Heatmap: Cluster_236 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Egg apparatus cell (small)
Egg apparatus cell (medium)
Egg apparatus cell (large)
Ovary
Uninuclear microspore
Generative cell
Pollen
Sperm
Pollen tube (bicellular)
Pollen tube (tricellular)
Flower (bud, female)
Flower (bud, male)
Flower (female)
Flower (male)
Flower (tepals)
Fruit (female)
Apical meristem
Shoot (female)
Shoot (male)
Leaf (male)
Leaves
Root (male)
AMTR_s00003p00083310 (evm_27.TU.AmTr_v1.0_scaffold00003.49)
-4.15 -4.27 -4.55 0.54 -1.4 -2.72 -4.98 -6.94 -8.3 -10.03 1.36 1.44 2.11 1.97 2.28 -5.21 -1.99 -0.93 -0.74 -4.67 - -12.51
AMTR_s00005p00232410 (evm_27.TU.AmTr_v1.0_scaffold00005.114)
-0.05 0.37 -1.31 1.4 -2.99 -6.57 -8.25 -7.9 -4.8 -5.04 1.69 2.01 1.05 -3.06 1.3 -3.59 0.58 -1.71 -1.84 -1.49 -5.08 1.0
AMTR_s00006p00172180 (evm_27.TU.AmTr_v1.0_scaffold00006.65)
- - - - 2.96 - 1.88 - 2.12 1.6 - - - 1.67 - - - - - - - -
-0.08 -0.23 0.46 -4.08 0.63 -0.78 -2.31 -2.12 -1.31 -1.22 0.75 0.36 1.36 2.34 1.12 -3.17 -0.48 -1.41 -0.87 -1.79 -1.4 -2.41
AMTR_s00006p00269000 (evm_27.TU.AmTr_v1.0_scaffold00006.322)
1.55 - 0.22 -3.84 -0.74 -5.35 -5.54 -8.02 -5.69 -6.27 0.74 1.19 1.5 -0.08 1.46 0.05 -0.19 0.58 -0.13 -1.99 -2.8 0.98
0.63 0.01 -1.12 -1.5 0.27 -4.07 -1.47 -1.02 -0.28 -0.62 0.67 0.64 0.35 -0.01 1.09 0.18 -1.0 1.16 -0.29 -0.42 -0.15 0.21
-1.08 -1.28 -0.98 -2.4 -1.67 -2.85 -5.13 -8.23 -5.67 -5.51 0.61 0.87 1.98 0.08 1.31 -1.2 -0.25 2.26 1.22 -1.38 -3.74 -2.3
-0.39 -1.84 - 0.05 -0.65 -1.31 -0.28 -5.34 -0.22 -0.14 0.02 -0.54 0.17 1.81 1.8 1.88 -2.57 -0.69 -0.16 -1.86 -1.21 -1.42
AMTR_s00010p00221320 (evm_27.TU.AmTr_v1.0_scaffold00010.237)
1.21 - - - 0.48 - -3.72 - -1.01 -0.3 0.96 - 2.21 -0.23 1.79 0.62 - - - 1.27 - 1.05
-4.28 -4.21 -2.83 -10.18 -2.87 - -5.11 -8.95 -4.07 -3.88 1.22 0.96 1.33 -1.04 0.42 1.57 1.25 1.73 1.82 -2.01 -1.98 -2.99
AMTR_s00016p00211010 (evm_27.TU.AmTr_v1.0_scaffold00016.184)
- - - - 0.43 - -0.97 -0.93 -1.7 -1.19 0.8 1.16 1.35 0.95 1.38 -0.87 -0.71 0.68 0.4 -0.23 -0.65 1.17
AMTR_s00019p00166860 (evm_27.TU.AmTr_v1.0_scaffold00019.162)
-3.22 0.37 -1.18 -2.47 -0.56 -2.74 -2.83 -5.74 -1.23 -1.06 0.73 0.92 0.37 0.96 1.38 0.68 -0.09 1.06 0.55 -0.6 0.32 -0.58
0.6 - - -6.7 -1.98 - -6.16 -7.1 -4.77 -5.09 0.81 1.95 -0.32 -0.29 1.11 0.26 -1.61 1.4 1.68 0.86 0.56 -3.53
AMTR_s00019p00207660 (evm_27.TU.AmTr_v1.0_scaffold00019.247)
- - - 0.07 2.08 - -8.06 - - - 2.7 1.26 -1.07 -0.17 1.09 -2.11 0.77 0.58 -0.72 -3.68 - -2.09
