Heatmap: Cluster_283 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light - ZT1
Light - ZT3
Light - ZT5
Light - ZT7
Light - ZT9
Light - ZT11
Light - ZT13
Light - ZT15
Dark - ZT17
Dark - ZT19
Dark - ZT21
Dark - ZT23
Light - ZT25
Nutrient stress - Low nitrogen - 10%
Nutrient stress - Low phosphate - 0%
Nutrient stress - Low sulfate - 2%
Nutrient stress - Low micronutrients - 0%
Nutrient stress - NaCl - 75 mM
Nutrient stress - Mannitol - 100 mM
Nutrient stress - Control
Environmental stress - Prolonged darkness - 72h
Environmental stress - Cold - 4C
Environmental stress - Heat - 37C
Environmental stress - Control
Environmental stress - High light - 150 uE
Environmental stress - Control high light - 40 uE
-0.69 -0.85 -1.19 -0.51 -0.19 -0.12 -0.31 -0.3 -0.24 0.11 0.53 0.9 -0.27 -0.07 -0.15 0.02 -0.69 -0.56 -0.29 -0.54 0.98 0.9 0.04 0.88 0.14 -0.45
-0.62 -0.91 -1.18 -0.09 -0.07 -0.49 0.14 0.33 0.4 0.42 0.28 0.1 -0.75 -0.2 -0.46 0.94 -0.48 -0.23 -0.66 -0.77 1.33 0.13 -0.43 0.23 0.03 0.06
-0.93 -1.47 -1.21 -0.79 -0.74 -0.44 -0.33 0.08 -0.23 0.0 0.36 0.43 -0.71 0.62 -0.22 0.49 -0.56 0.08 -1.79 -1.65 1.51 -0.09 0.36 1.3 0.02 0.16
-0.5 -0.49 -0.3 -0.53 -0.19 -0.12 0.04 -0.11 0.22 0.34 0.34 0.35 -0.1 0.03 -0.52 0.41 -0.82 -0.27 -0.42 -1.2 0.99 0.43 -0.02 0.56 -0.21 0.18

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.