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Heatmap: Cluster_232 (HCCA cluster)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Roots (apex), 7 DAG
Roots (differentation zone), 4 DAP
Roots (elongation zone), 4 DAP
Roots (meristematic zone), 4 DAP
Roots (stele cells), 7 DAS
Roots (tip)
Leaves (rosette), 21 DAG
Leaves (rosette), 29 DAG
Leaves (rosette), 35 DAG
Leaves (rosette), 42 DAG
Leaves (rosette), 57 DAG
Epidermis cells
Mature guard cells
Stems (internode)
Stems (internode), senescent
Meristem (M1-3), 7-9 DAG
Meristem (M4-6), 1-12 DAG
Meristem (M7-1), 13-16 DAG
Axis of the inflorescence
Pedicel
Flowers (receptacles)
Flowers (floral buds)
Flowers (sepals)
Flowers (petals)
Flowers (stamen filaments)
Flowers (anthers)
Flowers (carpels)
Flowers (ovules)
Stigmatic tissues
Pollen
Siliques
Siliques, senescent
Pods of Siliques
Pods of Siliques, senescent
Embryo
Endosperm
Seeds, dry
Seeds, from senescent siliques
Seeds, young
Seeds, germinating
Seedlings, 5 DAG
Seedlings, 11 DAG
Seedlings, 14 DAG
Seedlings, etiolated
AT1G07340 (STP2)
 - - - - - - - -4.72 - -5.64 - - - - - -9.81 -9.02 -8.24 - -6.92 - -5.91 -6.36 -7.0 - 5.44 -2.39 -5.93 -7.0 -3.66 -7.9 - - - - -4.51 -6.41 - -7.76 -6.28 - - - -7.83
AT1G13140 (CYP86C3)
 -3.88 -2.82 -2.44 -1.56 - -2.19 -4.44 -3.37 -3.76 -3.65 -3.52 - - -2.0 -1.88 -2.01 -2.57 -1.59 -2.29 -2.33 -2.38 -2.44 -3.19 -4.41 -3.96 5.22 -1.06 -2.14 -2.73 -4.58 -2.83 -4.57 -2.74 -4.12 -1.31 -1.91 -2.94 -3.47 -1.94 -2.64 -3.75 -3.29 -2.8 -3.16
- - - - - - - - - - - - - - -0.22 - - - - - -3.35 - - - - 5.35 -1.28 0.43 - - - - - - - -2.92 - - -1.03 - - - - -
- - - - - - - - - - - - - - - -5.59 - - - - - 1.95 -4.33 - - 5.22 -2.97 - - 1.17 -7.47 - -5.37 - - -1.78 - - -5.64 - - - - -
- - - - - - - - - - - - - - - -2.79 - - - - - 3.44 -0.83 - - 5.02 - - - - - - - - - - - - - - - - - -
- - - -4.99 - - - - - - - - - - -6.46 -9.43 -9.65 -7.25 - -6.54 - - -3.9 - -6.9 5.45 -3.2 - -6.62 -5.45 -7.2 -6.78 - - - -5.27 -4.23 - -7.31 -6.93 - - -6.82 -7.38
- - - - - - - - - - - - - - - - - - - - - - - - - 5.43 -3.14 - - - -1.94 - -2.34 - - - - - -1.59 - - - - -
- - - - - - - - - - - - - - - - - - - - - - - - - 5.16 -1.01 - - -0.58 -2.02 - -2.78 - - 2.66 - - -2.17 - - - - -2.51
AT1G71160 (KCS7)
 - - - - - - - - - - - -6.47 - - -6.46 -8.66 - - - -7.01 - - -5.54 - - 5.33 -4.36 - - - -2.37 - -1.96 -5.71 -1.54 1.45 -5.03 - -7.88 -7.69 - - - -
AT1G72980 (LBD7)
 - - - - - -4.7 -4.26 -5.88 -2.6 -0.49 -2.51 - - - -0.19 - - -6.09 -3.75 - -3.14 1.39 -2.41 - - 5.15 -2.29 -2.22 - -0.24 -2.96 - -3.55 -1.72 - -0.1 -1.7 - -2.46 -3.19 -2.77 - -4.07 -5.46
-5.31 -3.54 -4.53 -4.84 - -4.69 -4.55 - - - - - - -6.4 -6.31 -7.2 -4.94 -3.41 -5.38 -6.4 -5.1 -3.8 -4.06 -6.6 -5.9 5.42 -3.39 -3.82 - - -6.03 - -6.44 - -2.79 -3.45 -6.88 - -4.4 -5.3 -5.85 - - -8.19
- - - - - - - - - - - - - - - - - - - - - - - - - 5.44 -2.72 - - -1.16 - - - - - -2.9 - - - - - - - -
