Heatmap: Cluster_6 (HCCA)

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

Gene
Light - ZT1
Light - ZT3
Light - ZT5
Light - ZT7
Light - ZT9
Light - ZT11
Light - ZT13
Light - ZT15
Dark - ZT17
Dark - ZT19
Dark - ZT21
Dark - ZT23
Light - ZT25
Nutrient stress - Low nitrogen - 10%
Nutrient stress - Low phosphate - 0%
Nutrient stress - Low sulfate - 2%
Nutrient stress - Low micronutrients - 0%
Nutrient stress - NaCl - 75 mM
Nutrient stress - Mannitol - 100 mM
Nutrient stress - Control
Environmental stress - Prolonged darkness - 72h
Environmental stress - Cold - 4C
Environmental stress - Heat - 37C
Environmental stress - Control
Environmental stress - High light - 150 uE
Environmental stress - Control high light - 40 uE
10.4 14.03 13.23 10.67 12.56 17.2 16.21 14.3 18.39 13.43 12.23 10.16 7.62 10.26 13.97 7.57 12.26 13.12 17.91 15.1 1.11 15.69 22.79 20.03 14.94 13.3
7.77 9.31 7.52 8.21 7.17 4.51 5.79 5.93 6.26 5.68 6.41 6.49 6.55 5.08 5.35 6.13 5.95 9.73 6.26 6.8 3.21 10.05 15.66 9.25 10.84 6.35
2.55 3.11 2.54 1.83 1.69 2.22 3.03 2.99 3.01 3.15 3.11 3.02 2.19 3.12 3.15 3.17 2.57 4.5 4.38 2.31 1.14 5.06 8.7 6.54 7.93 4.63
1.71 2.99 3.6 3.94 4.89 4.84 4.2 4.75 3.52 3.62 3.94 2.87 1.5 2.48 2.89 3.2 3.08 7.83 3.59 3.97 0.78 6.07 13.42 6.91 5.04 4.12
0.29 0.12 0.04 0.18 0.26 0.21 0.18 0.2 0.07 0.06 0.11 0.07 0.13 0.14 0.04 0.08 0.16 0.26 0.25 0.16 0.03 0.16 0.72 0.2 0.26 0.28
22.17 13.35 10.89 13.06 18.36 15.88 18.96 17.34 13.57 13.67 13.78 15.03 22.28 4.61 6.37 4.5 8.76 13.02 10.73 13.08 1.68 10.79 33.03 11.32 13.45 10.14
89.39 118.89 93.11 79.9 51.19 43.21 58.2 76.92 72.38 53.82 50.07 58.69 70.56 53.94 63.91 64.16 69.91 118.16 112.31 75.86 36.15 105.39 185.55 84.47 136.68 106.41
7.01 4.59 4.54 4.4 5.34 5.13 4.87 5.05 4.65 4.35 4.97 6.1 6.13 5.95 5.42 4.67 4.91 6.7 6.53 4.74 3.13 3.09 11.14 6.95 5.62 5.87
3.68 4.57 2.98 3.76 3.42 2.78 2.75 3.25 3.79 3.35 3.61 2.94 4.57 2.17 3.29 2.94 2.37 4.92 3.09 1.88 0.66 6.38 6.02 2.18 6.3 4.32
50.14 33.51 36.94 40.77 43.38 46.28 39.41 41.95 31.88 29.31 24.88 32.13 54.23 18.32 15.35 19.98 23.84 29.28 23.11 23.06 16.47 26.07 86.21 26.48 47.91 27.15
62.29 49.68 36.97 38.0 38.32 41.88 49.1 50.76 42.89 36.37 37.35 40.65 50.35 23.23 26.09 24.21 41.05 50.26 52.15 40.84 6.69 25.97 89.71 69.89 50.88 44.78
2.31 1.24 0.57 0.42 0.52 0.72 1.26 1.97 1.82 1.92 2.05 1.31 1.98 0.77 1.0 0.83 0.88 2.7 1.55 0.99 0.19 1.17 4.15 4.01 2.93 2.25
10.03 2.7 1.69 2.06 2.79 4.75 7.54 8.97 8.29 9.62 9.43 8.5 8.58 3.56 4.34 3.65 3.67 5.92 5.32 4.59 1.1 2.56 16.36 8.44 6.05 4.23