AMTR_s00019p00207760 (evm_27.TU.AmTr_v1.0_scaffold00019.248)
- - - -2.77 0.76 - - -6.5 - - 1.96 1.93 -0.32 1.08 1.61 -0.04 0.29 0.83 0.22 -1.43 -3.91 -0.17
- - - -5.51 1.52 - -10.15 -8.35 - -10.1 2.23 1.88 -0.04 1.02 1.54 -1.08 -0.14 0.67 0.2 -2.63 - -0.86
AMTR_s00021p00242180 (evm_27.TU.AmTr_v1.0_scaffold00021.255)
-1.32 -0.18 -4.55 -0.18 -3.45 - -1.08 -2.17 -1.34 -1.05 0.67 0.98 1.74 -0.7 -0.57 -7.02 1.35 1.4 1.8 -0.71 -2.51 -1.07
AMTR_s00022p00230910 (evm_27.TU.AmTr_v1.0_scaffold00022.311)
1.02 -0.35 -0.03 0.88 -1.2 -6.59 -7.95 -8.94 -9.38 -9.25 1.0 0.75 1.68 1.74 1.52 -3.1 -0.03 -0.36 -0.95 -3.34 -6.05 -1.67
AMTR_s00024p00106400 (evm_27.TU.AmTr_v1.0_scaffold00024.54)
-4.75 -1.19 -1.54 -3.19 -0.17 - -5.76 - -4.12 -4.49 -0.15 0.94 0.97 -0.05 2.46 0.37 0.18 1.23 0.96 -1.2 0.65 -3.46
AMTR_s00025p00148550 (evm_27.TU.AmTr_v1.0_scaffold00025.166)
-7.34 -2.95 -9.14 0.68 -1.42 - -4.49 -8.16 -3.37 -2.83 0.75 1.55 1.06 0.59 3.06 -1.58 -1.96 -3.21 -2.84 -1.85 -4.36 0.93
AMTR_s00026p00235000 (evm_27.TU.AmTr_v1.0_scaffold00026.129)
- - - - 3.33 - 2.28 - - -0.11 - - 1.56 - -0.13 - - - - - - 1.2
AMTR_s00031p00110180 (evm_27.TU.AmTr_v1.0_scaffold00031.48)
- - - - -1.28 - -3.25 - -5.85 -6.42 0.53 0.03 2.71 3.47 0.41 - - - - - - -
- - - -3.59 -0.98 - -4.13 - -8.59 -6.9 1.73 0.01 1.08 2.49 0.01 - -0.81 1.48 2.13 -1.46 -2.92 -5.19
AMTR_s00034p00242520 (evm_27.TU.AmTr_v1.0_scaffold00034.136)
-7.51 -1.01 0.64 -0.26 -0.48 -0.88 -2.59 -2.23 -0.61 -1.43 0.81 0.3 0.21 -0.9 0.83 -0.06 1.21 0.41 0.19 0.91 -0.83 0.84
AMTR_s00036p00045550 (evm_27.TU.AmTr_v1.0_scaffold00036.11)
-3.19 -2.22 -1.76 -3.23 0.17 -7.18 -3.07 -4.75 -0.12 -1.94 0.74 0.95 -0.41 -0.41 1.75 -0.04 -1.03 1.98 1.26 -0.25 0.32 -1.22
AMTR_s00041p00015910 (evm_27.TU.AmTr_v1.0_scaffold00041.4)
0.06 -0.0 1.2 -5.73 0.16 0.43 -2.96 - -0.38 -1.21 0.36 0.75 0.71 0.75 1.51 -1.78 -0.35 -0.06 -0.14 -0.4 -2.44 -0.22
AMTR_s00041p00015940 (evm_27.TU.AmTr_v1.0_scaffold00041.5)
-0.67 -0.89 0.19 -1.51 0.36 -0.7 -2.67 -2.63 -0.64 -1.09 1.01 1.25 0.75 0.78 1.41 -2.48 -1.44 0.48 0.96 -0.69 -1.26 -0.65
AMTR_s00047p00186710 (evm_27.TU.AmTr_v1.0_scaffold00047.115)
- - - - 1.55 - - - - -0.83 2.27 - 2.21 1.45 2.66 - - - - - - -
AMTR_s00049p00210740 (evm_27.TU.AmTr_v1.0_scaffold00049.236)
- - - - -0.53 - -2.73 - -0.0 0.65 1.84 0.22 1.61 -0.78 2.22 -0.34 -2.76 0.03 -0.95 0.43 - 0.76
AMTR_s00050p00185180 (evm_27.TU.AmTr_v1.0_scaffold00050.47)
