Heatmap: Cluster_57 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light - ZT1
Light - ZT3
Light - ZT5
Light - ZT7
Light - ZT9
Light - ZT11
Light - ZT13
Light - ZT15
Dark - ZT17
Dark - ZT19
Dark - ZT21
Dark - ZT23
Light - ZT25
Nutrient stress - Low nitrogen - 10%
Nutrient stress - Low phosphate - 0%
Nutrient stress - Low sulfate - 2%
Nutrient stress - Low micronutrients - 0%
Nutrient stress - NaCl - 75 mM
Nutrient stress - Mannitol - 100 mM
Nutrient stress - Control
Environmental stress - Prolonged darkness - 72h
Environmental stress - Cold - 4C
Environmental stress - Heat - 37C
Environmental stress - Control
Environmental stress - High light - 150 uE
Environmental stress - Control high light - 40 uE
0.49 0.57 0.65 0.77 0.8 0.52 -0.32 -0.56 -0.44 -0.19 0.3 0.6 0.57 -2.39 -1.67 -1.97 -0.75 -0.38 -0.69 -0.1 -0.58 0.21 0.29 0.43 -1.11 -0.32
- - -0.38 2.2 2.86 - 0.39 0.98 - - - - - - - - - -0.03 -0.69 0.63 -0.3 0.13 1.72 - - 0.81
-0.56 -0.15 0.44 1.0 1.56 1.58 0.82 0.29 -1.22 -1.59 -2.01 -2.15 -0.09 0.05 -0.7 0.68 0.49 -0.24 -0.49 -0.56 -3.37 -0.05 -1.68 -3.59 -0.17 -0.47
0.18 0.54 0.76 1.01 1.0 0.78 0.09 -0.55 -0.75 -0.56 -0.08 0.31 0.16 -2.98 -1.6 -2.75 -0.7 -0.3 -0.54 0.26 -2.87 0.85 -0.39 0.54 -0.56 -0.11
-3.05 -1.2 0.38 1.0 1.17 0.84 0.01 -0.43 -0.12 -0.32 -0.56 -0.8 -4.16 -1.36 -1.38 -1.54 -0.55 -1.33 -1.45 -0.21 -1.26 1.39 0.07 0.67 0.79 1.31
0.77 0.54 0.62 0.79 0.2 -0.43 -0.34 -0.13 -0.82 -0.69 -0.13 0.49 0.72 -1.37 -1.45 -1.4 -0.59 -0.36 -1.5 -1.12 -1.47 1.43 -1.29 0.65 0.37 0.16
-2.62 -0.85 0.31 0.6 0.34 -0.26 0.0 -0.04 0.04 0.28 0.13 0.09 -2.17 0.65 -0.43 -0.04 0.19 0.49 -0.2 0.45 -1.71 -0.75 -0.02 0.02 0.41 0.61
0.43 0.62 0.82 0.9 0.74 0.21 -0.3 -0.59 -0.58 -0.25 0.13 0.47 0.36 -1.78 -1.2 -1.44 -0.33 -0.2 -0.59 0.32 -1.42 0.65 -0.52 0.32 -0.99 -0.24
0.47 0.5 0.64 1.44 1.65 0.49 -0.04 -0.21 -1.44 -1.3 -1.35 -1.43 0.15 0.15 -0.57 0.05 -0.46 -0.44 -0.44 -1.1 -3.57 0.77 -1.18 -1.5 0.23 -0.58
0.43 0.66 0.94 1.05 1.05 0.49 -0.31 -0.44 -0.96 -0.48 0.1 0.45 0.44 -1.8 -1.12 -0.88 -0.12 -0.19 -0.4 0.45 -2.02 -0.45 -2.0 -0.23 -0.63 0.17
0.46 0.66 0.86 0.84 0.74 0.51 -0.23 -0.52 -0.35 -0.12 0.23 0.63 0.56 -2.5 -1.31 -1.97 -0.3 -0.33 -0.42 0.56 -0.94 -0.22 -1.09 0.31 -1.23 -0.51
-0.71 -0.69 -0.16 -0.1 -0.09 -0.03 0.2 0.36 0.29 0.31 0.18 -0.12 -0.74 0.52 -0.3 0.22 0.04 0.0 -0.04 0.28 -3.59 -0.04 -0.18 0.05 0.65 0.38
