Heatmap: Cluster_241 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light - ZT1
Light - ZT3
Light - ZT5
Light - ZT7
Light - ZT9
Light - ZT11
Light - ZT13
Light - ZT15
Dark - ZT17
Dark - ZT19
Dark - ZT21
Dark - ZT23
Light - ZT25
Nutrient stress - Low nitrogen - 10%
Nutrient stress - Low phosphate - 0%
Nutrient stress - Low sulfate - 2%
Nutrient stress - Low micronutrients - 0%
Nutrient stress - NaCl - 75 mM
Nutrient stress - Mannitol - 100 mM
Nutrient stress - Control
Environmental stress - Prolonged darkness - 72h
Environmental stress - Cold - 4C
Environmental stress - Heat - 37C
Environmental stress - Control
Environmental stress - High light - 150 uE
Environmental stress - Control high light - 40 uE
-0.14 0.09 -1.12 -0.6 -0.06 0.13 0.42 0.12 0.38 0.11 -0.06 0.38 0.06 -0.71 -0.84 -1.05 -1.58 0.18 -0.34 -0.67 0.18 0.36 1.34 0.97 -0.64 -0.6
0.42 -0.29 -1.28 -1.01 -1.13 -0.27 -0.5 0.15 -1.38 0.18 0.64 0.01 0.27 -1.56 -1.97 -0.48 -1.37 0.65 -0.87 -1.57 -0.06 0.13 1.7 1.66 -0.21 0.11

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.