Heatmap: Cluster_43 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light - ZT1
Light - ZT3
Light - ZT5
Light - ZT7
Light - ZT9
Light - ZT11
Light - ZT13
Light - ZT15
Dark - ZT17
Dark - ZT19
Dark - ZT21
Dark - ZT23
Light - ZT25
Nutrient stress - Low nitrogen - 10%
Nutrient stress - Low phosphate - 0%
Nutrient stress - Low sulfate - 2%
Nutrient stress - Low micronutrients - 0%
Nutrient stress - NaCl - 75 mM
Nutrient stress - Mannitol - 100 mM
Nutrient stress - Control
Environmental stress - Prolonged darkness - 72h
Environmental stress - Cold - 4C
Environmental stress - Heat - 37C
Environmental stress - Control
Environmental stress - High light - 150 uE
Environmental stress - Control high light - 40 uE
0.17 -1.2 -0.27 -1.1 -2.83 -4.44 -3.0 -0.8 -3.42 -3.38 -2.79 -2.78 -0.72 -0.47 4.09 -1.64 -2.6 -3.09 -3.83 -2.53 -2.04 -3.13 -4.15 -2.22 -0.5 0.28
0.53 -0.19 0.46 0.67 -0.17 -0.49 -0.39 0.23 -1.38 -3.66 -3.36 -3.7 0.13 0.68 2.9 -1.41 -1.06 -0.52 -0.6 -0.29 -1.11 -6.27 -3.31 -6.01 0.88 -0.16
0.2 -1.25 -2.65 -1.87 -1.44 -1.39 -0.92 -0.88 -0.63 -0.51 -0.26 -0.01 0.28 -0.32 3.24 -0.75 -0.74 -0.83 -0.79 -1.02 -2.21 -0.2 0.29 -0.34 -0.16 -0.49
-0.23 -0.16 -0.25 -1.02 -1.38 -1.94 -0.72 -0.69 -0.03 0.23 0.69 0.64 -0.27 -0.74 1.7 -1.15 -0.77 -0.32 -0.76 -0.31 -3.26 0.96 0.44 1.06 0.3 0.12
0.27 -0.2 -0.44 0.12 -0.21 -0.7 -0.57 -0.42 -0.07 0.0 0.51 0.18 0.16 -1.03 1.28 -0.76 -0.94 -0.6 -1.1 -1.1 -1.37 0.7 0.8 0.26 0.86 0.23
-1.85 -1.18 -1.05 -0.3 1.06 1.3 1.15 0.83 -0.27 -0.57 -0.67 -1.58 -2.82 -3.41 3.07 -2.64 -1.39 -0.69 -0.42 -0.31 -4.94 -3.84 -1.32 -2.43 -1.07 -1.13
-8.21 -5.42 -5.3 -8.41 - -6.38 -3.88 -4.93 -2.91 -2.56 -3.9 -5.58 -6.91 -4.4 4.59 -0.15 -4.43 -2.79 -4.56 -4.99 -5.87 - -4.85 -6.56 -8.52 -10.07
- -6.13 -6.03 - - -8.02 -4.55 -4.38 -3.37 -3.2 -3.83 -5.94 -8.14 -4.1 4.6 -0.12 -4.62 -2.14 -4.93 -4.92 -7.72 - -4.13 - - -7.61
-8.11 -6.05 -5.84 -7.3 -5.01 -4.74 -3.95 -5.1 -2.57 -1.28 -1.54 -1.94 -6.48 -0.44 3.91 2.79 -1.36 -0.49 -2.31 -2.31 -5.24 -3.41 -5.65 -3.87 -3.0 -3.65