0.69 0.71 0.67 0.49 0.34 -0.09 -0.74 -0.78 -0.56 -0.24 0.24 0.67 0.65 -0.8 -0.73 -1.27 -0.06 -0.43 -0.41 -0.04 -2.5 0.68 -0.67 0.54 -0.36 -0.26
0.25 0.77 0.75 0.63 0.72 0.39 -0.32 -0.47 -0.46 -0.3 -0.04 0.18 0.46 -1.44 -0.58 -1.16 -0.07 -0.54 -0.32 0.4 -1.65 0.85 -1.27 0.05 -0.18 -0.59
-1.32 0.11 0.7 1.57 1.39 0.39 -1.33 -1.48 -2.17 -1.3 -0.29 -0.14 -1.3 -1.51 -1.19 -1.28 0.45 -0.47 -0.31 0.08 -3.28 0.93 1.08 0.55 -0.39 -0.02
-0.81 0.12 0.52 1.01 1.15 0.22 -0.64 -0.56 -1.06 -0.54 -0.08 0.29 -0.47 -0.57 -0.68 -0.36 -0.11 -0.29 -0.65 0.09 -2.11 0.64 -0.42 0.34 0.02 0.85
-2.59 -0.36 0.39 1.06 1.3 0.72 -0.14 -0.27 -0.64 -0.32 -0.02 -0.07 -2.26 0.7 -0.39 0.41 -0.24 -0.36 -0.95 -0.72 -2.03 -0.17 0.19 -0.76 0.35 0.68
-3.16 1.05 1.32 1.67 1.28 0.63 0.11 0.03 -0.72 -1.92 -2.66 -2.97 -2.2 0.14 -0.29 -0.34 0.24 -0.8 -1.08 -1.01 -5.45 0.11 -2.82 -3.76 1.34 0.49
0.72 0.79 0.51 0.61 0.5 0.45 -0.31 -0.47 -0.16 0.06 0.45 0.86 0.68 -2.78 -1.79 -2.21 -0.91 -0.7 -0.63 0.17 -2.06 0.35 -0.53 0.41 -0.53 -0.26
0.8 0.64 0.55 0.67 0.61 0.37 -0.22 -0.31 -0.36 -0.06 0.46 0.89 0.9 -3.08 -2.29 -2.32 -1.01 -0.57 -1.13 -0.31 -1.43 0.1 0.16 0.72 -1.14 -0.5
0.42 0.58 0.56 0.61 0.54 0.17 -0.51 -0.66 -0.5 -0.32 0.09 0.5 0.52 -2.94 -1.27 -2.33 -0.46 -0.24 -0.46 0.27 -0.6 0.96 -0.62 0.84 -0.57 -0.2
0.45 0.76 0.65 0.78 0.61 0.37 -0.17 -0.24 -0.33 -0.32 0.05 0.31 0.41 -2.24 -1.09 -1.73 -0.53 -0.11 -0.36 0.02 -2.25 0.61 -0.16 0.28 -0.27 -0.25
0.03 0.04 0.1 0.46 0.38 0.39 0.68 0.4 0.41 -0.6 0.03 -0.16 -0.42 -0.36 -0.56 0.1 -0.82 -0.37 -0.47 -0.64 -3.24 -0.92 0.02 0.69 0.4 0.61
-0.32 0.5 0.88 1.55 1.98 1.91 0.76 0.04 -2.56 -2.64 -2.72 -2.69 -0.57 -1.29 -1.19 0.47 -0.09 -0.63 -0.62 -0.33 -5.71 -1.88 -5.07 -3.42 0.17 -1.06
-2.62 1.0 0.79 1.41 1.39 0.97 0.8 0.42 -0.09 -1.09 -1.64 -1.63 -1.74 -0.86 -0.87 -0.67 -0.22 -0.46 -0.54 -0.28 -6.96 -1.62 -0.45 -2.25 1.14 0.2
-1.8 0.45 0.65 1.43 1.82 0.5 -0.49 -1.65 -1.09 -0.94 -1.96 -1.29 -2.23 0.95 -0.29 0.96 0.12 -1.1 -1.36 -0.74 -4.25 1.27 -0.8 -3.09 -0.38 0.1
-2.44 -1.07 0.13 0.18 0.25 0.21 0.45 0.42 0.24 0.23 -0.17 -0.35 -3.14 0.35 -0.41 0.17 0.03 0.29 -0.01 0.77 -2.61 0.11 -0.39 -0.47 0.62 0.64
0.59 0.69 0.82 0.74 0.79 0.45 -0.35 -0.59 -0.36 -0.14 0.34 0.7 0.67 -2.47 -1.12 -2.06 -0.5 -0.47 -0.52 0.23 -2.88 0.41 -0.61 0.44 -1.02 -0.82
