Heatmap: Cluster_137 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light - ZT1
Light - ZT3
Light - ZT5
Light - ZT7
Light - ZT9
Light - ZT11
Light - ZT13
Light - ZT15
Dark - ZT17
Dark - ZT19
Dark - ZT21
Dark - ZT23
Light - ZT25
Nutrient stress - Low nitrogen - 10%
Nutrient stress - Low phosphate - 0%
Nutrient stress - Low sulfate - 2%
Nutrient stress - Low micronutrients - 0%
Nutrient stress - NaCl - 75 mM
Nutrient stress - Mannitol - 100 mM
Nutrient stress - Control
Environmental stress - Prolonged darkness - 72h
Environmental stress - Cold - 4C
Environmental stress - Heat - 37C
Environmental stress - Control
Environmental stress - High light - 150 uE
Environmental stress - Control high light - 40 uE
- - - - - - - - - - - - - - - - - - - - - - - - - 4.7
- - - - 4.7 - - - - - - - - - - - - - - - - - - - - -
0.85 0.65 -0.28 1.67 1.26 0.26 -1.12 0.24 -0.58 -0.45 -1.05 -0.77 0.57 -0.76 -0.01 0.07 -1.38 -0.04 -0.07 -1.0 -1.37 -1.41 0.08 -0.93 0.22 -1.05
0.16 0.11 0.24 0.46 0.74 0.51 0.09 -0.23 -0.23 0.05 -0.17 -0.16 0.14 -0.09 0.45 0.36 -0.17 0.19 0.4 0.21 -2.11 -0.76 -0.96 -0.51 -0.71 -0.48
1.19 0.41 -2.33 2.23 1.3 -0.63 -0.18 -0.53 -1.46 -1.22 -0.3 -1.35 -0.59 1.02 -0.4 1.34 -0.73 -1.1 -0.19 -1.18 -2.27 -3.84 -1.67 -0.96 -2.09 0.16
- 0.48 1.6 2.44 1.75 1.93 0.62 -3.49 -2.52 -3.62 -3.54 -2.42 - -2.39 - - -3.28 -1.85 -0.11 1.95 -0.36 -0.85 - -3.09 - -
-2.54 -0.16 1.0 1.53 2.07 2.05 1.95 1.76 0.95 0.07 -1.21 -2.25 -3.2 - -9.85 - - - -9.12 -9.14 -7.22 -4.47 -5.46 -1.83 -1.4 -9.34
0.48 2.12 0.91 2.21 1.69 1.28 0.11 0.52 0.49 -0.07 0.02 -0.45 0.34 - - - - - - - - - - - - -2.06
1.98 1.28 -0.2 2.53 1.97 1.39 -0.2 -0.14 - - - - -1.31 1.91 - - -0.97 - - - - - - - - -
0.89 1.03 - 1.92 1.95 1.91 - 0.92 - - - - 0.79 - - - - - 0.89 0.52 - - 1.92 - - -
-4.95 0.15 0.61 2.36 2.62 1.87 1.52 0.13 -1.32 -2.4 -4.37 -4.78 -2.33 -4.35 -2.82 -4.16 -3.13 -2.18 -2.54 -1.45 -0.36 -2.34 -1.89 -3.96 -0.01 -2.91
-1.65 -0.88 -0.87 0.39 1.01 0.99 0.85 0.54 -0.01 0.22 -0.42 -0.47 -1.4 0.34 0.21 0.3 -0.87 0.35 0.06 -0.21 -0.7 -2.25 0.66 -0.65 -0.7 -0.03
- - - - - - - - - - - - - - - - - - - - - - - - - -
-2.85 0.53 0.45 1.86 2.26 1.13 0.57 -1.1 -1.37 - -1.88 -3.75 -2.65 -1.32 -0.95 -0.74 -3.87 -0.75 -0.17 0.6 0.99 -1.43 0.5 -3.94 -2.29 -0.05