- -2.81 - - - - - - -5.47 - - 1.9 -0.14 -4.69 -1.08 - - - - - - - -5.6 - -5.17 5.25 -4.34 - - - - - -5.74 -4.83 -2.94 -2.39 - - -5.43 - -5.48 - - -
-5.29 -1.48 -7.44 -7.8 - - - - - - - - - - - - -9.2 -8.67 - - -0.16 -1.59 -5.43 -7.44 -7.22 5.05 -0.53 1.16 -7.43 -2.17 -1.52 -6.96 -4.79 -4.51 - 1.79 -6.52 - 1.01 -5.77 - - -8.63 -5.14
AT2G31470 (DOR)
 -3.14 -2.37 - - - - - - - - - - - - - - - - - - -1.2 1.37 - - - 4.91 -3.11 - - 2.4 -2.78 - -5.21 -3.15 - 2.09 - - -3.74 -1.14 - - - -3.67
0.19 -1.11 -0.4 - - -2.24 - - - - - - - - - -1.84 -5.56 - -2.92 - - - - - - 5.25 -2.57 - - -2.91 -4.52 - - - - 0.51 - - -2.45 -1.21 - -1.99 - -1.57
-2.79 - -4.56 - - -5.19 - - - -6.18 - 1.63 - 0.94 -0.49 -1.87 -3.85 -3.4 -3.4 - - - - -2.03 -1.32 5.12 -2.46 - - -4.35 -2.46 - -3.34 - -4.27 -0.63 -4.9 - -4.42 -2.07 -5.22 -3.44 - -1.41
- - - - - - - - - - - - - - -2.18 - - - - - - 0.34 - - - 5.17 -5.5 - - 2.72 -7.16 - - - - - - - - - - - - -
- - - - - - - - - - - - - - - - - - - - - - - - - 5.46 - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - - - - - - - - - - - 5.22 -4.76 - - 1.56 -0.67 - -0.6 - - 1.21 - - -2.78 - - - - -
-3.19 -4.44 -3.67 -4.18 - -4.09 -0.11 -2.45 -2.54 -5.44 -3.8 -5.67 -1.54 -1.53 -5.35 -4.0 -3.29 -3.04 -3.58 -0.6 -2.9 -1.59 0.73 -3.01 -2.53 4.98 -2.6 -2.12 0.49 -2.06 -1.61 -5.32 -1.59 -3.99 -3.63 -2.57 -5.6 -7.03 -3.43 -2.02 -0.6 -0.61 0.79 -2.61
- - - - - - - - - - - - - - - - - - - - - - - - - 5.28 -0.4 1.34 - 0.84 - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - - - - - - - - - - - 5.45 -2.61 - - - - -2.93 - - - -3.73 - - - - - - - -
-1.19 - - - - - - -3.05 -1.61 -1.68 -1.36 - - -0.32 2.17 - -1.32 -3.51 -0.71 - -0.76 - - - - 4.8 -1.92 -0.72 - -2.34 -1.39 -2.63 0.0 - - 1.32 - - -3.3 -3.93 -3.21 -0.25 0.29 -4.06
- - - - - - - - - - - - - - - - - - - - - - - - - 5.17 -2.57 - - - - - - - - 2.93 - - -3.52 - - - - -
- - - - - - - - - - - - - - - - - - - -3.15 - - - - - 5.45 -3.27 - - - - - - - - - - - - - - - - -
- - - - - - -0.5 -4.71 -4.88 -4.59 -4.82 -5.02 - -1.56 -3.24 -7.42 -5.87 -6.73 - -2.87 -1.95 -0.66 -0.32 -6.72 -4.77 5.21 -3.41 -7.24 -4.33 -5.12 -1.8 -5.46 -3.28 -0.42 -5.76 -2.49 -8.71 - -1.64 -4.81 -0.7 -2.67 -0.94 -0.66
-5.54 - - - - - - - - - - - - - -4.57 -8.19 -8.22 -7.54 -7.15 -7.66 -8.41 - -5.19 -7.4 - 5.45 -3.57 - - -7.05 -7.88 - -9.3 - - -7.23 - - - -9.34 -8.01 - - -3.0
AT3G52160 (KCS15)
 - -7.25 -5.4 -3.55 1.19 -5.79 -5.13 -3.74 -4.13 -4.21 -4.85 -2.03 - -4.95 -4.46 -8.15 -6.3 -5.5 -4.38 -4.85 -5.39 -7.09 -4.71 -7.31 -6.88 5.31 -3.55 -5.12 - - -6.01 -5.71 -5.53 -7.15 -1.96 -2.06 -2.18 -4.65 -6.33 -5.38 -5.2 -6.13 -4.92 -5.4
- - - - - - - - - -0.88 -0.22 - - - - - - - - - - -0.68 -4.21 - - 5.14 -3.45 -3.3 - -0.58 -6.44 - - - - 2.46 - - - - -1.77 - - -
- - - -1.65 - - - - - - - - - - -2.39 -4.61 -1.54 -2.47 - - -4.67 1.39 -4.23 - - 5.09 -1.48 0.36 - -0.11 -0.76 -3.31 -1.57 - -0.06 -0.07 -2.69 - -1.62 -3.12 - - - -5.27
