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Heatmap: Cluster_95 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Light - ZT1
Light - ZT3
Light - ZT5
Light - ZT7
Light - ZT9
Light - ZT11
Light - ZT13
Light - ZT15
Dark - ZT17
Dark - ZT19
Dark - ZT21
Dark - ZT23
Light - ZT25
Nutrient stress - Low nitrogen - 10%
Nutrient stress - Low phosphate - 0%
Nutrient stress - Low sulfate - 2%
Nutrient stress - Low micronutrients - 0%
Nutrient stress - NaCl - 75 mM
Nutrient stress - Mannitol - 100 mM
Nutrient stress - Control
Environmental stress - Prolonged darkness - 72h
Environmental stress - Cold - 4C
Environmental stress - Heat - 37C
Environmental stress - Control
Environmental stress - High light - 150 uE
Environmental stress - Control high light - 40 uE
- 0.79 - 1.82 0.25 - - - - - - - - 0.89 - - 2.07 - 2.0 0.46 1.77 1.22 - - 1.25 -
- - - - - - - - - - - - - - - 3.54 3.85 - - - - - - - - -
-2.81 0.27 0.27 0.07 0.71 0.56 1.02 0.74 0.19 -0.2 -0.08 -0.64 -1.38 -5.59 -0.71 -2.1 1.96 -5.22 -4.22 -5.11 -0.02 0.15 -2.95 0.55 0.91 0.23
-2.67 0.14 0.2 -0.03 0.58 0.69 1.0 0.59 0.41 0.07 -0.15 -0.55 -1.3 -6.1 -0.85 -2.23 1.74 -5.39 -3.72 -5.97 0.11 0.46 -3.12 0.53 1.08 0.34
- 0.42 0.4 - - 0.07 - 0.19 - 2.67 - - - -0.42 - 2.19 2.38 - 0.1 1.67 - - - - - -
- - - - - - - - - - 2.99 - - - - - 4.18 - - - - - - - - -
2.29 - - - - - - - - - 2.08 - - - - - - - 1.8 - - - - 2.76 - 2.73
- - - - - - - - - - - - - - - - 4.7 - - - - - - - - -
-0.14 -1.26 - 0.24 -0.94 - - - - - - -0.73 - -0.43 -0.93 1.39 1.61 1.33 1.91 - 1.07 -0.24 0.88 -0.94 0.52 1.27
- - - - - - - - - - - - - - - - 4.7 - - - - - - - - -
- - - -0.25 - 2.25 2.01 - - 0.85 - - 0.07 - 2.04 0.74 2.38 - - 0.48 - -0.72 - - - -0.83
- - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - - - - - - - - - - - -
- 3.36 - - - - - - - - - - - 2.53 - - 3.31 - - - - - - - - -
- - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - 1.0 3.38 - 1.45 3.08 - 0.1 - 0.43 - - -
0.6 -0.28 -2.27 0.18 - -0.63 0.94 -0.14 1.27 -0.68 -2.34 -2.17 0.09 0.01 0.6 -0.26 0.39 -2.41 0.78 0.6 -1.54 - -2.93 -0.49 1.59 1.03
- 2.87 - - - - - - - - - - - - - - 3.49 - - - - 2.9 - - - -
- 1.31 - - - - - 1.62 - - - - 1.63 - - - 3.52 - 2.56 - - - - - - -
- - - - - - - - - - - - - - - 2.71 3.41 1.97 1.93 - - - 0.17 - - -
1.56 - - - 1.13 - - - - - - - - 0.84 - - 2.95 - 2.22 1.1 - 1.03 - 1.33 - -
-1.02 - -1.01 -0.02 -0.11 1.56 0.2 - -0.42 -0.52 -1.0 -0.33 - - -0.62 -1.11 3.15 -2.16 -1.36 -0.74 1.7 -0.68 - -0.02 -2.62 -
-0.24 - - - -1.82 -1.51 0.07 0.45 0.05 1.23 -1.52 - - 1.2 1.55 2.16 1.68 - 1.47 - -2.46 - - 0.66 -2.2 -0.41
- - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - - 4.7 - - - - - - - - -
2.03 - - -0.44 -0.69 - 0.85 - -0.35 0.52 - -0.31 - - 1.05 - 0.8 -0.94 1.58 -0.72 - 0.28 0.53 1.84 -1.01 0.1
- - - - - - - - - - - - - - - - - - 3.38 - - - - - - 3.96
- - - - - - - - - - - - - - - 2.9 3.11 - 3.31 - - - - - - -
- - - - - - - - - - - - - - - - 4.41 - 2.27 - - - - - - -
- - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - - - - - - - - - - - -
-2.53 -2.64 - - -2.52 - - -1.01 - - -1.21 -0.54 - 0.08 1.96 2.94 1.29 0.11 1.93 1.34 - - - 0.14 - -1.64
- - - - - - - - - - - - - - - - 4.57 - - - - - 1.13 - - -
-1.54 -0.2 0.34 -0.7 -3.07 -1.82 -0.97 -1.06 -0.74 1.49 1.71 1.13 0.13 -1.73 -4.21 -2.66 2.57 -0.63 -0.87 -0.97 -0.54 -3.91 -3.18 0.69 -2.07 -0.53
- - - - - 3.72 - - - - - - - - - - 3.68 - - - - - - - - -
-0.63 1.22 - - - -1.23 -0.23 -1.59 1.74 - - - - -0.13 0.99 -0.46 0.75 -1.02 1.63 0.95 0.42 1.06 0.01 - 0.89 -0.06
- 1.21 - - - 1.21 0.97 - - - - - 1.36 - - 1.1 2.16 - 1.95 0.58 - - - 1.86 0.34 -
- - - - - - - - - - - - - 0.77 - 2.25 3.14 0.77 2.35 1.98 - - - - - -
- - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - - 4.7 - - - - - - - - -
- - - - - - - - - - - - - - - - 4.7 - - - - - - - - -
- - - - - - - - - - - - - - - 3.59 3.81 - - - - - - - - -
- - 2.43 - - - 0.86 - - - - - - - 0.76 - 3.05 - 1.81 - 2.41 - - - - -
- - - - - - - - 3.18 - - - - - - - 3.33 - 2.78 - - - - - - -
- - - - - - - 0.68 2.84 - - - 1.23 0.21 - 2.78 - - 2.79 - - - - - - -
- -0.91 - - - 0.74 - - - -1.21 -1.2 - -1.27 -1.33 -1.25 1.38 -0.93 0.09 2.51 - 1.59 0.84 0.18 -0.56 -1.78 2.3
- - - - - - - - - - - - - - - - - - 3.28 0.75 - - - - - 3.87

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.