 - -1.12 -0.38
AT1G53708 (RTFL9)
2.38 -4.18 -3.56 4.52 - 3.55 - -7.12 - - - - - - - -6.08 - - - - -6.06 - - -5.11 - - -7.57 - - - -4.75 - -5.09 - -3.89 -4.57 - - -6.47 1.01 -2.41 -4.06 -0.5 -0.65
AT1G61580 (ARP2)
0.89 -1.02 1.07 2.49 -0.31 2.62 0.47 -2.86 -2.28 -2.06 -2.51 -3.21 - -1.29 -1.11 0.07 0.36 0.38 0.01 -0.6 -0.26 0.02 -1.11 -0.9 -0.8 -0.82 -0.11 0.65 -0.65 -10.26 -0.65 -2.96 -1.18 0.34 0.98 -0.61 -3.84 -4.42 0.64 0.42 -0.08 0.34 -0.98 -0.68
AT1G64220 (TOM7-2)
1.84 -2.56 -1.34 2.05 - 2.8 0.26 -1.14 -3.04 -4.07 -4.28 - - -0.43 -2.68 0.71 -0.18 0.07 1.11 0.26 -1.16 -1.4 -1.78 -1.05 -0.33 0.32 -0.56 -0.62 -1.53 -5.87 -1.14 -0.67 -2.42 -6.01 -0.15 1.43 -5.87 -0.49 -0.59 2.51 -1.55 -0.82 -1.05 -1.44
AT1G74500 (BS1)
2.17 -0.72 3.47 3.58 - 3.6 - - - - - - - - - - -10.72 - -8.64 - - - -9.71 - - -10.28 -7.67 - - - -6.0 -4.61 -6.92 - -1.49 -8.15 -5.27 -4.79 - 1.09 -3.02 -7.71 -0.96 -1.19
AT1G79580 (SMB)
2.31 -3.23 -3.59 4.29 - 3.42 -6.56 - - - - - - -6.09 - - - - - - - - - - - - - - - - -2.75 -3.95 -3.63 - 1.82 -2.33 - -3.76 - 1.13 -0.73 - -0.15 -0.4
2.43 -1.93 1.29 4.5 - 3.4 - - - - -9.86 - - - - - -9.22 -7.98 - - - - - - - - -9.19 - -6.74 - -9.86 -8.35 -8.7 - -2.94 -9.31 -7.74 -7.83 - 0.44 -1.44 - -1.03 -1.5
AT2G14820 (NPY2)
3.17 0.13 2.87 3.5 1.6 3.08 - - - - - -5.29 - -5.51 - -4.49 -2.79 -2.65 -5.48 -5.64 -5.31 -6.07 - - - -8.68 -7.85 - - - -7.19 -7.19 -7.14 -7.01 -2.42 -2.29 - - - 1.01 -2.32 - -1.58 -1.7
2.88 -3.15 1.2 4.07 - 3.54 - - - - - - - -1.64 - -5.72 - -8.5 - - - - - - - - - - - - -2.95 - -4.8 - 1.11 -3.17 -6.82 - - 1.21 -3.23 - -1.79 -1.64
3.47 -0.69 2.08 3.63 - 3.37 - - - - - -5.45 - - - -6.24 -6.81 -8.35 - - - - -10.32 - - - - - - - -4.19 -2.52 -5.74 -9.23 -0.7 -8.03 -5.06 -2.72 - 1.31 -1.64 -6.01 -0.29 -0.69
-0.09 -1.49 0.09 2.28 - 2.77 -3.7 -4.05 -3.38 -3.18 -3.75 -0.7 1.85 -2.93 -3.49 -2.24 -2.73 -1.96 -2.04 -3.97 -1.01 -1.33 -4.16 -3.65 -4.87 1.61 0.74 1.74 -0.06 -5.45 0.33 -3.65 -0.8 - 1.8 2.04 -2.3 -3.6 1.34 0.18 -6.55 - -1.88 -1.67
2.64 -3.34 0.15 3.95 - 3.99 - - -8.73 - - - - -5.8 -6.96 -1.99 -0.52 -0.62 -5.8 - - - - -6.87 - -2.43 -7.02 - - -4.09 -8.57 - -8.84 - -0.86 -2.45 - - -5.45 0.44 -2.17 - -0.52 -2.11