- - - - - - - - - -2.11 - - - - - - - - - - - - - - - 5.45 -4.28 - - - - - - - - - - - - - - - - -
-6.01 - - - - - -5.3 -9.97 -10.4 -10.39 -11.06 - - -7.75 -6.33 -7.73 -7.0 -7.78 -8.75 -6.5 - - -5.31 - -7.43 5.45 -4.04 -8.75 -9.4 - -6.93 -6.75 -8.94 - -10.18 -6.67 -7.22 -9.41 -9.25 -7.06 -4.84 -9.35 -7.13 -7.8
0.23 -0.43 1.08 -0.11 - 1.43 -0.36 -5.09 -7.48 - - - - -5.53 -0.04 -5.11 -6.23 -5.85 -3.53 -3.67 - -4.52 -3.69 -1.64 - 4.89 -4.27 - - - -5.69 -0.29 -7.59 -5.7 -3.8 -2.42 -0.06 -1.77 -8.1 -0.01 -5.57 -1.75 -2.48 -1.94
- - - - - - - - - -6.32 - - - - - - - - - - -5.83 -0.08 -4.55 - -2.37 5.11 -3.09 - - 3.0 -4.78 - -6.68 -3.66 - -6.73 - - -6.01 - - - - -
-0.29 0.19 -0.48 - - -3.16 -1.23 -4.46 -4.2 -5.01 -5.55 - - -2.88 - - -8.36 - - -2.86 -2.81 0.56 -1.66 -4.96 -3.94 4.97 -3.83 - -3.29 0.4 -2.75 - -3.54 - -4.73 0.02 - - -2.61 -0.34 0.74 -0.51 -1.39 -0.86
AT4G28395 (A7)
 -8.6 - - - - - - - - - - - - - -7.02 -9.49 -9.3 -8.28 -10.23 -7.32 - - -4.48 -10.48 -5.9 5.45 -2.74 -8.7 -8.76 - -9.66 -6.41 -12.37 -10.2 - -12.39 -6.51 -10.95 -12.63 -8.45 - - - -
-6.69 - - - - - - - - - -9.37 - - - - -10.64 -9.88 -10.07 - -6.22 - - -5.46 - -6.41 5.45 -3.94 - -7.83 - - - - - -7.61 - -7.24 -8.33 - -6.9 - - - -
- - -5.56 - - - - - -8.14 - - - -2.93 - -5.52 -7.53 - -7.27 - -6.48 - - -5.5 -6.56 -6.98 5.45 -5.23 - - - -7.31 - -6.56 - - -3.24 -6.96 - -7.91 -7.28 - - -5.75 -7.36
- -1.83 - - - - - - - - - - - - - - - - - - - - -1.8 - - 5.4 -2.49 - - -2.54 -1.76 - -1.82 - - -1.58 - - - - - - - -
-7.87 - - - - - - - - - - -5.7 - - -8.09 -9.79 -9.01 -8.64 - -7.12 - - -5.31 - -8.41 5.46 -4.95 - - - -8.48 -8.14 - - - - - - -10.31 -10.05 - - - -
-4.33 -5.88 - - - -6.64 -7.2 -6.93 -4.33 -4.87 -4.61 -6.66 - -5.15 -3.48 -6.92 -8.36 -9.05 -5.69 -6.73 -6.37 -2.55 -4.75 -5.23 -7.09 5.2 -4.38 - - -5.09 -1.48 -5.97 -1.94 -5.9 -3.0 2.49 -4.63 - -6.54 -6.38 -6.18 - - -
- - - - - - - - - - - - - - - - - - - - - - - - - 5.46 - - - - - - - - - - - - - - - - - -
AT5G27940 (WPP3)
 -2.27 0.17 -2.16 -3.08 - -2.32 -1.67 -2.02 0.23 1.57 1.38 - - -2.65 2.68 0.66 -0.62 -3.36 -3.03 -3.1 0.17 -0.82 -2.85 -1.75 -1.47 3.82 -0.46 1.04 -0.8 -0.64 -0.73 -2.53 -2.44 -0.37 -4.49 -1.99 -3.12 -2.64 0.33 -0.86 -2.67 -2.66 -2.91 -1.15
AT5G43110 (PUM14)
 - - - - - - - - - - - - - - - - - -6.53 - - - -3.2 -3.16 - - 5.23 -1.48 0.29 - - -4.81 - -6.3 - - 2.17 - - -3.58 - - - - -
AT5G43340 (PHT6)
 - - - - - - - - - - - - - - - - -6.28 - - - - -5.39 -5.01 - - 5.45 -3.49 - - -3.14 - - - - - - -5.89 - - - - - - -
- - - - - -1.54 - - - -5.74 - - - - - - - -6.36 - - - - -4.97 - -1.21 5.42 -2.51 - - - - - - - - -4.09 - - - - - - - -5.9
AT5G53510 (OPT9)
 - - - - - - - - - - - - - - - - - -7.96 - - - - -4.59 - -6.0 5.43 -2.7 - - -2.37 -4.63 - - - - -1.03 - - -4.31 - - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.