Heatmap: Cluster_115 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule
Ovule, mature
Ovule, pollinated
Strobilus, female
Ovulate strobilus
Microstrobilus
Kernel
Leaf
Leaf, female
Leaf, male
Leaf, salicylic acid
Leaf, seedling
Leaf, truncation control
Leaf, truncation treatment
Leaf, water
Yellow-green stripe leaves
Green leaves
Stem
Cambium
Root
- - - - - 3.26 1.89 0.11 - - - - - 0.53 - - - - 1.37 0.72
-0.36 -1.41 0.66 0.13 -0.15 1.2 -4.3 -0.77 0.33 1.4 0.79 1.16 -1.54 1.08 -0.92 - 0.44 -3.11 -5.06 -
-3.01 -0.57 -1.91 -1.36 -1.37 -2.18 0.85 0.95 0.41 -0.04 0.05 0.21 1.2 0.99 0.36 0.53 1.3 -3.16 -4.68 -3.32
- - - - - - - 0.99 1.36 1.66 0.02 -0.46 0.37 0.36 0.37 0.88 1.56 -0.63 -0.27 -1.36
- - - - - - - - - - - - - - - - - - - -
-4.21 -5.7 -5.96 -5.09 -3.82 -0.65 -7.48 1.1 1.37 -0.07 0.62 1.22 -2.42 -0.44 0.1 2.17 1.52 -2.8 -9.41 -3.1
-0.76 -1.99 -0.83 -0.47 -0.86 -0.8 -0.27 0.41 -0.18 -0.09 1.42 -0.33 -0.31 -0.15 1.36 0.29 0.74 -0.96 -0.33 -0.29
- - - - - - - 4.32 - - - - - - - - - - - -
- - - -1.95 -4.57 -1.55 -3.81 0.16 0.3 0.3 0.46 1.12 -1.96 -1.07 0.91 1.63 1.39 -0.44 -0.57 1.27
1.75 - -23.59 -22.94 1.35 -7.06 - 0.98 1.05 0.84 - 2.02 - - - - -18.58 1.74 -3.68 -0.41
-4.77 - -3.84 - - -2.02 - 1.37 0.31 -0.72 2.15 -1.63 -1.14 -1.37 0.26 1.72 2.28 - -1.88 -
-0.36 -1.59 -1.04 -1.82 -0.27 -0.53 -2.01 0.39 0.44 0.71 1.28 -0.42 -2.69 -1.71 1.61 1.13 0.81 -1.32 -1.12 -0.87
-0.97 -2.14 -2.19 -0.15 -1.0 -1.71 -0.34 0.38 0.19 0.09 0.77 0.33 0.76 0.43 0.62 1.01 0.9 -0.84 - 0.07
-7.94 -3.8 -5.86 -8.28 -5.1 -5.01 -1.58 -0.77 1.52 2.13 -2.96 3.28 -0.85 -0.29 -2.47 -3.58 -3.87 -9.01 -5.79 -3.17
-3.47 -4.0 -8.05 -0.57 -0.31 -0.4 - 0.12 0.03 0.63 -1.49 2.05 -2.99 -3.21 -1.73 1.32 2.33 0.39 -10.55 -3.91
- - - - - - -2.29 1.03 1.3 1.65 1.11 -0.58 -1.22 -1.31 2.22 1.26 -0.12 - -0.98 -
-3.37 -3.48 -5.57 -1.19 -2.96 -3.19 -8.5 0.29 0.09 0.69 0.24 1.99 1.13 1.05 0.25 -0.03 1.01 0.7 - -
-0.22 - 1.84 - 0.76 - - 0.63 -0.93 - 2.27 -0.2 - -0.7 - 2.46 - - - -
- - - - - - - - - - - - - - - - - - - -
-3.22 0.3 -2.93 0.13 -2.63 -0.37 -1.28 0.98 0.71 0.06 0.05 -0.03 -0.26 0.43 0.33 1.86 1.14 -4.2 -5.49 -3.71
-1.35 -0.46 -2.56 1.06 -0.09 0.14 -1.38 0.69 1.04 1.09 -1.09 0.68 -0.44 -1.21 -1.05 0.11 -0.63 1.08 -0.32 -4.49
4.08 -1.86 - - - - - -8.93 - - - - - - - - - - 1.5 -
