Heatmap: Cluster_76 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule
Ovule, mature
Ovule, pollinated
Strobilus, female
Ovulate strobilus
Microstrobilus
Kernel
Leaf
Leaf, female
Leaf, male
Leaf, salicylic acid
Leaf, seedling
Leaf, truncation control
Leaf, truncation treatment
Leaf, water
Yellow-green stripe leaves
Green leaves
Stem
Cambium
Root
0.83 - - - 0.3 - -0.41 -2.05 -0.0 - 2.17 - - - 1.06 3.0 - - -1.23 -
0.7 - - - - - - -1.21 1.69 - - - - 0.17 - - - - 3.76 -
- - - - - - - 4.29 - - - - - - - - - - -1.16 -
-0.19 -1.1 0.98 -0.71 0.28 -2.18 -0.87 -0.94 1.79 0.96 -0.69 -0.22 -2.1 -1.49 -2.01 1.63 0.61 -0.14 -4.07 -1.91
0.74 0.54 1.2 -1.38 -1.97 -3.67 -2.1 -0.44 -2.34 -1.72 2.35 0.47 -0.54 -1.53 1.03 -1.22 -1.18 -4.54 -2.13 0.74
2.43 - - - - - 2.69 2.25 - - 1.76 - - - - - - - - -
- - - - - - - 0.13 - - 4.24 - - - - - - - - -
- - - - - - - - - - - - - - - - - - 4.32 -
1.23 - - - -0.04 - 1.16 -0.96 1.66 0.56 - -9.82 - - - - - 1.32 - 2.77
- - - - - - - -0.97 - - 2.49 - 1.2 2.73 2.31 - - - - -
0.35 - 0.7 1.04 0.76 -0.13 -3.44 -0.23 1.27 0.59 -0.96 -0.81 -0.31 -1.75 -7.76 0.7 0.31 -0.29 -2.43 0.61
- - - - - - - 4.32 - - - - - - - - - - - -
- - - - - - - 1.0 - 0.47 1.18 - - - - 1.98 3.12 - 0.77 -
-0.36 -0.68 -0.17 -2.14 1.08 -0.61 0.81 0.04 -0.67 0.15 0.0 0.3 0.96 0.61 0.25 -1.82 -0.34 -0.1 -0.09 -1.46
-0.86 1.29 0.81 - - -0.68 1.06 0.41 -0.24 -0.65 - -2.83 1.27 1.02 - 0.63 -0.38 0.62 0.38 -
-3.18 -0.27 -0.96 -3.54 -1.57 -0.86 -2.64 -0.18 -2.82 -1.76 2.77 -1.01 -0.33 -1.45 2.32 -0.68 -3.16 -1.64 -0.75 -0.01
3.77 - - - - - - 2.67 - - - - - - - - - - - -
0.72 - - - 0.43 - - -2.49 - - 1.2 - - - 1.04 3.14 0.38 0.22 0.29 -
- - - - - - - 4.32 - - -9.02 - - - -21.23 - - - -4.97 -
2.97 - - - - - - 0.15 1.45 - - - - - - - - - 3.06 -
- - - - - - - - - - - - - - - - - - 4.32 -
- - - - - - - -0.73 - - 4.28 - - - - - - - - -
-0.22 - 1.89 - - - - 1.02 - - 2.28 - 1.81 - - 1.44 1.24 - - -
0.47 - - - - - - -0.42 - - 3.39 - 1.07 -0.07 - 2.13 - - - -
-0.06 0.49 -1.68 - -1.67 0.2 -3.37 0.1 -1.4 -0.17 -1.57 -0.94 1.08 0.96 -1.9 1.57 0.76 0.72 -1.61 0.69
- - - 3.28 - - -0.27 0.31 -1.0 0.77 - - - - - - - 1.53 1.64 -
1.54 - - - - - - -0.6 -0.28 - -0.2 -2.07 0.69 -1.6 0.71 2.41 0.4 -0.28 0.93 0.63
-0.57 - - - - - -1.84 0.95 -1.21 0.29 -0.29 -3.19 -0.58 -0.72 2.43 - - - 2.31 1.56
- - - - - - - 0.85 - - 4.19 - - - - - - - - -
0.36 - -0.67 - - - -0.58 -0.26 1.35 2.9 - - - -0.82 - 0.0 -1.31 -0.58 -0.92 1.78
- - - - - - 0.18 -0.63 0.44 0.29 3.3 - 1.7 - 0.85 - - - -0.44 -
- - - - - - - - - 4.32 - - - - - - - - - -
- - - - - - - 2.14 - - - - 3.96 - - - - - - -
- - - - - - - - - - 3.46 - - - - - - - - 3.17
- - - - - - - - - - - - - - - - - - 4.32 -