- -2.42 1.2 2.0 2.74 2.55 2.01 0.34 -1.88 -2.74 - - - - - - - -4.58 -3.3 -0.23 - -1.92 - - - -
-4.12 -0.75 1.04 1.38 1.52 1.0 0.84 0.17 -0.39 -0.48 -0.18 -0.94 -2.64 0.58 0.23 0.02 -0.09 -0.37 -0.04 0.26 -4.62 -2.06 -2.68 -0.59 -1.58 -0.23
-2.61 0.58 0.72 0.49 1.56 1.98 2.23 1.73 1.58 0.59 0.01 -0.95 -2.08 -9.26 -8.7 - - -8.77 -6.9 -8.83 -6.27 -8.86 - -5.2 -4.32 -9.11
- - - - 4.05 - - - - - - 3.24 - - - - - - - - - - - - - -
1.42 0.46 0.37 1.27 1.71 1.51 0.88 0.76 0.75 0.35 0.28 0.67 0.82 - - - - -2.8 - - -4.07 -1.94 -3.79 - -2.78 -1.34
- 1.98 - - 3.63 - - - - - - - - 2.73 1.63 - - - - - - - - - - -
-0.73 0.19 -0.08 0.93 1.47 1.4 1.79 0.96 0.98 0.63 -0.65 -1.13 -1.98 -2.86 0.23 -0.84 -1.59 -1.33 -0.84 -0.86 -4.87 -3.02 -0.32 -3.18 -0.83 -1.36
-0.49 0.93 1.15 1.05 1.46 1.58 1.35 1.36 0.55 1.15 1.01 0.55 -0.66 - - - - - - -1.88 -2.54 - - - - -
0.5 1.43 -1.38 1.4 1.19 0.76 0.42 0.4 1.84 0.63 0.86 1.04 -0.49 - -1.54 - - -1.53 -2.45 -0.72 - -0.18 - - -2.47 -
- - -1.79 - 4.2 - -1.59 - - -1.88 - - - - - - - -2.38 -0.23 - - -0.73 2.15 - -0.62 -
1.88 - - 1.11 2.72 1.05 - - 1.16 - - - 0.93 0.45 - - - - - 2.24 - - 0.37 - - -
- - - - 3.92 - - - - - - - - - - - - 3.44 - - - - - - - -
- -0.93 -0.59 0.7 2.78 2.3 2.27 1.78 0.45 -4.67 -3.07 -3.49 - -3.94 - - -2.8 -2.55 -3.35 - - -4.84 -3.14 -0.39 -3.67 -4.0
-3.12 -0.77 0.12 -0.31 2.1 2.0 2.04 0.75 0.15 -3.15 -2.46 -2.96 - -3.41 - - - -2.34 -1.99 - -1.16 -3.45 - 0.55 2.35 -2.97
0.7 0.35 -0.13 1.37 0.32 0.33 0.35 0.57 0.38 -0.51 0.24 0.47 0.72 -0.19 -0.28 0.93 -2.79 -0.87 -1.06 -2.61 -4.54 -2.27 0.26 -0.49 -0.7 -1.3
- - - - 4.05 3.24 - - - - - - - - - - - - - - - - - - - -
-0.18 -0.39 1.11 1.53 2.12 1.48 0.75 -0.75 -1.24 -3.67 -0.43 -0.46 -1.38 -4.14 -0.47 0.15 -3.33 -0.14 -0.53 0.44 -0.28 -1.81 -0.04 -1.16 -4.23 -
- -0.6 0.38 -0.78 2.16 2.02 - 0.38 -0.69 - - 0.36 - - -0.99 - - 1.48 -1.09 0.18 1.62 -0.99 0.29 - -1.35 0.69
-3.82 -0.48 -0.36 1.85 2.97 1.95 1.31 0.79 -0.81 -1.07 - -1.98 -4.49 - -2.65 -3.12 -2.23 -0.56 -1.66 -1.29 -0.82 -3.81 -0.35 -2.64 -5.56 -3.77
- 1.12 - 1.49 2.66 - 1.55 1.75 - - - 1.63 - - - - - - 2.41 - - - - - - -
-2.08 0.04 1.13 1.42 1.76 1.48 0.48 -0.76 -0.93 -1.51 -1.68 -1.91 -2.16 -0.69 -0.79 -1.04 -2.24 -0.8 -0.8 -0.42 0.76 -0.83 1.06 -0.13 -1.18 -0.89
