Heatmap: Cluster_226 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light - ZT1
Light - ZT3
Light - ZT5
Light - ZT7
Light - ZT9
Light - ZT11
Light - ZT13
Light - ZT15
Dark - ZT17
Dark - ZT19
Dark - ZT21
Dark - ZT23
Light - ZT25
Nutrient stress - Low nitrogen - 10%
Nutrient stress - Low phosphate - 0%
Nutrient stress - Low sulfate - 2%
Nutrient stress - Low micronutrients - 0%
Nutrient stress - NaCl - 75 mM
Nutrient stress - Mannitol - 100 mM
Nutrient stress - Control
Environmental stress - Prolonged darkness - 72h
Environmental stress - Cold - 4C
Environmental stress - Heat - 37C
Environmental stress - Control
Environmental stress - High light - 150 uE
Environmental stress - Control high light - 40 uE
0.34 -0.6 -0.58 -0.09 -0.31 -1.21 -0.4 -0.3 0.1 0.25 0.84 0.78 0.04 -1.23 -0.2 -1.04 -0.64 -0.53 -0.57 -1.25 -3.2 0.82 0.97 1.19 0.93 -0.66
0.8 -0.64 -1.19 -0.75 -0.29 -0.4 -0.01 -0.01 0.0 -0.14 0.59 0.34 0.1 -0.53 -0.78 -0.86 -0.26 -0.01 -0.21 -0.27 -2.62 0.46 0.85 0.56 0.95 0.23

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.