2.16 -3.97 -0.17 3.26 - 3.2 - - - - - - - - -6.75 0.63 -0.01 -1.18 -4.01 - -1.24 -3.23 - - - - 0.31 -1.17 -6.11 - 0.78 - -0.79 - 2.58 -1.76 - - 1.47 0.85 -2.05 -0.77 -1.17 -3.49
AT3G14550 (GGPS3)
1.39 -2.06 -0.11 2.68 -5.75 3.02 -2.33 -2.44 -1.7 -2.07 -1.95 - - -1.76 -1.0 0.79 -0.36 -1.35 -1.15 -3.25 -0.14 -1.65 -4.21 -2.47 -2.78 -2.87 0.31 0.35 -4.67 -4.47 1.84 -3.79 0.93 -4.37 1.35 -2.62 -1.62 -2.71 1.52 1.06 -1.06 -0.3 -1.0 -1.63
2.16 -1.36 0.1 3.71 -7.66 3.35 -1.57 -7.2 -6.89 -6.48 -6.79 -5.3 - -5.59 -3.44 -1.81 -1.74 -2.49 -2.34 -2.21 -3.48 -1.37 -3.34 -2.32 -2.64 -0.82 -2.71 -1.42 -2.72 - -2.84 -0.31 -4.33 -6.22 -1.18 -2.51 1.08 0.46 -1.48 2.1 -1.82 -1.26 -2.12 -2.2
AT3G20110 (CYP705A20)
2.18 2.2 3.13 -0.35 - 3.87 - - -4.8 -3.74 -2.16 - - - -5.95 -4.48 -5.4 -5.95 - - -7.5 -5.02 - - - - -4.91 -6.05 - - -7.21 - -7.11 - - -4.04 - - - 3.01 -2.03 -2.25 -1.5 0.34
AT3G20140 (CYP705A23)
1.14 -0.18 0.66 4.08 - 2.82 -4.51 - - -5.49 - - - - -0.81 -2.98 -5.66 -5.36 - - -1.82 -0.71 - -2.54 -4.54 -1.82 -3.09 -3.06 - -1.13 -1.43 1.24 -3.81 -4.21 -3.9 0.7 2.06 0.93 -3.11 -0.12 - -1.48 -1.31 -4.37
2.8 -0.27 3.76 2.62 - 3.43 - - -9.04 - - - - - - -8.27 -9.62 -8.83 - -8.87 -5.91 -4.05 -3.42 -2.93 -3.23 -7.91 -10.1 - -8.15 - -6.09 -4.55 -8.33 - -2.85 -4.41 - - -11.44 1.86 -2.57 - -0.99 -0.44
AT3G30350 (RGF4)
1.82 -1.94 0.25 4.67 - 2.86 - - - - - - - -5.61 -3.01 -5.49 -4.55 -4.75 -5.62 -6.6 -4.33 -5.59 - - - - -6.35 -6.62 -6.68 - -3.62 -1.7 -4.75 - 0.8 -3.31 -6.09 -1.93 -6.27 0.62 -1.45 -4.04 0.08 -1.5
AT3G47710 (BNQ3)
3.63 -0.93 2.48 1.45 - 4.34 - - - - - - - - - - - -2.8 -3.74 - - - - - - - -7.79 - - - - - - - - - - - - -1.16 -4.92 - 0.7 -2.65
AT3G60870 (AHL18)
1.35 -4.63 -0.37 4.02 2.13 2.7 - - - - - - - - - -1.92 -3.07 -4.5 -4.47 - - -4.47 - - - -4.09 -2.53 -2.5 - -5.35 -2.65 -3.62 -4.22 - 2.6 -1.74 - - -2.98 2.15 -1.61 - -1.24 -0.72
0.21 -0.59 -0.27 2.5 - 3.28 -3.29 - -7.72 -5.29 -7.38 0.28 - -3.78 -3.63 0.73 0.08 -0.23 1.58 -0.41 -1.02 -1.44 -2.3 -0.89 -1.58 -1.38 -0.96 -0.3 -5.85 - -3.73 -4.94 -4.67 -1.62 2.63 0.98 - -6.35 -0.34 0.18 0.7 -0.41 -1.52 -2.34
1.49 -1.57 1.69 3.59 - 2.89 - - - - - - - - - -2.23 -0.87 -0.9 -1.41 -1.42 - -0.41 -2.6 -1.57 - 1.86 -1.42 0.26 - 1.86 -4.1 - -4.48 - 0.89 -1.33 - -3.0 -2.8 0.74 -0.69 -0.45 -1.7 -4.29
