Heatmap: Cluster_296 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light - ZT1
Light - ZT3
Light - ZT5
Light - ZT7
Light - ZT9
Light - ZT11
Light - ZT13
Light - ZT15
Dark - ZT17
Dark - ZT19
Dark - ZT21
Dark - ZT23
Light - ZT25
Nutrient stress - Low nitrogen - 10%
Nutrient stress - Low phosphate - 0%
Nutrient stress - Low sulfate - 2%
Nutrient stress - Low micronutrients - 0%
Nutrient stress - NaCl - 75 mM
Nutrient stress - Mannitol - 100 mM
Nutrient stress - Control
Environmental stress - Prolonged darkness - 72h
Environmental stress - Cold - 4C
Environmental stress - Heat - 37C
Environmental stress - Control
Environmental stress - High light - 150 uE
Environmental stress - Control high light - 40 uE
0.35 -0.99 -0.49 0.11 0.69 -1.22 0.84 -0.08 -0.64 -0.33 0.29 0.04 -0.35 0.68 -0.22 0.53 -0.27 0.79 0.11 -0.27 -5.54 -0.24 0.8 -0.33 -1.23 -0.06
0.43 0.22 -0.23 -0.34 0.37 -0.69 -0.09 -0.4 0.21 0.1 0.67 0.56 0.1 0.63 -0.12 0.42 -0.4 0.14 0.26 -0.13 -2.05 -2.63 0.84 -1.23 -0.95 -0.06
0.26 -0.36 0.17 -0.19 0.59 0.26 1.04 1.01 0.38 0.28 -0.87 -0.03 -1.18 -0.11 -0.72 -0.57 -1.69 0.56 0.78 -0.14 -5.02 -4.43 0.99 -1.04 -0.77 0.01

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.