-1.85 -2.03 -0.5 -1.29 -1.86 - -1.16 -1.33 1.61 1.51 2.15 1.8 - - 2.53 -3.02 0.17 -3.46 -1.92 -2.14 -3.36 - -1.41 -0.14 -3.59 -1.47
-2.87 -4.93 -4.29 -3.06 -0.88 0.21 0.71 0.0 0.62 0.62 0.26 -0.32 -2.01 -0.37 2.82 -0.53 -0.23 0.39 -0.06 -0.29 -4.07 -1.8 0.61 0.15 -1.41 -2.48
-4.25 -1.8 -2.56 -2.21 -1.22 -0.15 0.4 -0.17 0.68 0.52 -0.47 -1.28 -3.17 0.26 2.76 0.32 -0.54 0.77 0.24 -0.16 -3.39 -1.73 -0.21 -0.45 0.15 -0.57
0.8 0.04 -0.39 -0.19 -0.73 -0.83 -0.13 0.14 -0.6 -0.32 0.05 -0.26 0.38 -0.45 1.86 -0.55 -0.61 -0.41 -0.5 -0.78 -2.6 1.02 -0.92 -0.55 0.73 -0.05
-1.74 -0.87 0.05 0.18 -0.5 -0.78 -0.24 0.07 0.38 0.65 0.8 0.71 -0.96 -0.09 1.27 -0.53 -0.45 0.15 -0.27 -0.06 -2.72 0.39 -0.49 -0.13 0.34 -0.0
-6.77 -5.46 -5.54 -7.61 -6.7 -6.43 -4.3 -4.24 -4.05 -3.2 -3.6 -5.36 -6.71 -5.47 4.65 -3.97 -4.02 -5.12 -6.13 -3.89 -9.34 -5.27 -4.56 -5.17 -4.36 -3.77
-5.61 -8.41 -5.99 -6.41 - -7.97 -5.1 -4.85 -4.93 -3.1 -3.7 -5.03 -5.58 -6.28 4.66 -4.99 -4.2 -5.91 -7.34 -4.27 - -8.38 - -5.7 -4.65 -4.07
-1.39 -0.92 -1.4 0.07 -1.17 -2.28 -1.64 -2.08 -1.87 -2.53 -2.56 -2.61 -4.04 -2.63 3.92 -0.72 -3.19 -2.06 -2.07 -2.94 -1.34 -1.15 -0.56 0.29 0.21 0.14
1.13 0.8 0.34 0.34 0.53 0.43 -0.42 0.06 -1.28 -0.5 -0.69 -0.24 1.09 -0.22 1.97 -0.95 -1.07 -0.92 -0.82 -0.73 -4.68 -0.09 -2.86 -1.04 -0.43 -1.22
0.19 -0.72 -3.28 -3.85 -3.22 -1.82 -0.34 -0.54 0.03 0.45 0.44 -0.3 -0.45 -1.18 3.53 0.43 -1.97 -2.23 -2.2 -1.47 -4.63 - 0.1 -0.35 -2.12 -1.25
-1.61 -0.25 -0.52 -0.43 0.26 0.73 0.93 0.63 0.3 0.65 0.01 -0.79 -1.99 -2.38 2.88 -2.37 -2.17 -1.65 -1.07 -0.12 -5.29 -5.33 0.23 -0.82 -1.26 -0.91
-1.85 -0.99 -0.84 -0.6 -0.4 -0.2 0.06 0.18 0.07 -0.02 -0.31 -0.67 -2.14 0.82 2.81 0.18 -0.33 -0.28 -0.46 -0.39 -5.88 0.49 -0.97 -1.67 -0.37 -1.04
0.42 0.37 0.47 0.72 -0.16 -1.38 -0.79 -0.45 -0.71 -0.22 0.16 0.33 0.33 -0.8 0.86 -0.67 -0.16 0.02 -0.56 0.02 -1.71 0.42 0.04 -0.0 0.04 0.39
-4.27 -4.6 - -5.41 - - -2.97 -5.27 -0.89 - -3.74 -3.66 -3.35 -0.5 4.5 - -2.47 -5.63 - -2.64 -5.93 - 0.13 -5.07 -4.42 -