2.77 -1.84 1.68 4.54 - 2.86 -6.23 - - - - - - - - - -10.02 - - - - - -5.05 - - -6.75 - - - - - - - - - - - - - 0.25 -1.53 - -1.22 0.24
AT4G27950 (CRF4)
1.33 -1.8 0.84 3.32 -5.85 2.97 -1.38 -1.86 -3.74 -4.65 -5.53 -0.73 -1.86 0.01 -3.26 0.64 0.17 -0.6 0.42 0.36 -0.76 -1.05 -2.83 -3.57 -2.51 -0.79 -0.24 -1.1 -1.84 -3.01 -1.85 0.15 -2.43 -1.78 0.54 -0.57 -2.75 -1.73 -1.71 0.68 -0.63 -0.49 0.09 -2.03
2.83 2.6 1.4 3.46 -7.4 3.4 -5.44 - - -9.07 - -8.5 - -4.45 -6.19 -1.67 -2.48 -3.09 - - -6.54 -2.72 -8.96 - -7.24 -5.22 -2.71 -0.63 -7.01 - -8.06 -6.94 -8.28 -6.78 -7.1 -8.23 -9.06 -6.85 -2.32 0.79 -1.8 -4.27 -0.88 1.06
1.07 -4.56 0.64 3.6 - 2.64 - - - - - - - -3.21 - -2.99 -2.22 -1.12 -2.81 -4.29 -4.4 1.04 1.67 1.9 1.57 -3.51 -2.48 -4.43 -2.53 - -1.63 0.6 -1.96 -2.52 -0.26 -6.47 0.82 0.32 -4.93 0.22 -4.41 -2.86 -0.73 -2.36
AT5G14750 (WER)
2.69 -1.91 1.86 3.79 - 3.1 - - - - - -6.76 - -4.84 -2.33 -1.42 -0.89 -2.08 -8.37 - -3.65 -2.08 -9.39 - -8.91 -8.06 -2.99 -6.1 -6.9 - -2.07 -3.42 -4.1 -8.58 1.25 -2.15 -8.9 -9.09 -7.97 2.14 -1.74 -1.88 -1.06 -0.16
3.03 -2.45 -0.48 4.08 - 3.9 - - - - - - - -3.31 - - - - - - - - - - - - - - - - - - - - -3.16 - -4.79 - - 0.86 -5.12 - -0.06 -
1.97 -3.66 -0.92 2.14 1.87 3.22 -4.4 -7.6 -3.16 -3.27 -1.46 1.15 0.23 -0.24 0.55 - -3.12 -1.44 -4.53 -5.97 -4.08 - -5.03 -3.29 -6.01 0.44 -1.86 -4.54 - -2.85 -0.56 -4.16 -1.47 -2.4 2.72 1.01 -2.54 -4.14 -5.3 0.9 -2.29 - -0.93 -1.03
AT5G19520 (MSL9)
2.62 -1.63 1.49 4.12 - 2.91 - - - - - -4.05 - -7.48 -8.51 -1.77 -1.56 -2.05 -7.9 -9.47 -10.92 -5.28 -9.56 -8.61 - -10.3 -3.57 -7.9 -1.91 - -5.35 -3.34 -6.36 -7.26 0.12 -3.99 - -3.02 -9.26 2.4 -1.97 -4.59 -0.83 -0.14
1.67 1.69 1.72 2.57 -5.99 2.95 -4.09 -2.34 0.43 1.31 1.35 -5.03 -3.7 -7.17 0.42 -3.85 -3.34 -2.96 -4.51 -7.16 -8.49 -7.15 -5.52 - - -4.45 -8.38 - - -6.77 -6.95 -3.94 -7.63 -9.33 -6.02 -5.76 -6.84 -3.43 - 2.98 -0.05 -2.54 -1.04 1.24
AT5G37800 (RSL1)
3.08 0.32 3.23 2.52 - 3.55 - - - - - - - -2.74 - - -4.61 -4.76 -5.02 - -6.84 -3.05 - - - 0.92 -4.67 - - 1.44 -7.16 - - -4.99 -3.33 - - - -7.39 0.3 -2.29 -4.09 -1.33 -1.46
AT5G39820 (NAC094)
2.15 - -2.73 4.1 - 3.4 - - - - - - - - - - - - - - - - -5.11 - - - - - - - -3.05 - -3.99 - 2.28 2.07 - - -5.04 0.88 -2.75 -2.96 -1.75 -4.05
