Heatmap: Cluster_155 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light - ZT1
Light - ZT3
Light - ZT5
Light - ZT7
Light - ZT9
Light - ZT11
Light - ZT13
Light - ZT15
Dark - ZT17
Dark - ZT19
Dark - ZT21
Dark - ZT23
Light - ZT25
Nutrient stress - Low nitrogen - 10%
Nutrient stress - Low phosphate - 0%
Nutrient stress - Low sulfate - 2%
Nutrient stress - Low micronutrients - 0%
Nutrient stress - NaCl - 75 mM
Nutrient stress - Mannitol - 100 mM
Nutrient stress - Control
Environmental stress - Prolonged darkness - 72h
Environmental stress - Cold - 4C
Environmental stress - Heat - 37C
Environmental stress - Control
Environmental stress - High light - 150 uE
Environmental stress - Control high light - 40 uE
-1.86 -1.6 -1.57 -1.14 -0.51 -0.03 0.61 0.69 0.5 0.35 -0.4 -0.88 -1.9 -0.57 -0.8 -0.59 -0.14 1.56 0.44 0.05 0.49 -0.56 1.04 -0.09 0.31 0.08
-0.53 -0.79 -1.38 -1.03 -1.05 -1.46 -0.78 -0.43 -0.35 -0.21 -0.0 -0.11 -0.04 0.47 -0.11 0.62 -0.6 1.75 -0.21 -1.2 0.7 0.65 0.88 0.48 -0.14 -0.65
-0.1 -1.08 -1.68 -0.74 -0.55 -1.1 -0.55 -0.34 -0.1 0.11 0.23 -0.08 0.29 0.16 -0.68 0.05 -1.09 1.69 -0.29 -1.59 0.72 0.86 0.62 0.23 0.16 -0.33
-0.63 -0.95 -1.2 -0.83 -0.88 -1.37 -0.42 -0.3 0.02 0.19 0.38 0.15 -0.48 0.26 -0.66 0.31 -0.86 1.94 -0.25 -1.24 0.52 0.2 0.45 0.77 0.11 -0.68
0.72 1.01 -1.0 1.37 -1.3 -0.76 -0.55 -1.12 -1.02 0.46 2.0 -0.89 1.28 -0.66 -0.09 -0.86 - 2.11 - -1.38 - -0.33 - - -0.65 -
-1.19 -0.11 -0.33 -0.9 -0.83 0.66 1.09 -0.12 -0.44 0.64 0.25 -0.17 -1.61 1.36 -1.83 1.27 0.19 1.37 0.79 -1.49 -1.01 -2.67 -1.86 -1.67 -1.08 -0.65
- - - 0.68 0.5 0.5 - 1.55 0.59 - 2.58 - - 1.55 - - - 2.52 0.59 - - - - - -0.02 -
-4.52 -5.24 -5.95 -5.8 -5.11 -5.94 -6.14 -5.99 -5.43 -5.02 -5.11 -4.75 -5.36 -6.37 -3.87 -4.78 -1.58 2.25 -1.01 -2.17 -0.01 2.12 1.87 2.28 1.74 1.36
-5.37 -6.2 -6.25 -7.9 -6.94 -8.01 -8.47 -6.34 -7.28 -4.59 -4.5 -4.82 -6.48 -5.63 -2.56 -4.43 -0.4 3.06 -0.14 -1.35 -3.69 1.35 0.39 1.63 1.78 2.24
- - - - - - - - - - - - - - - - - 4.12 - - - - - - 3.11 -
0.55 0.29 0.04 0.2 0.21 0.03 0.45 0.23 0.16 0.33 -0.04 0.11 0.46 0.22 0.07 0.22 0.24 1.05 0.31 0.38 -6.72 -3.85 -2.06 -1.3 -1.68 -1.34
- - - - - - - - - - - - - - - - - 3.84 - - - 2.7 - - - 2.37
- - - - - - - - - - - - - - - - - 4.7 - - - - - - - -
0.89 - 0.57 1.15 0.19 - -1.49 -0.44 -0.44 0.98 2.57 1.77 1.46 - - -1.6 -0.41 -2.24 -0.7 -0.27 -2.43 - - - -2.11 -2.0
0.82 0.68 0.05 0.01 -0.17 -0.87 -0.5 -0.77 0.13 0.22 0.21 0.45 0.64 0.04 0.04 -0.25 -0.33 1.53 0.12 -0.38 -3.98 -5.21 0.17 0.24 -2.87 -0.85