- - - - - - - - - - 4.32 - - - - - - - - -
0.6 - 1.71 - - - 1.83 -1.18 0.58 - - - -0.61 - 0.37 - - 2.96 - -
-0.91 3.89 -3.08 -2.6 -0.93 -3.29 -8.46 -7.12 -6.21 -5.53 -11.91 -9.27 -6.06 -5.17 -9.35 -9.71 -11.37 -6.58 1.64 -0.95
- - - - - - - - - - 3.56 - - 0.19 2.58 - - - 0.1 -
-4.41 -7.61 -4.16 -4.07 -5.88 -5.92 -7.3 -0.04 1.03 1.29 2.05 0.2 1.07 0.89 1.69 -1.38 -0.38 -3.55 -6.12 -0.67
- - - - - - - -0.42 -2.71 -2.43 3.39 1.34 - 0.09 1.98 - - - -0.16 -
-2.05 -1.5 -0.63 -1.96 -2.57 -3.33 -3.52 0.2 1.35 0.24 1.89 -0.7 -1.03 -1.13 1.3 0.89 1.28 -1.42 -0.24 -3.96
- - - - - - - - - - - - - - - - - - 4.32 -
-3.18 -0.27 -0.96 -3.54 -1.57 -0.86 -2.64 -0.18 -2.82 -1.76 2.77 -1.01 -0.33 -1.45 2.32 -0.68 -3.16 -1.64 -0.75 -0.01
0.99 - 1.95 - - - - -2.02 0.26 - 2.91 - 2.37 - - - - - - -
1.82 - 0.21 2.91 - - - 0.43 0.84 -0.6 0.11 - - - - 0.5 - - 0.58 -
- - - - - - - 0.78 - - - - - - - - - - 4.19 -
- -0.65 -0.67 - - - -0.97 -0.41 0.88 -0.03 2.53 -1.45 -0.98 -0.89 1.83 -0.12 0.71 -1.86 -0.3 -1.9
- - - - - - - - - - - - - - - - - - - -
0.71 0.93 0.47 - 0.39 -1.55 -0.63 -0.8 1.23 1.13 - -0.32 - -2.14 - 1.14 0.89 -0.1 -1.73 0.42
1.48 - - 0.32 0.43 - -1.11 -0.76 -1.28 -1.04 0.57 -3.17 - -2.78 -1.57 2.54 -0.88 -1.43 1.65 -0.47
1.09 2.25 0.23 - 1.24 - - -0.47 -1.52 -0.77 - -1.72 - - 1.0 - 0.58 1.9 -1.39 -
-0.13 - - - - 2.1 - -0.5 -0.83 - - - 1.71 -0.74 - 2.28 - - - 2.26
- - 1.62 - - - 0.26 -1.26 1.65 -0.27 -0.62 -0.9 - 0.82 -0.61 - - - 2.95 -
-5.19 - -4.2 1.2 -3.04 -1.86 3.47 -0.74 -2.04 -1.31 -2.23 -3.0 -3.17 -4.08 -3.35 - -4.09 -1.97 1.93 -2.91
- - - - - - - - 1.03 0.99 3.68 - - - 1.64 - - - - -
0.94 - -0.32 - - 1.56 3.24 -5.71 - - - - - -0.14 - - - - 1.72 -0.55
- - - - - - - 0.05 - 4.25 - - - - - - - - - -
2.76 - - - - - - -0.77 -0.29 2.63 - -1.76 -1.37 -0.48 - - - - 2.08 -
0.84 - - -0.42 - -2.4 1.0 -0.36 1.06 2.43 -0.22 - -0.25 -0.18 0.72 -2.23 -0.99 -0.98 -1.45 0.29
-7.32 -6.59 -1.26 -4.62 -5.53 - - -9.32 - - - - - - - - - -8.13 4.02 1.73
- - - - - - - 0.8 - 4.19 - - - - - - - - - -
-3.84 - - - 1.63 1.61 - -2.14 1.27 - 3.39 -0.62 - - - - - - - -
-1.34 - -0.97 1.74 -1.87 -1.63 -1.1 -1.12 -2.13 - 2.3 -1.92 1.29 -0.3 0.66 0.74 -0.47 -2.01 0.39 -
0.57 0.52 - - 0.27 - -0.81 0.36 0.28 0.25 0.77 0.53 0.49 -0.18 0.88 0.14 0.19 -0.21 -0.83 -0.58
- - - - - - - 0.69 0.8 - 1.33 - -0.02 - - - - 2.21 2.68 1.08
0.33 1.46 - 2.0 - - 1.27 -0.54 0.56 - 0.28 - -1.09 - - 2.0 0.41 - -1.31 -
0.33 - - 0.43 0.83 - 1.77 0.43 -1.48 -2.09 - -0.19 1.77 0.91 - -0.99 0.56 -0.39 -0.55 -0.55
- - - - - - - - - - - - - - - 3.63 - - 2.93 -
- - - 2.86 - - - -0.8 - - 2.69 - - - 0.97 1.39 - - 0.19 -
1.92 - 1.9 - 0.83 - - 0.34 - - - - -0.34 - - 1.52 - - 2.53 -
- - - - - - - 0.52 - - 3.95 - 1.65 - - - - - - -