- - -0.51 - -14.32 -6.75 1.01 0.06 2.45 1.82 - 0.6 -2.12 -0.12 - 0.97 0.92 - -6.06 -0.53
- - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - - - - - -
-4.74 - -4.52 -1.78 -3.31 -3.64 -2.87 1.1 1.78 0.27 0.66 1.03 -1.28 -0.81 0.1 2.0 1.28 -3.34 -2.53 -2.62
-5.39 -2.87 -6.73 -3.91 -4.66 0.97 -3.52 -0.01 1.12 1.1 -1.79 2.16 -0.1 -0.5 -0.57 -0.04 1.07 -2.98 - 1.06
-2.62 - - - - - - -1.47 2.28 2.19 -0.95 2.1 -0.83 -0.93 -0.84 -0.51 -0.04 -1.79 - 0.71
-4.09 -4.95 -5.54 -4.95 -4.65 -0.01 -1.12 0.79 -0.45 -0.06 -1.11 -0.95 -4.27 -4.78 -0.06 2.61 2.65 -5.03 - -0.99
-5.31 - - - -3.01 -0.77 0.08 0.87 -0.0 0.43 -0.59 -0.75 -5.34 -4.41 -1.09 2.49 2.66 -3.87 -6.92 -2.33
- - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - - - - - -
-2.29 -1.92 -1.1 -1.01 -0.89 0.97 -4.6 -0.24 1.46 1.6 -2.56 0.52 -1.98 -2.19 -2.67 1.36 0.85 0.5 -2.03 0.19
- - -1.04 - 1.1 - -4.5 2.51 0.48 -1.19 1.09 -0.66 1.71 -2.04 -0.81 - - -0.2 - 1.04
- - - - - - - - - - - - - - - - - - - -
- - - - - - - 4.32 - - - - - - - - - - - -
- - -5.69 - -5.48 -4.25 -5.76 -0.33 0.78 1.61 1.32 -0.51 -0.67 -1.16 1.44 1.17 1.74 -1.04 -2.42 0.09
-2.21 -3.01 -1.57 -2.97 -1.76 -3.62 -2.4 -0.16 0.61 1.44 1.34 -0.42 -1.63 -1.88 1.29 1.01 1.59 -0.56 -1.15 0.02
-3.6 -5.59 -5.12 -3.34 -3.61 -0.53 -7.55 1.5 1.55 1.42 -0.08 0.47 1.08 0.93 -0.42 0.88 0.67 -5.79 - -
-1.54 - - -0.49 -3.81 - -0.29 1.64 0.66 0.62 0.39 -1.11 1.23 0.75 0.09 1.23 1.37 - - -
- - - - - - - - - - - 4.32 - - - - - - - -
- - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - - - - - -
- - - - - - - 4.32 - - - - - - - - - - - -
-9.04 -11.71 -11.14 -5.17 -7.59 -5.18 -12.57 0.29 1.23 1.06 -0.78 2.06 -0.81 -0.11 -0.46 2.4 1.02 -8.7 -14.35 -9.69
- - - - - - - - - - - - - - - - - - 4.32 -
-5.15 - -4.81 -5.14 - -4.89 -9.05 1.02 1.24 0.04 1.88 0.45 -3.81 -2.39 0.99 1.65 1.97 -4.04 -7.97 -4.5
-6.05 - - - - -5.12 -7.96 0.35 1.64 0.59 0.39 0.02 -3.82 -2.47 -0.13 1.93 2.73 -5.24 -7.97 -3.57
-5.25 - -3.91 - -5.11 -2.91 -6.34 1.61 1.18 -0.67 1.74 0.36 -3.84 -2.07 0.6 1.28 2.27 -3.82 - -5.64
- - - - - - - 4.32 - - - - - - - - - - - -
-4.57 -5.05 -5.04 -1.23 -0.4 -2.69 - 1.08 0.5 0.01 -4.35 1.31 -0.24 -0.34 -4.31 0.76 3.01 -4.88 - -7.08
-3.2 -3.58 -3.73 - - -0.24 - 1.25 1.15 -0.07 -0.07 1.36 -3.25 -1.07 -0.53 2.13 1.97 -2.66 -7.29 -4.06