0.08 -0.21 -0.26 -0.12 -1.31 -2.14 -0.79 0.29 0.37 0.8 0.98 0.58 -0.28 -0.04 -0.69 0.05 -1.3 0.95 -0.5 -0.87 -0.77 -0.64 0.72 0.36 0.28 -0.02
0.07 0.09 -0.31 -0.48 -1.31 -1.28 -0.37 -0.01 0.27 0.66 0.65 1.12 0.81 -0.16 -0.26 0.28 -0.53 1.07 0.34 0.0 -3.61 -1.95 -0.17 -0.24 -0.75 -0.29
0.84 0.7 0.77 0.92 0.84 -0.15 -0.62 -1.02 -1.04 -1.0 -0.8 -0.51 0.97 -1.68 -0.93 -1.53 -0.69 1.08 0.42 -0.23 -2.44 -0.22 0.56 0.09 -0.69 -0.67
0.67 -0.45 - 0.93 - - 1.18 -0.14 1.03 - -0.06 - - -0.61 - - -0.06 1.7 - 0.89 -1.01 2.04 - 1.58 -0.7 -0.53
- - - - - - - - - - - - - - - - - 3.74 - - - - - - 3.66 -
- - - - - - - - - - - - - 2.66 1.41 2.13 - 3.51 -1.18 - -0.22 - - - - -
-0.6 -0.67 -0.37 -0.1 0.34 -0.21 0.45 0.17 0.26 0.19 0.22 0.03 -0.16 0.06 0.14 0.43 0.07 0.88 0.23 -0.17 -1.43 -0.91 0.15 0.07 -0.47 -0.44
-0.23 0.29 0.35 -3.45 -0.32 -1.21 -1.29 0.64 0.66 -0.16 0.83 0.69 -0.17 0.74 -1.9 -2.38 -3.43 0.84 0.06 -1.73 -0.82 -0.33 1.32 0.14 -0.73 0.75
1.45 - -0.76 0.68 -0.18 -0.03 -0.78 -1.1 -0.94 0.48 - -0.88 - -0.64 -1.24 - - 2.26 - 0.28 1.57 - -1.36 1.47 1.34 -
-1.08 -0.52 -0.34 -0.21 -0.14 -0.48 -0.06 -0.01 -0.18 0.11 0.12 0.16 -0.54 -0.63 0.09 0.0 -0.49 1.28 0.61 -0.02 0.62 -0.28 0.27 0.14 0.03 -0.54
- - - - 2.3 - - - - - - - - - 2.35 - 2.57 - - - 2.64 - - - 1.93 -
- - - - - - - - - - - - - - - - - - - - - - - - - -
0.81 - - 1.19 - - 1.32 - - - - - - - 1.02 - - 2.01 - 1.92 - 1.86 - 1.72 1.44 -
- - - - - - - - - 2.87 2.91 2.02 1.94 - - - - -0.89 - - - - -0.67 - - 1.07
0.47 -0.17 -0.97 -0.42 -0.46 -0.57 0.04 0.31 0.24 0.26 0.58 0.02 0.41 0.18 -0.19 0.24 -0.98 1.14 -0.09 -0.72 -0.94 -0.46 0.33 0.5 -0.8 -0.66
0.82 -1.49 -1.99 0.24 -0.06 -2.66 -0.31 0.07 0.81 0.61 1.04 -0.31 0.63 -0.15 -1.48 -0.39 -2.08 1.26 -0.4 -1.04 -0.96 0.61 -0.37 -0.93 0.68 -0.1
0.14 -0.76 -1.49 -0.11 -0.05 -0.71 0.14 0.25 0.3 0.14 0.75 -0.19 0.16 0.05 -0.38 -0.08 -1.36 1.31 -0.25 -1.02 -1.04 0.19 0.61 0.48 0.17 -0.9
-1.17 -2.82 -1.92 -1.86 -1.59 -1.4 -0.74 -0.46 -0.26 1.34 1.37 1.08 -0.52 -1.23 0.96 -3.79 1.07 2.11 0.2 0.26 -4.31 -2.73 -0.69 -0.44 -0.96 -0.35
-0.45 0.21 -1.52 0.15 -0.03 0.56 0.54 1.29 0.49 1.71 0.04 -0.43 - -0.1 - - - 1.12 -0.72 0.15 - -1.77 1.94 - -0.13 -
0.75 - -0.39 - - 1.29 - - -0.34 - - - - 1.93 1.11 - -0.16 2.32 -0.74 -0.47 - - - 1.22 1.41 1.11
- -4.48 -3.5 -4.54 -2.68 -0.96 -2.18 -1.41 -1.45 -0.83 -0.39 -0.31 - 1.51 0.25 2.01 -3.4 2.67 0.05 -0.35 -1.71 -2.57 - -1.73 0.98 1.56
- - 0.2 0.15 -0.1 - 1.79 - - 0.08 0.13 - - - 0.11 - - 2.55 1.67 -0.13 - -0.06 0.54 - 1.11 0.69