-0.74 -0.97 -1.05 -0.67 -0.27 -0.66 -1.03 -0.44 -0.45 -0.87 -0.03 -0.23 -0.27 -0.16 2.39 -1.02 -1.68 -1.42 -1.79 -2.92 -0.41 0.85 1.02 0.6 0.99 0.41
-2.5 -3.33 -3.14 -2.1 -0.34 0.39 0.84 0.38 1.18 1.22 0.75 -0.24 -1.83 -0.09 1.76 -0.69 -0.79 -1.12 -1.25 -0.57 -1.74 -1.18 0.98 0.24 -0.14 -0.2
0.21 0.47 0.59 0.27 -0.56 -0.92 -0.71 -0.5 -0.25 -0.02 0.27 0.52 0.26 -0.08 1.5 -0.56 -0.05 -0.06 -0.71 -0.26 -2.69 0.54 -1.56 -0.72 -0.01 0.26
-1.91 -2.5 -2.25 -2.12 -2.21 -2.09 -1.11 -1.26 -1.19 -1.87 -2.01 -2.23 -1.85 1.35 3.07 0.52 0.02 -0.55 -0.49 -1.35 -0.4 -0.35 1.33 -0.66 0.49 0.05
-2.21 -2.73 -2.35 -2.29 -2.6 -2.58 -1.21 -1.39 -1.47 -1.97 -2.26 -2.46 -2.11 1.43 3.11 0.67 0.25 -0.39 -0.66 -1.2 -0.46 -0.65 1.32 -0.6 0.41 0.05
-0.28 -0.38 -0.48 -0.66 -0.76 -0.92 -0.19 -0.35 -0.31 0.07 -0.31 -0.51 -0.71 0.06 2.28 -0.01 -0.12 0.45 -0.42 -0.13 -2.11 -0.03 0.1 -0.14 -0.09 0.4
0.15 -0.18 -0.44 -0.32 -0.21 -0.21 0.04 0.23 0.32 0.2 0.41 0.25 -0.04 -0.46 1.71 -0.73 -0.86 -0.8 -0.9 -0.82 -2.58 0.23 0.4 0.06 0.04 0.09
-3.8 -6.25 -5.26 -6.34 -6.97 -3.97 -1.84 -2.67 -0.4 -1.26 -1.42 -1.93 -2.61 -0.23 4.39 -3.48 -3.18 -2.36 -4.07 -3.03 -3.59 -6.46 -0.9 -4.69 -2.47 -3.59
-3.33 -4.63 -5.03 -6.78 -6.51 -4.71 -1.93 -2.62 -0.5 -1.35 -1.33 -1.85 -2.84 -0.51 4.39 -3.78 -2.87 -1.96 -3.99 -3.53 -2.75 -6.14 -1.22 -2.84 -2.17 -2.89
-0.0 0.17 0.61 1.5 0.5 -1.06 -1.16 -0.31 -0.26 1.23 1.52 1.2 0.12 -1.05 1.85 -1.76 0.18 -4.49 -2.57 -2.69 -4.34 -2.61 -2.48 - -1.3 -1.88
0.86 0.21 0.62 0.75 0.41 0.15 0.02 0.06 -0.45 -0.3 0.15 0.19 0.68 -0.39 1.17 0.08 -0.76 -0.5 -0.47 -0.92 -1.42 -1.23 -0.84 -0.93 -0.55 -0.43
0.66 0.23 -0.05 -0.06 -0.17 -0.23 0.18 0.25 0.25 0.14 0.13 0.03 0.24 -0.78 2.24 -0.99 -0.8 0.24 0.2 -0.68 -5.83 -2.04 -1.65 -0.93 -0.49 -0.98
-2.1 -3.47 -2.34 -1.25 -1.25 -0.85 -0.25 -0.08 0.17 1.44 1.3 0.48 -0.92 -1.4 3.26 -3.36 0.31 -3.37 -1.9 -7.05 -6.35 -4.65 -0.23 -0.89 -1.05 -1.02
-4.48 -3.2 -1.99 -0.93 -0.53 -0.63 -0.3 -0.38 0.37 0.23 0.34 0.09 -6.31 -1.46 3.25 -1.16 -1.15 -1.29 -1.9 -1.72 -3.52 -2.44 1.08 0.26 -0.03 -0.03
