Heatmap: Cluster_252 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light - ZT1
Light - ZT3
Light - ZT5
Light - ZT7
Light - ZT9
Light - ZT11
Light - ZT13
Light - ZT15
Dark - ZT17
Dark - ZT19
Dark - ZT21
Dark - ZT23
Light - ZT25
Nutrient stress - Low nitrogen - 10%
Nutrient stress - Low phosphate - 0%
Nutrient stress - Low sulfate - 2%
Nutrient stress - Low micronutrients - 0%
Nutrient stress - NaCl - 75 mM
Nutrient stress - Mannitol - 100 mM
Nutrient stress - Control
Environmental stress - Prolonged darkness - 72h
Environmental stress - Cold - 4C
Environmental stress - Heat - 37C
Environmental stress - Control
Environmental stress - High light - 150 uE
Environmental stress - Control high light - 40 uE
0.35 0.13 0.41 0.23 -0.42 -0.09 -0.3 -0.13 -0.25 -0.47 -0.36 -0.36 -0.14 -0.41 0.05 -0.35 -0.36 -0.19 0.15 0.06 -1.73 1.41 0.41 -0.09 0.02 0.1
-0.26 0.21 0.38 0.51 0.27 -1.5 -0.7 -0.65 -0.65 -0.32 -0.24 -0.03 -0.37 -0.6 -0.3 0.48 -0.26 -0.22 -0.5 0.26 -2.88 1.63 0.03 0.14 0.1 0.63

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.