-0.36 -0.21 -0.88 0.4 -1.35 -2.69 -3.66 1.48 0.09 -0.52 -0.85 0.56 -0.74 -0.96 -1.75 1.45 2.35 - -5.22 -
0.33 -1.51 -0.26 -0.18 -1.99 -0.65 -2.47 0.07 0.75 0.07 0.52 0.2 -1.19 -1.17 -0.15 2.0 1.51 -1.54 -2.99 -2.74
- - - - - - - - - - - - - - - - - - - -
- - - - - - - -0.28 - - - - - - - - 4.26 - - -
-0.96 0.01 1.09 0.45 -0.48 -0.03 -0.62 -1.17 0.17 0.67 0.44 1.28 -1.7 -0.79 0.48 -0.67 0.12 -0.03 -1.8 -1.19
-5.09 - - - -2.45 -0.04 -0.2 0.72 -0.55 -0.03 -1.29 -0.88 - - -0.53 2.64 2.66 -3.29 -4.66 -1.74
-2.51 -2.15 -1.59 -3.42 -1.88 -3.25 -4.17 0.81 1.03 1.75 -1.46 2.4 -0.63 -0.53 -2.81 -0.7 1.72 -0.95 - -
-3.94 -2.51 -5.55 -4.74 0.19 -1.06 - 0.73 1.02 1.39 -1.1 1.01 -3.36 -2.16 -1.29 1.46 2.48 -3.82 -3.73 -3.67
-2.15 -3.64 -3.11 -0.74 -0.45 -0.81 -7.49 1.18 1.11 1.27 0.93 0.24 0.73 0.18 0.49 0.04 0.88 -0.65 -8.52 -4.84
-0.15 0.36 -1.83 0.35 -1.06 -1.85 -1.2 0.86 0.7 1.03 0.75 -0.73 -0.28 0.04 0.83 -0.04 -0.18 0.57 -4.06 -1.86
- - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - - - - - -
-1.59 - - - -0.62 -0.29 - 3.11 -0.17 0.99 0.92 -0.03 -0.18 -1.0 - - 1.21 - -3.04 -
-6.27 -2.87 -8.38 -3.74 -5.24 -3.63 -5.85 -0.19 1.48 1.44 -1.48 2.94 -0.92 -1.48 -0.68 -1.3 0.55 -2.02 -9.4 0.68
-5.87 -2.1 -8.54 -2.91 -5.66 -3.05 -5.49 -0.2 1.23 1.58 -1.12 1.76 0.39 0.03 -0.86 -0.45 1.08 -4.32 - 1.85
- - - - - - 3.45 - - - - - - - - - - - 3.18 -
- - - - - - - 3.75 1.22 -9.62 - 2.07 - - - - - - - -
- - - - - - - - - - - - - - - - - - - -
-0.08 - - 4.05 - - - -0.77 - - - -0.88 - -0.49 - - - - -0.53 -
- - - - - - 1.9 0.44 0.81 0.91 - - 1.47 2.68 - - - 1.07 - -
-0.99 - 0.28 - -0.95 1.11 0.68 -1.02 0.66 0.25 0.16 2.18 0.61 -1.99 0.51 0.71 -1.92 - - -
- - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - - - - - -
- - - 3.55 2.19 - - -2.33 - - - - - - 0.42 - - - -4.62 1.1
-2.56 -0.68 -3.61 -0.42 0.1 -2.03 -6.15 0.92 0.96 1.32 0.22 0.75 0.48 -0.26 0.07 0.55 1.49 -5.48 - -1.93
- - - - - - - 0.56 1.66 1.84 -0.42 2.2 -0.7 -1.77 -2.03 0.98 1.72 - - -
-1.66 -3.14 -2.79 -1.64 -4.15 0.38 0.73 0.3 0.09 0.91 0.69 1.67 0.24 -0.29 0.38 0.33 1.02 -0.89 - -7.03
- - - - - - - - - - - - - - - - - - - -
-3.5 -2.24 -2.98 -0.72 -0.24 -0.72 -2.83 0.04 1.16 1.62 -3.04 2.58 -0.68 0.27 -2.37 -0.45 -0.06 0.26 -6.58 -5.11
- - - - - - - 0.04 - - - - - - - - - - 4.25 -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.