0.28 -0.43 -0.86 0.04 -0.26 -0.91 -0.45 -0.23 -0.24 0.17 0.47 0.31 0.39 0.25 0.03 1.09 -0.26 1.18 -0.12 -1.07 -0.97 -0.44 -0.38 0.29 -0.29 -0.49
0.45 -0.13 -0.07 -0.08 0.11 0.01 0.3 -0.11 0.05 0.2 -0.06 0.28 0.5 -0.41 -0.56 0.64 0.27 0.98 -0.05 0.3 -1.19 -2.53 -0.47 -0.88 -0.2 -0.5
0.38 -0.18 -0.73 0.28 1.25 -0.64 0.31 -2.11 0.95 0.17 0.45 -1.23 1.05 - -2.41 - -2.09 1.94 - - -0.14 1.18 -1.2 -0.71 0.5 -0.51
-1.13 -1.34 -1.81 -1.81 -1.36 -1.22 -0.84 -0.41 0.02 0.73 0.98 0.83 -0.65 0.72 1.46 0.55 -0.41 1.44 -0.63 -0.85 -0.55 -1.07 0.78 0.37 -1.68 -1.39
-0.59 -1.09 -1.93 -0.59 -0.7 -1.88 -1.13 -0.67 -0.76 -0.42 0.02 -0.72 -0.58 0.19 -0.2 1.04 -0.51 1.77 -0.11 -1.11 0.17 0.99 1.06 0.54 0.29 -0.17
-1.08 - -1.33 - - -1.42 -0.33 -0.16 -0.95 0.35 -0.0 0.71 0.29 1.23 1.11 0.84 0.2 1.68 0.56 0.03 -1.96 -1.32 1.19 -1.95 -2.17 -0.26
-1.3 -0.99 -0.76 -0.62 -0.53 -0.45 -0.21 -0.15 -0.19 -0.31 -0.26 -0.47 -1.17 -0.01 0.85 0.11 0.16 1.6 0.18 -0.45 -0.12 -0.26 0.73 0.97 -0.1 -0.37
- - 0.7 0.65 - - - - 1.74 - - 1.79 - 1.65 - 1.63 - 3.03 0.69 - - - - - - -
-1.42 -1.21 -2.67 -0.18 -1.41 0.83 1.01 1.8 1.09 -0.95 -0.87 -3.8 -0.16 -0.0 -0.71 -0.58 - 0.77 -1.09 -0.01 0.66 0.93 -1.21 0.3 0.09 -0.51
-1.3 -1.71 -2.23 -1.95 -1.84 -1.76 -1.49 -1.42 -0.92 -0.16 -0.17 -0.41 -1.03 0.89 0.55 1.07 -0.41 2.67 0.72 -0.27 -0.47 -1.7 1.24 -1.33 -1.04 -0.6
-0.11 0.48 -0.51 0.47 0.27 -0.87 -0.51 0.6 0.74 1.03 0.39 0.39 0.09 -0.66 -2.05 - -0.53 2.86 -3.23 -1.24 -1.55 -2.28 -3.02 - - -2.3
-0.91 1.35 - -1.77 1.19 - - - 0.54 - -0.86 0.83 0.48 -2.43 -0.1 0.69 - 2.66 -0.49 -1.2 - - 2.15 - -0.9 -
-1.34 - - -0.64 -2.43 - - -0.41 -0.03 1.0 1.69 0.93 -0.76 -0.42 0.5 -0.27 -0.03 1.81 0.11 0.51 -3.56 -0.34 0.74 -2.02 0.9 -0.57
-0.59 -2.34 -0.84 -1.87 -2.88 -4.14 -2.64 -0.01 0.57 1.33 1.46 1.21 0.4 0.09 0.21 0.13 1.09 1.38 0.04 0.44 -4.5 -2.78 -3.34 -0.74 -0.97 -0.44
-0.66 -2.43 -1.06 -0.7 -2.68 -3.45 -2.34 0.28 0.17 1.6 1.79 1.49 0.1 -0.3 -0.24 -0.74 0.12 1.07 0.17 0.04 -3.29 -2.43 -0.93 -0.18 -0.48 -0.1
-0.0 -0.1 -0.95 -0.83 -0.3 -0.11 0.33 0.57 0.35 0.55 0.55 0.13 0.26 -1.01 -1.1 -0.81 -0.46 1.2 -0.13 -0.67 0.33 0.47 -0.07 -0.08 -0.59 -0.54
-0.94 - -0.07 -1.12 -0.88 - 1.1 0.14 -0.09 -1.12 - 1.03 0.09 0.46 1.13 0.57 - 2.64 -0.43 -1.4 -0.52 -1.47 1.01 - -1.75 -
0.79 - 0.02 0.38 -0.74 -0.16 -0.77 0.46 -1.07 - 0.9 -1.55 1.02 0.28 - - - 1.93 1.12 -1.33 0.3 1.11 0.21 -0.45 -0.14 -
- - - - - - - - - - - - - - - - - - - - - - - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.