-1.7 -0.26 0.71 1.37 1.31 0.73 0.23 0.19 -0.45 -0.38 -0.27 -0.24 -1.54 -1.23 0.12 -0.67 -1.07 -1.15 -1.45 -0.89 -1.63 -0.4 -0.27 0.21 0.59 1.07
-1.06 -0.67 -0.18 -0.12 -0.12 -0.33 0.04 0.21 0.28 -0.11 0.08 -0.32 -1.18 0.36 0.43 0.24 -0.36 0.17 0.01 0.1 -3.56 0.64 -0.61 0.45 0.81 0.6
-1.17 0.69 0.67 1.07 0.91 0.58 0.48 0.03 -0.39 -0.81 -0.95 -0.65 -0.86 -0.39 -0.42 -0.18 -0.33 -0.07 -0.66 -0.59 -3.9 -2.11 0.31 -0.91 0.97 0.97
-0.4 0.53 0.41 0.92 1.07 0.57 0.62 0.53 0.35 0.02 -0.21 -0.66 -1.1 -1.16 -0.2 -0.92 -0.78 0.11 -0.11 -0.11 -2.93 0.06 -0.28 -0.78 0.05 -0.37
0.34 0.52 0.89 0.99 0.99 0.53 -0.07 -0.26 -0.32 -0.08 0.44 0.67 0.54 -2.76 -1.32 -2.52 0.12 -0.33 -0.69 0.24 -3.56 0.04 -1.26 -0.2 -1.42 -0.12
0.51 0.55 0.65 0.77 0.75 0.49 -0.17 -0.36 -0.29 -0.12 0.33 0.71 0.63 -2.25 -1.53 -1.77 -0.8 -0.46 -0.74 -0.15 -0.59 0.1 -0.14 0.43 -1.06 -0.36
-0.21 0.06 0.45 0.84 1.02 0.82 0.67 0.44 -0.15 0.27 0.47 0.46 0.11 -0.43 -1.16 -0.83 -0.88 -0.7 -0.86 -0.41 -5.6 -1.99 -1.3 -0.56 0.19 0.62
-0.01 0.64 1.08 1.2 1.17 0.91 0.28 0.18 -0.4 -0.25 -0.07 0.08 0.04 -1.96 -1.21 -1.69 0.22 -0.15 -0.45 0.01 -3.09 -0.32 -2.66 -0.51 -0.91 -0.32
-1.78 -1.06 -0.28 0.55 1.12 1.17 1.0 0.67 0.32 0.51 0.55 -0.04 -1.64 0.65 -1.36 -0.67 -1.71 -1.98 -1.28 0.15 -3.47 0.07 -1.7 -1.72 0.37 0.85
-0.12 0.9 0.61 1.04 1.07 0.38 0.01 -0.23 -0.7 -1.06 -1.25 -1.58 -0.47 0.38 0.14 0.22 0.7 0.19 -0.02 -1.02 -5.93 0.23 -2.42 -1.62 0.63 -0.41
0.27 0.8 1.01 1.62 1.66 0.78 -0.91 -1.37 -1.26 -0.4 0.3 0.8 0.32 -2.6 -2.58 -2.77 -1.47 -0.78 -1.63 -0.19 -2.95 -0.53 -0.61 -0.03 -0.56 0.02
-3.2 -2.68 -0.03 1.04 1.28 0.95 0.4 0.68 0.65 0.33 0.17 -0.87 -3.23 -0.33 -2.63 0.31 -1.22 -2.17 -1.17 -1.07 -3.27 -1.23 0.21 -0.01 0.32 1.63
1.3 1.48 1.24 1.12 0.88 0.22 -0.31 -0.29 -0.57 -0.35 0.17 0.68 0.96 -2.22 -1.51 -2.1 -2.25 -1.99 -1.72 -2.09 -1.58 -0.12 -0.75 -0.48 -0.95 -0.79
1.04 0.88 0.94 -0.92 0.02 - - - 0.11 0.66 1.66 1.23 0.29 - - - - -0.54 -0.95 - - 2.64 - - -1.49 0.56
0.48 -0.38 -0.28 0.45 0.87 0.99 0.94 0.54 0.28 0.2 0.08 0.07 0.43 -0.3 -2.12 -0.67 -1.12 -1.0 -0.98 0.05 -5.62 -0.47 -1.6 -1.37 0.48 0.7
0.53 1.01 0.8 1.18 1.09 0.75 0.06 -0.41 -0.82 -1.93 -0.96 -0.24 0.03 -2.46 -2.68 -3.2 -1.37 -1.49 -1.15 -0.63 -0.57 0.78 0.22 -0.03 0.86 0.1
-0.5 0.88 1.29 1.29 0.68 -0.11 0.08 0.09 -0.08 -0.21 -0.14 0.4 -0.41 -0.33 -0.5 -0.06 -0.73 -0.36 -0.34 -0.31 -5.48 -0.82 -1.55 -1.36 0.44 0.02