-2.52 - - - 0.64 - -1.73 - -0.66 -1.35 0.63 -0.35 1.41 0.65 1.06 0.09 0.39 0.46 0.95 -0.76 1.63 -0.11
-1.48 -1.6 -1.33 -0.85 -2.04 -1.35 -0.24 -2.01 -0.0 0.05 0.6 0.72 0.86 0.81 0.66 0.49 -1.18 0.96 0.72 -0.04 0.08 -0.29
AMTR_s00052p00165290 (evm_27.TU.AmTr_v1.0_scaffold00052.73)
- - - -6.15 -0.1 - -5.99 - - - 2.3 1.36 -0.57 -3.77 -1.27 1.49 -2.2 2.56 0.86 0.48 -1.99 -5.94
AMTR_s00052p00166190 (evm_27.TU.AmTr_v1.0_scaffold00052.75)
- - 0.17 -4.47 -3.83 - - - - - 1.93 -0.59 1.74 1.18 0.4 1.85 -1.61 2.31 - -1.09 - -
AMTR_s00053p00115370 (evm_27.TU.AmTr_v1.0_scaffold00053.65)
- - - 1.19 -3.46 - -2.7 -4.13 -1.98 -1.43 1.95 2.27 0.23 0.34 1.84 -2.51 0.15 -0.14 -3.44 0.26 -1.44 -2.17
AMTR_s00053p00132370 (evm_27.TU.AmTr_v1.0_scaffold00053.81)
0.38 - - - -0.8 - -2.32 - -3.39 -3.61 0.98 0.88 -0.39 0.95 -0.09 - -3.18 2.69 2.44 -4.87 - -1.71
AMTR_s00054p00028860 (evm_27.TU.AmTr_v1.0_scaffold00054.7)
0.31 0.42 - -9.3 0.17 - - -8.26 -7.23 -9.26 0.26 -0.19 1.08 -1.78 -0.9 0.19 1.41 2.17 1.66 0.45 -1.92 -2.49
AMTR_s00055p00136850 (evm_27.TU.AmTr_v1.0_scaffold00055.59)
-0.39 - - 0.2 -0.92 - -5.18 - -9.3 -8.55 -3.92 - 0.83 3.35 0.05 -2.49 -6.23 -4.44 -3.12 -0.19 -3.89 2.37
-4.39 - - -1.51 -0.48 -5.76 -4.32 -9.15 -4.4 -4.29 0.32 0.73 1.28 0.65 1.88 1.4 -1.9 1.07 1.33 0.29 -0.57 -0.54
AMTR_s00057p00009660 (evm_27.TU.AmTr_v1.0_scaffold00057.1)
- - - - 1.39 - - - - - 2.57 3.43 - - 1.41 - - - - - - -
AMTR_s00057p00050780 (evm_27.TU.AmTr_v1.0_scaffold00057.27)
-3.27 -1.21 -1.24 -0.02 -1.71 - -5.96 - -9.57 -9.12 0.03 -0.59 0.8 1.92 0.7 -3.96 0.73 2.28 1.43 -1.79 -0.53 -0.63
AMTR_s00063p00180280 (evm_27.TU.AmTr_v1.0_scaffold00063.59)
-1.73 -0.01 -2.26 - -1.42 -2.94 -6.11 - -8.46 -7.64 1.25 0.85 1.56 2.66 0.92 -4.56 -0.53 0.86 -0.15 -0.52 -1.08 -8.23
AMTR_s00065p00206690 (evm_27.TU.AmTr_v1.0_scaffold00065.196)
-4.75 0.92 -0.6 0.05 -2.65 -5.17 -8.93 - -11.3 -10.56 1.16 0.36 1.04 -0.37 1.11 -3.16 1.44 1.15 0.55 -0.42 0.01 0.51
AMTR_s00070p00170930 (evm_27.TU.AmTr_v1.0_scaffold00070.104)
0.49 -1.6 - - -1.51 - -4.71 - -9.24 -9.85 0.41 0.33 2.55 3.36 0.17 - -5.47 - -6.62 -6.4 - -
AMTR_s00072p00174000 (evm_27.TU.AmTr_v1.0_scaffold00072.123)
- - - - 4.46 - - - - - - - - - - - - - - - - -
-1.39 0.24 -0.89 - -3.03 -4.95 -6.27 - -10.17 -8.41 -0.2 -0.77 2.64 2.43 2.65 -5.5 -1.74 - - -6.13 - -6.77
0.65 -3.0 -1.87 -2.27 1.08 1.02 -4.02 0.3 -3.69 -2.71 1.38 -1.91 0.91 2.16 1.93 - -1.34 -3.1 -4.26 -4.01 -1.26 -3.16