-1.24 -1.14 -1.21 -0.77 -0.56 -0.17 0.1 -0.1 1.0 0.86 0.81 0.21 -1.29 -1.53 2.36 -1.79 -1.2 -0.94 -0.75 -1.03 -5.35 -1.17 1.71 -0.71 -0.51 -0.87
-1.55 -0.81 -0.7 -0.37 -0.17 -0.1 0.27 0.33 0.23 0.03 -0.18 -0.44 -2.16 0.25 2.87 -0.26 -0.64 -0.36 -0.67 -0.69 -4.32 -0.44 -0.62 -1.0 -0.24 -0.72
-2.05 -1.8 -1.77 -1.53 -1.03 -0.2 0.59 0.18 0.19 -0.96 -1.79 -2.49 -1.73 1.05 2.94 0.98 0.41 0.42 0.32 -0.47 -4.15 -1.1 -2.37 -2.86 -0.23 -1.43
0.08 -0.17 -0.48 -0.34 -0.23 -0.25 -0.48 -0.38 -0.79 -0.49 -0.38 -0.36 0.06 0.45 2.35 0.23 -0.61 -1.09 -1.35 -1.12 -1.94 0.44 0.13 -0.5 0.43 0.15
-0.93 -2.16 -2.11 -1.22 -0.65 -0.61 -0.39 -0.24 0.03 0.13 0.51 0.56 -0.82 -1.8 2.31 0.2 -0.86 -0.02 -0.49 0.15 -0.16 -3.67 1.11 1.24 -1.72 -0.89
0.73 -0.35 -0.8 -1.41 -2.63 -2.47 -0.34 0.28 0.03 0.12 0.17 -0.08 0.45 -0.21 2.85 -0.67 -0.85 -0.31 -0.32 -0.87 -4.69 -2.19 -1.03 -0.9 0.15 -0.08
-0.07 -0.76 -0.6 -0.38 -0.15 0.16 -0.09 -0.26 -0.63 -0.2 -0.27 -0.31 -0.07 0.56 2.41 0.41 -0.43 -0.15 -0.6 -0.39 -2.75 -0.29 -0.71 -0.78 -0.3 -0.05
-0.7 -1.17 -2.01 -3.61 -5.78 - -5.5 -3.56 -5.24 -3.01 -2.06 -2.1 -1.53 -3.97 4.4 -1.11 -5.12 -4.57 -3.87 -4.12 -2.0 -1.32 -3.42 -3.54 -1.05 -1.48
-0.89 -0.99 -1.02 -2.33 -1.86 -0.92 -2.41 -2.75 -1.79 -1.3 -0.87 -0.54 -1.66 -6.1 3.45 -2.7 -5.19 -8.14 -5.15 -5.24 0.89 -0.22 0.72 1.99 -0.55 -0.57
-0.45 -0.94 -1.39 -1.16 -1.12 -0.48 -0.09 -0.23 -0.94 -1.28 -1.74 -2.2 -0.83 0.84 2.85 0.36 -1.82 -0.55 -0.82 -1.57 0.62 -0.72 0.66 -0.79 0.34 0.28
-3.78 -3.22 - - - - -3.46 - - - - - - -3.06 4.27 -1.75 0.19 -3.11 -2.68 - -0.23 -1.04 -2.35 -1.36 -1.11 1.14
-5.32 -3.76 -4.87 -5.16 -3.66 -1.73 -0.97 -0.59 -0.25 -0.33 -0.19 -1.02 -4.85 -5.63 4.24 -3.66 -2.86 -2.09 -2.26 -2.48 -7.77 -0.69 -1.83 -1.17 -3.86 -4.48
-0.64 0.14 -0.05 -0.19 -0.8 -1.89 -0.64 0.07 0.16 0.26 0.67 0.46 -1.04 -1.47 2.06 -1.06 -1.02 -0.08 -0.69 -1.06 -3.74 -1.54 0.66 0.78 0.92 -0.1
-0.67 0.07 -0.73 -0.61 -1.01 -1.2 -0.62 -0.2 -0.41 -0.27 0.2 0.36 -1.21 -1.69 1.88 -1.18 -0.66 0.27 -0.52 -0.53 -4.74 -0.69 1.17 1.18 1.22 0.0