0.67 0.87 0.84 0.85 0.74 0.16 -0.21 -0.27 -0.2 -0.04 0.39 0.68 0.79 -2.48 -1.72 -2.04 -0.86 -0.48 -0.85 -0.12 -0.73 0.42 -1.41 0.05 -1.0 -0.52
0.54 0.79 0.72 0.69 0.57 0.38 -0.33 -0.46 -0.33 -0.28 0.03 0.41 0.49 -2.35 -1.45 -1.95 -0.66 -0.3 -0.43 0.06 -0.57 0.82 -1.02 0.49 -0.48 -0.38
-1.55 1.23 1.73 2.03 1.72 1.11 0.15 -0.32 -0.6 -1.33 -1.35 -1.05 -2.4 -2.61 -1.08 -1.6 -0.29 0.2 0.06 0.17 -6.82 -0.25 -7.01 -3.82 -2.39 -2.3
0.46 1.02 1.09 1.42 1.01 -0.05 -0.68 -0.05 -0.23 -0.32 0.16 0.37 0.35 -2.84 -1.25 -2.74 -0.07 -0.4 -0.45 0.15 -4.87 0.21 -2.35 -0.83 -0.39 -0.12
0.11 -3.09 -0.49 1.0 1.34 1.05 1.37 0.91 0.02 0.2 0.58 0.61 0.13 -0.56 -3.59 -2.56 -2.76 -3.91 -4.02 -1.37 -3.04 -0.9 -5.0 -1.73 0.71 1.34
-3.21 -0.52 0.15 0.66 0.74 0.67 0.32 -0.04 0.17 0.04 0.18 0.18 -2.43 0.46 -0.18 0.17 -0.95 -0.58 -0.47 -0.65 -1.67 -0.02 0.12 0.79 0.39 0.07
0.79 1.57 1.58 1.57 1.23 0.22 -0.59 -0.06 -0.78 -1.68 -1.09 -0.6 0.71 -2.62 -1.09 -2.59 -0.58 -0.04 -0.61 0.69 -6.52 -2.16 -2.92 -2.95 -0.66 -0.5
1.01 0.7 0.45 0.88 0.42 0.26 0.21 0.44 -0.66 -0.59 -0.32 -0.54 0.57 -0.96 -0.85 -0.53 -1.46 -0.41 -0.48 -0.75 -4.33 0.94 -1.84 0.65 -0.23 -0.07
0.76 1.01 1.1 1.39 1.12 0.13 -1.24 -0.87 -1.32 -1.14 -0.35 0.24 0.58 -3.92 -3.03 -4.1 -1.97 -1.15 -1.74 -0.43 -1.63 1.19 -1.09 0.64 0.33 0.13
0.16 0.45 0.36 0.71 1.05 0.58 0.39 0.27 0.25 -0.06 0.04 -0.32 -0.84 -0.36 -0.55 -0.4 -0.57 -0.39 -0.36 -0.46 -3.75 -0.78 -0.41 0.41 -0.02 0.11
-3.7 -0.58 0.56 1.14 1.51 1.41 0.67 0.25 -0.22 -0.71 -1.05 -1.13 -3.17 0.58 -0.17 0.36 -0.02 -0.55 -0.72 -0.24 -3.62 -0.47 -1.02 -1.04 -0.08 0.32
-0.18 0.19 0.15 1.18 0.93 -0.21 -0.35 -0.18 -0.93 -0.75 -0.37 -0.6 -0.2 0.44 -0.73 0.52 -0.33 -0.56 -0.96 -0.8 -1.28 0.61 -0.17 -0.67 1.27 -0.14
-0.82 -0.27 0.3 0.53 0.54 0.18 -0.01 -0.04 0.06 0.12 0.21 0.16 -0.73 0.23 -0.36 -0.01 0.04 -0.06 -0.59 -0.15 -1.44 -0.05 -0.49 -0.14 0.16 0.84
-0.7 0.7 0.76 0.52 0.73 0.41 0.6 0.29 0.09 -0.15 -0.35 -0.59 -0.25 -0.78 0.65 -1.15 0.65 0.23 0.32 -0.11 -6.89 0.68 -6.47 -2.05 -0.63 -0.62
0.13 0.72 1.21 1.39 1.22 0.39 -0.72 -0.58 -0.95 -1.02 -0.46 0.04 0.03 -1.65 -0.62 -1.93 -0.53 -0.94 -0.85 0.28 -3.34 1.13 -1.78 -0.3 -0.15 0.15
-0.45 0.65 0.75 1.02 0.83 0.53 0.3 0.29 -0.35 0.41 0.49 0.61 -0.07 -2.19 -1.73 -1.93 -0.19 0.15 -0.45 0.47 -3.97 -0.11 -2.37 -0.46 -0.41 -0.38

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.