1.33 - - - - - - 0.43 0.57 - 0.65 - 1.37 - - 2.86 - - -0.72 1.4
0.66 -0.75 -3.68 -1.39 -0.52 -0.29 -0.84 0.34 -0.26 0.27 1.73 -0.3 -0.2 0.23 1.53 -2.43 -5.5 0.89 -2.14 -0.63
0.79 0.91 0.78 1.18 0.18 -3.67 -0.95 -1.48 1.4 1.01 - -0.89 -2.65 -2.57 - 1.05 -1.13 0.74 -3.11 -1.05
- - - - - - - - - - - - - - - - - - 4.32 -
- - - - - - - - 2.07 - - - 2.6 - - - - - 3.28 -
- - - - - - - - - - - - - - - - - - - -
- - - - - - - 1.09 -0.7 -19.93 -9.45 1.57 -19.38 - - - - 3.59 0.38 -0.07
- - - - - - - -3.55 - - 3.48 - - 1.31 - - - - 2.65 -
2.74 - - - - - - 0.69 0.02 0.9 1.69 - 1.63 1.32 - - - - - -
- - - - - - - - - - - - - - - - - - 4.32 -
- - - - - - - - - - - - - - - - - - - -
-0.84 - - 0.79 -0.75 - - 0.67 1.3 -1.72 2.75 -0.87 - -0.75 1.28 - - - 1.31 -
0.85 0.18 -0.99 - 0.1 - 1.54 -0.46 0.16 -0.8 -1.09 -1.85 - - 1.44 -0.7 - 0.43 1.76 0.44
- - - - - - - -0.82 - - 3.26 1.5 - 1.91 - - - - 1.7 -
- - - -3.49 -2.13 - -5.52 -1.8 0.88 0.87 -6.99 -2.34 -0.27 3.1 -7.23 -1.87 -2.43 -0.08 2.23 -6.04
-7.09 -5.72 -6.03 -4.59 -0.29 -6.2 -3.41 -1.4 1.1 1.99 -5.4 -0.85 -0.49 1.8 -4.67 -1.23 -2.96 2.04 1.59 -6.65
- - - - - - - - - - - - - - - - - - 4.32 -
- - - - - - - - - - 4.32 - - - - - - - - -
- - - - - - - 1.16 - - - - - 3.27 - - - - 3.02 -
- - - - - - 2.38 -1.22 2.44 - 2.19 - - -0.43 1.85 - - - - -
- - - - - - - 0.64 - - - - 0.37 1.85 - 2.46 - 1.72 2.25 -
- - - - - - - 0.12 2.93 - - - - 0.9 - - - - 3.24 -
- - - - - - - 1.46 - -0.14 3.36 0.68 - 0.21 0.52 0.89 - - - -
0.51 2.27 2.6 1.59 0.38 - -1.56 -1.14 - - - - - - - - - 0.52 -3.19 0.1
-0.06 - - 2.58 0.88 - -0.97 -0.75 - - 2.15 -2.07 - 0.07 1.35 0.58 - - -1.6 -
- - - - - - - - - - - - - - - - - - - -
- - - - - - -0.89 -1.1 - - 3.76 - - - - - 2.44 - - -
-9.13 -6.0 -4.31 -6.46 -4.85 -6.29 0.45 -0.05 0.82 0.16 0.11 -0.58 1.35 0.54 0.67 -1.18 -0.02 -0.76 2.32 -1.81
- - - - - - - 1.05 2.58 - 1.56 1.23 1.43 - 1.52 - - - 0.12 -
- - - - - - - 2.22 0.31 2.49 1.29 - 1.38 -1.15 1.11 - - - -0.23 -
0.97 - - -23.23 1.07 -0.57 -0.23 0.6 0.22 -4.81 -0.07 0.2 1.76 1.33 - 1.24 -0.95 - -2.56 -0.66
0.39 -0.83 -0.05 -0.23 -0.7 -4.61 -0.52 -0.3 0.23 0.12 -0.08 0.34 -0.22 -0.51 -0.21 1.07 1.02 0.07 -1.58 0.8
0.28 -0.72 0.99 -0.33 -0.27 -5.15 -1.34 -1.31 0.4 0.21 -4.38 -0.61 -2.38 -3.79 -2.92 1.28 1.36 0.67 -3.26 1.79
- - - - - - - - - - 4.32 - - - - - - - - -
-0.39 - - - - - - -0.82 -1.5 -0.82 -0.08 - -0.81 -1.95 0.45 3.35 0.69 -1.06 0.92 -1.3
-0.39 1.76 - - - - 1.49 0.24 -0.1 1.37 - -1.38 - 0.72 - - 1.91 - 1.35 -
- - - - - - 0.24 0.61 1.26 1.63 2.81 - - 0.43 - 1.14 - - 0.3 -
- - - - - - - - - - 4.32 - - - - - - - - -
- - - - - - - - - - 4.32 - - - - - - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.