3.32 9.7 7.29 7.46 9.28 11.34 8.38 5.72 4.63 3.36 3.35 3.92 2.67 7.99 7.69 5.71 7.4 8.6 11.62 7.63 1.17 6.53 7.4 6.84 6.21 13.37
6.1 4.63 4.06 7.14 7.04 8.14 6.77 8.43 6.2 3.89 5.74 4.9 4.11 3.03 3.75 2.19 3.85 6.94 6.11 4.42 0.55 4.84 9.83 8.84 10.51 7.85
4.76 1.58 0.76 0.91 2.17 3.77 5.95 5.58 6.15 5.22 4.7 3.88 4.63 2.88 3.72 2.33 3.34 4.52 4.8 3.11 0.89 2.78 10.75 7.67 5.85 3.62
10.16 11.39 9.02 9.65 9.33 11.47 14.5 15.46 13.01 9.92 11.27 11.15 8.32 5.99 4.65 5.57 6.32 8.71 9.22 6.39 1.19 10.95 17.65 12.2 13.9 9.5
9.28 10.81 6.94 8.19 10.27 10.76 10.07 9.37 8.61 8.81 8.19 9.04 6.3 11.71 10.92 9.47 8.77 11.72 13.16 8.4 2.22 13.41 20.43 13.62 11.72 14.85
49.71 53.15 49.34 51.54 48.89 62.74 48.13 46.47 41.74 31.34 33.06 33.25 37.04 35.49 44.46 37.66 38.44 49.55 61.39 43.8 14.46 41.19 69.53 71.12 63.3 54.16
2.69 2.98 1.76 2.19 1.73 1.89 3.2 3.67 3.62 3.23 3.21 2.64 2.59 1.79 1.79 1.81 1.57 2.73 2.51 1.95 1.42 3.15 4.42 2.51 3.7 2.46
9.29 10.64 9.27 9.19 8.12 7.47 9.41 9.51 9.74 9.01 9.66 9.93 8.06 7.78 6.48 7.28 7.17 10.98 11.57 8.97 4.61 9.03 20.57 8.89 8.82 7.9
13.65 8.02 7.38 6.64 5.94 7.82 7.62 8.56 10.2 8.73 10.13 10.23 9.23 5.12 8.09 4.56 5.69 9.32 9.32 7.07 7.14 2.31 16.74 13.75 6.99 5.79
3.26 2.09 1.85 2.7 4.48 3.57 4.8 4.54 7.21 8.62 7.83 4.43 4.35 3.5 5.38 2.58 4.18 4.84 2.58 2.83 1.24 1.95 13.44 11.37 14.65 8.56
7.32 3.72 2.3 5.04 4.46 5.49 5.68 4.86 4.7 4.05 3.83 4.14 6.25 2.7 1.98 2.62 2.05 3.51 3.02 1.77 0.62 2.49 12.17 5.2 6.18 3.7
3.99 4.35 2.36 3.31 4.05 4.78 4.56 4.86 3.43 4.48 3.59 3.25 3.08 1.51 3.3 3.08 2.55 4.77 4.06 3.94 1.51 4.06 7.41 3.03 4.19 2.53
0.65 0.89 0.9 1.12 1.44 1.31 1.4 1.85 1.17 1.27 1.54 0.89 0.59 0.88 0.82 1.09 0.66 1.29 0.92 0.65 0.84 0.89 2.0 0.86 1.98 1.33
38.57 36.08 30.99 27.22 32.23 38.35 31.82 27.95 29.57 24.93 26.71 30.34 28.05 28.97 32.53 24.83 29.52 36.08 42.21 34.63 7.66 33.49 83.21 63.82 61.91 52.48
10.54 6.16 4.71 3.44 2.83 3.67 4.98 5.08 5.45 5.02 5.31 4.91 9.32 3.2 3.59 2.9 3.13 5.95 5.1 3.39 1.65 4.64 17.6 3.91 7.57 5.39
16.99 18.18 15.8 16.04 17.92 20.21 20.39 17.39 13.1 12.49 14.95 14.92 13.07 16.17 15.11 20.18 16.84 20.5 19.89 19.01 5.57 20.93 27.65 13.18 14.97 12.91
8.57 5.41 4.37 4.92 7.14 6.96 8.21 5.85 6.8 5.69 6.85 7.62 10.3 3.28 4.3 3.21 4.14 7.15 7.41 4.12 2.25 5.92 12.64 6.41 6.04 4.49
7.93 2.85 1.48 2.13 5.6 9.9 12.45 11.35 11.17 9.1 7.63 6.8 7.17 4.92 4.93 3.65 7.23 10.96 9.85 6.8 2.28 5.96 25.43 14.87 12.02 8.01
3.56 6.12 5.49 5.19 4.87 5.81 4.11 4.59 4.83 4.33 4.92 5.1 2.97 5.76 5.25 4.56 4.12 5.84 5.51 3.34 0.44 10.46 9.21 6.17 6.4 6.99