-3.71 -5.15 -3.15 -5.65 -3.52 -5.72 - -3.75 -4.74 -3.78 -5.77 -5.62 - -1.88 4.47 -2.87 -3.76 -1.71 -0.86 -3.29 -4.03 -4.54 0.64 -4.13 -6.41 -3.08
- - - - - - - -1.96 -1.86 - - - - -0.62 4.24 - -0.55 1.34 - -2.22 -2.29 -2.1 1.0 - - -
0.86 0.37 0.62 0.67 0.63 0.15 -0.01 -0.12 -0.99 -1.05 -1.09 -0.68 1.0 0.19 0.83 -0.24 -0.29 -0.18 -0.6 -1.14 -2.28 0.74 -1.33 -1.17 -0.19 -0.1
-3.54 -3.85 -3.69 -3.33 -3.2 -1.99 -0.38 -0.46 -0.65 -0.78 -1.16 -2.05 -2.93 1.25 3.97 -0.08 -0.73 -1.31 -0.95 -2.36 -5.05 -4.8 -1.26 -2.98 -2.69 -2.09
0.55 0.06 0.07 0.11 0.13 -0.22 0.17 0.29 -0.18 -0.1 -0.16 -0.11 0.77 0.15 -0.13 0.32 -0.45 -0.05 -0.37 -0.47 -1.36 0.56 -0.47 -0.6 -0.1 0.09
-4.1 -2.44 -2.36 -2.09 -1.46 -1.26 -1.06 -0.93 -0.18 -0.65 -0.74 -1.56 -4.76 0.4 3.98 -0.39 -1.43 -0.91 -1.33 -1.83 -4.28 -1.92 -1.88 -1.48 -1.86 -1.45
-0.43 0.14 0.25 0.03 -0.24 -1.02 -0.9 -0.92 -1.7 -1.03 -0.89 -0.58 -0.32 0.75 2.51 0.53 0.48 -0.07 -0.24 -0.46 -3.05 -0.39 -1.25 -0.73 0.15 0.0
-3.11 -2.16 -0.94 -0.61 -0.15 -0.48 -0.32 -0.0 0.3 0.48 0.45 0.02 -2.56 -0.15 1.85 0.11 -0.49 0.31 -0.06 -0.48 -0.57 0.06 1.03 0.18 -0.45 0.07
-0.62 -1.49 -1.82 -1.99 -2.12 -1.36 -0.52 -0.49 -0.9 -1.27 -1.66 -1.91 -0.7 -0.74 4.05 -1.21 -2.13 -1.53 -1.58 -1.34 -4.36 -3.31 -2.37 -2.11 -1.55 -1.01
-0.33 -1.22 0.09 1.94 0.51 -2.2 -2.84 -0.31 -3.58 - -3.62 -4.1 -5.32 - 3.79 - - - - -5.59 -2.88 -2.56 -3.73 - -0.55 1.07
-0.79 -1.6 -1.38 -1.68 -2.49 -3.05 -2.8 -2.3 -2.82 -3.16 -2.94 -3.78 -1.49 -2.52 4.29 -0.52 -4.22 -3.5 -3.6 -2.4 -4.79 -0.61 -3.3 -2.63 -0.93 -0.8
-0.82 -0.37 -0.43 -0.12 0.11 0.19 0.22 0.27 0.38 0.37 0.38 0.47 -0.66 -1.13 1.87 -1.43 -1.16 0.01 -0.39 -1.23 -3.42 -0.05 0.4 -0.27 0.36 -0.19
-0.62 -1.59 -1.88 -1.21 -0.51 -0.03 0.11 0.06 -0.16 -0.38 -0.38 -0.7 -0.56 -1.5 3.62 -1.1 -1.32 -1.22 -1.06 -1.17 -4.41 -2.23 -0.71 -1.74 -1.39 -1.37
-1.45 -3.54 -5.39 -5.07 -5.17 -4.34 -2.67 -2.94 -1.34 -0.62 -0.06 -0.7 -1.47 -6.81 3.73 -4.83 -2.6 -4.08 -4.23 -2.62 -3.89 2.11 -0.8 -2.09 0.86 0.5

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.