-0.76 - - - 0.87 - - - - - 2.99 2.82 -1.84 1.51 -0.42 - - - - - - -0.54
AMTR_s00092p00132900 (evm_27.TU.AmTr_v1.0_scaffold00092.97)
- - - - 0.27 - -2.97 - -2.72 -2.85 1.88 2.33 1.25 0.77 1.93 - - - -0.84 0.86 - 0.46
AMTR_s00095p00148690 (evm_27.TU.AmTr_v1.0_scaffold00095.117)
- - - - 1.03 - - - - - 1.78 1.97 0.33 1.63 1.91 1.4 -0.02 - - -0.23 - -
AMTR_s00096p00127740 (evm_27.TU.AmTr_v1.0_scaffold00096.81)
- - - - 2.05 - -3.94 - - - - - 2.72 0.42 2.54 - - - - 1.94 - -2.19
-0.58 -1.44 -1.79 0.69 0.83 -3.87 -6.3 -6.05 -6.5 -6.46 0.66 1.01 1.34 -0.55 1.88 0.29 -1.29 0.87 0.33 -0.86 -1.93 0.18
-2.37 -3.52 -3.28 -3.14 -2.3 -3.72 -3.44 -5.64 -2.06 -2.26 1.07 1.32 0.54 1.93 1.33 2.02 -1.94 0.4 -0.39 -0.64 -0.49 -0.95
AMTR_s00110p00081860 (evm_27.TU.AmTr_v1.0_scaffold00110.41)
1.28 - - - 0.9 - -3.37 - -2.35 -2.46 0.85 0.85 0.67 -0.48 0.67 0.62 -0.18 0.69 0.55 -0.14 -0.09 1.26
AMTR_s00114p00109380 (evm_27.TU.AmTr_v1.0_scaffold00114.45)
- - - - -0.93 - -2.02 - 0.24 -1.86 2.28 2.47 -1.12 0.88 -2.5 1.9 0.33 - - -0.53 - 0.26
AMTR_s00119p00095770 (evm_27.TU.AmTr_v1.0_scaffold00119.74)
-0.93 0.63 0.18 -0.28 0.27 0.46 -1.4 -3.5 -1.91 -1.96 -0.04 -0.37 0.29 1.35 1.44 0.65 -1.24 -0.29 -0.15 -1.08 -0.28 0.2
AMTR_s00128p00107240 (evm_27.TU.AmTr_v1.0_scaffold00128.36)
- - - - 1.59 - - - - - 1.19 2.97 0.75 0.52 1.48 - - - - - - 1.56
AMTR_s00141p00011830 (evm_27.TU.AmTr_v1.0_scaffold00141.1)
0.58 0.24 -1.11 -4.21 -0.72 -7.13 -6.41 - -8.03 -7.73 0.84 0.96 1.04 1.49 1.52 -1.49 -0.65 0.83 1.08 -2.49 -7.48 0.71
- - - -6.23 0.4 - -6.4 - -6.44 -6.99 -0.55 -0.52 1.8 3.47 -1.63 - -1.99 -3.8 -3.2 -4.61 - 1.98
AMTR_s00154p00080410 (evm_27.TU.AmTr_v1.0_scaffold00154.53)
0.7 -0.3 -1.51 -0.35 -3.58 -0.96 -2.88 -5.51 -1.99 -2.02 0.56 0.57 0.36 1.03 0.4 -4.21 1.1 1.24 0.98 0.19 -0.23 0.08
AMTR_s00160p00072570 (evm_27.TU.AmTr_v1.0_scaffold00160.26)
- - - -2.54 0.79 - -5.22 - -3.48 -4.21 1.49 -0.47 0.52 -0.23 1.11 1.28 1.19 -0.67 0.49 0.58 1.76 -1.62
-1.86 -0.4 - -3.65 -0.38 -4.94 -0.6 -3.84 -1.61 -0.9 -0.1 -0.04 2.37 2.02 0.28 0.12 -0.62 -0.52 -0.73 0.01 0.56 -0.7
AMTR_s00226p00020420 (evm_27.TU.AmTr_v1.0_scaffold00226.10)
- - -1.11 -1.2 -1.15 -3.11 -0.45 - 0.28 -0.0 1.1 -0.16 1.5 0.46 1.22 -1.01 0.68 -1.22 0.36 1.09 -1.64 0.81
- - - -0.32 -0.29 - -1.29 - -0.16 -0.28 1.44 1.16 0.38 -0.54 1.56 -0.8 0.66 1.32 0.89 -1.49 -0.25 -0.59

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.