14.93 10.86 10.35 10.54 10.67 7.96 12.37 12.79 9.99 9.49 10.18 8.92 14.17 14.93 12.79 14.21 9.8 19.5 15.33 10.55 5.04 24.48 22.12 12.27 16.18 14.4
11.05 9.05 8.75 8.42 8.52 9.08 9.85 7.86 8.08 6.79 7.17 6.64 8.77 5.41 8.36 5.34 5.64 10.61 10.41 6.36 3.93 1.64 25.39 10.99 7.54 9.78
30.63 19.87 12.49 13.64 15.1 17.28 21.62 21.03 23.66 23.55 21.99 21.16 23.15 11.61 12.88 12.28 17.36 20.15 19.98 19.9 9.77 5.87 37.61 28.43 21.66 11.45
1.32 0.31 0.11 0.05 0.14 0.51 0.57 0.64 0.63 0.68 0.47 0.28 0.58 0.0 0.06 0.0 0.17 0.52 0.39 0.29 0.18 0.14 2.29 0.79 0.79 0.98
3.4 1.93 1.82 2.28 2.41 2.16 2.99 2.57 2.08 1.91 2.41 2.2 2.65 0.82 1.14 0.98 1.44 2.04 1.91 1.73 0.88 1.93 6.0 1.66 3.13 1.65
9.53 3.01 0.8 0.84 1.26 3.57 9.01 8.87 7.65 6.57 6.25 5.86 9.24 4.61 4.17 3.4 5.51 10.48 8.38 5.95 2.39 3.1 18.92 11.98 11.57 6.42
0.18 0.19 0.11 0.34 0.7 0.74 0.96 0.83 0.52 0.47 0.45 0.35 0.16 0.16 0.18 0.19 0.39 0.65 0.69 0.38 0.08 0.84 2.26 1.71 2.26 1.21
3.0 1.21 0.94 1.41 2.44 3.51 3.09 2.97 2.81 2.46 1.75 1.22 2.38 2.39 1.56 1.98 1.81 2.49 3.14 1.99 0.74 3.42 6.34 7.14 6.12 4.04
9.17 3.4 1.63 2.27 4.0 6.18 7.94 6.98 6.35 5.41 5.05 3.46 7.36 3.2 2.94 2.43 3.29 5.0 4.56 2.88 0.85 2.29 14.19 8.3 5.52 4.45
2.08 1.62 1.14 1.17 1.01 0.74 1.04 1.34 1.29 1.2 1.58 1.38 1.28 2.26 1.45 2.19 1.08 3.19 2.62 1.08 0.66 4.33 4.1 2.91 3.84 3.06
1.94 0.76 0.07 0.22 1.33 1.36 1.02 0.47 1.63 2.11 1.5 2.01 2.19 0.54 0.06 0.35 0.39 1.17 0.84 0.49 1.2 0.68 6.12 1.4 1.35 0.8
28.89 20.95 12.65 11.0 13.0 14.98 19.3 20.51 19.13 18.73 16.31 13.52 20.48 11.48 12.89 11.48 15.75 24.37 22.75 16.51 8.34 13.61 47.75 20.74 22.48 15.69
35.45 12.28 8.0 6.31 9.78 15.19 22.97 16.09 16.69 18.57 19.71 22.1 27.5 10.77 14.74 10.48 14.62 20.19 21.19 15.57 4.35 19.48 45.14 33.54 21.41 19.96
24.05 7.88 3.93 3.29 3.74 8.24 14.67 14.91 10.78 12.35 11.7 15.35 16.27 10.08 13.3 7.64 12.51 21.98 18.02 16.37 4.09 11.09 35.43 28.72 27.12 19.4
0.91 0.7 0.65 0.93 1.26 0.75 1.08 1.29 0.9 1.21 1.5 0.44 0.92 0.77 1.06 0.74 0.78 2.28 1.73 0.97 0.41 2.16 6.52 4.08 3.66 1.9
0.09 0.07 0.07 0.25 0.47 0.44 0.57 0.59 0.33 0.2 0.34 0.14 0.0 0.05 0.16 0.15 0.3 0.36 0.43 0.13 0.14 0.32 0.82 0.59 0.77 0.33
19.64 11.85 10.72 11.69 13.01 14.86 16.48 15.87 11.74 12.08 12.92 15.11 18.2 6.7 8.23 7.39 9.54 14.76 13.28 9.82 2.45 12.42 33.58 7.13 11.4 9.01
13.99 16.93 11.62 12.7 13.75 14.42 14.01 12.1 10.76 10.49 9.04 10.14 10.22 5.64 10.11 9.13 10.2 16.28 15.69 10.81 4.65 6.24 40.92 14.33 15.02 9.86
0.92 0.86 0.39 0.95 1.06 0.9 1.2 1.29 1.06 1.07 1.28 0.98 0.91 0.45 0.56 0.62 0.61 1.01 0.7 0.67 0.77 2.03 1.91 1.21 1.41 0.85

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)