AT5G41315 (GL3)
2.43 0.19 1.65 2.78 - 3.08 0.22 - -6.29 -4.83 -6.12 - - -3.23 -3.07 0.58 -0.76 -1.24 0.15 -2.25 -3.69 -3.43 -3.69 - - -6.17 -3.29 - -2.17 - -1.18 -2.33 -2.05 -0.04 2.62 -5.07 -2.81 -2.57 -4.99 1.24 -1.71 -0.01 -0.39 -1.45
0.83 -2.01 2.1 4.02 - 4.07 -2.93 - - - - - - - - - -2.59 -3.79 -2.82 - -4.16 -3.44 -3.13 -1.46 -2.49 -2.6 -3.58 -4.46 - - -3.86 - - - -2.31 - -4.94 - -4.58 0.54 -2.2 -3.48 -0.02 -4.16
1.1 - - 4.63 - 3.42 - - - - - - - - - - - - - - - - - - - - - - - - -3.12 - - - 1.95 -1.23 - - - 0.17 - - -0.5 -2.51
2.98 -4.73 -4.11 4.0 - 3.93 -2.79 -3.82 -2.6 -1.13 -1.6 - -5.21 -4.02 -4.63 - - -7.97 - -4.8 -7.37 -1.99 -1.63 - - -3.45 - - -3.76 - -4.32 - -4.86 -2.33 - - - - - -0.58 -1.89 -1.81 0.07 -2.18
AT5G52170 (HDG7)
2.24 -1.25 0.42 3.19 3.54 2.7 -5.3 -3.12 -3.2 -3.12 -2.92 -1.12 -2.62 -2.49 -2.08 -1.06 -1.98 -1.25 -1.48 -2.33 -2.93 -4.79 -3.63 -2.47 -3.48 -2.66 -0.59 -2.5 -2.98 - -2.15 - -2.45 -4.3 0.81 -0.51 -2.12 -2.64 -1.99 -0.76 -2.14 -2.51 -0.83 -2.24
AT5G56320 (EXP14)
3.63 0.78 2.4 3.0 - 3.15 -3.31 -5.53 -7.17 -11.01 -9.39 - - -1.29 -7.81 -2.11 -1.29 -1.92 -2.26 -2.69 -3.83 -3.44 -1.16 -0.9 -2.16 -4.47 -2.99 -3.06 -1.2 - -3.15 - -4.15 -6.84 -2.34 -4.11 - -9.88 -2.85 0.01 -0.85 -3.33 -0.33 -0.3
AT5G57090 (AGR)
2.94 0.07 2.79 3.54 - 3.11 - -6.24 -11.45 - - -6.11 - -5.19 - -3.63 -4.92 -4.48 -8.46 -7.53 - -4.68 -4.19 -0.44 -0.68 -7.18 -7.07 - -6.82 - -6.31 -2.46 -7.15 -9.43 -4.83 -9.53 -4.18 -4.22 -10.33 1.95 -0.99 -6.94 -1.6 0.37
AT5G57980 (RPB5C)
2.76 -2.18 0.67 3.56 -6.19 3.66 -4.3 -6.66 -7.53 -9.06 -9.03 -1.49 -6.98 -3.37 -1.88 -1.89 -1.77 -2.06 -1.61 -3.26 -4.16 -1.65 -4.65 -1.69 -3.0 0.05 -2.3 -1.88 -4.61 -7.3 -3.77 -4.71 -4.9 - -1.49 -0.52 -4.53 -4.05 -1.78 1.89 -2.73 -2.8 -1.05 -1.31
2.63 -1.75 -0.1 2.62 - 2.78 -0.64 -5.28 -7.31 -7.85 -7.23 -6.44 - 0.12 -2.42 0.36 0.34 0.01 0.25 -0.87 -1.52 -1.39 -1.94 -1.43 -0.87 1.9 -0.93 -0.72 -1.73 -7.0 -0.93 -5.08 -2.31 -2.0 -1.36 1.9 -8.59 -4.85 -0.49 0.86 -0.82 -1.15 -2.02 -1.89
AT5G60810 (RGF1)
1.35 - -3.68 4.91 - 2.45 - - - - - - - -3.53 - - - - - -3.53 - - - - - - -5.65 - - - -1.89 -3.77 -4.58 - 0.57 -2.07 - - - 1.26 -4.56 - 0.01 -2.77

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.