-2.0 0.42 1.3 1.74 1.96 1.59 0.77 -0.83 -0.75 -1.88 -1.89 -1.87 -2.65 -0.97 -1.58 -1.68 -2.56 -1.17 -0.75 -0.12 0.56 -1.73 0.76 -1.18 -2.21 -1.16
-3.67 -0.32 1.44 1.74 2.04 1.47 0.81 -0.27 -0.21 -0.14 -0.35 -1.26 -3.62 -0.79 -1.63 -0.69 -1.24 0.11 -0.62 0.31 -1.95 -1.61 -2.09 -3.17 -1.07 -1.99
- - - - 1.38 - - - - 1.37 - - - - - - - 0.89 - 2.38 - 1.09 1.11 1.38 - 2.78
-2.67 -0.15 0.87 1.18 1.18 1.2 0.54 -0.71 -0.11 0.25 -0.98 -0.01 -2.6 0.67 0.33 0.48 -0.11 0.02 0.28 0.65 -3.84 -1.38 -3.42 -1.58 -2.09 -1.54
-2.68 0.18 1.76 2.37 2.43 2.11 1.32 -1.61 -1.99 -3.85 -3.78 -1.96 -5.86 -4.8 -2.6 -2.23 -3.94 -1.39 -1.37 0.01 -1.63 -2.73 -2.51 - -4.84 -4.64
-4.19 0.26 1.58 1.67 2.49 1.77 0.65 -2.02 -1.14 -1.95 -2.45 -3.43 -3.08 -2.8 -2.34 -2.3 -3.36 -1.67 -0.65 -0.77 1.27 -0.63 -0.78 -1.58 -3.76 -1.41
-2.27 -1.17 0.69 0.85 0.84 0.79 0.36 -0.12 0.08 0.0 -0.26 -0.46 -1.63 0.02 -0.68 -0.25 -0.68 -0.13 -0.16 0.07 0.5 -0.14 1.04 -0.94 -0.53 -0.5
-1.16 -0.46 -0.2 -0.15 0.67 0.66 0.71 0.26 -0.34 -0.36 -0.47 -0.26 -1.17 0.37 0.31 0.27 -0.25 0.45 0.36 -0.57 -0.64 -0.81 0.34 -0.57 0.54 -0.06
1.66 0.98 -0.51 1.65 0.08 0.63 0.5 1.44 -0.49 1.19 1.66 1.59 0.16 - - - - - - - - - - - - -
-3.57 -1.62 -0.27 1.16 1.02 1.14 0.54 -0.61 -1.49 -1.89 -2.16 -1.81 -5.28 0.73 0.76 0.34 -0.41 1.05 -0.01 0.39 0.4 -1.76 1.25 -1.28 -2.2 -0.65
- - 1.76 - 2.81 2.01 - - - - - - - - - - - - - - 2.09 - 1.1 2.37 - -
- - 1.57 2.47 2.85 - 0.46 - - 0.4 - - - - - - - -0.3 - 1.07 -0.49 - 0.94 1.05 - -
0.29 -0.21 -0.4 0.71 1.6 0.87 0.45 -0.07 -0.52 -0.6 -0.57 -0.32 0.58 -0.19 -1.24 0.13 -1.84 -2.54 -1.39 -2.01 1.21 0.68 0.75 -1.96 -1.43 -1.68
1.84 0.59 - 0.42 0.24 1.35 - 0.23 0.33 0.25 0.27 1.43 0.77 2.03 - - - -0.2 - - - - - - - 0.76
-1.35 0.41 -0.32 1.93 2.33 1.63 0.55 0.13 -1.08 -0.48 -0.39 0.39 -0.88 -1.43 -2.42 -0.22 -0.82 -1.91 -0.53 -0.67 -2.54 -3.56 -2.14 -1.18 -2.26 -1.11
- - - - - - - - - - - - - - - - - - - - - - - - - -
0.47 0.22 0.35 0.55 0.7 0.14 -0.4 -0.38 -0.88 -0.61 -0.41 -0.25 0.96 -1.03 -1.27 -0.91 0.7 -0.79 -1.37 -1.4 1.25 0.81 0.24 -0.15 -0.86 -0.86
-0.02 -1.13 0.51 2.11 2.76 1.91 1.18 0.55 - -1.82 -3.3 -2.21 0.6 - -3.56 -3.16 - -1.55 -1.08 0.53 - - - - - -
-3.19 -0.01 1.24 2.55 2.53 2.02 1.13 -0.21 -1.13 -2.46 -3.81 -4.67 - - -3.33 -4.8 - - -3.4 -0.93 0.87 -1.79 -2.89 - -5.39 -
- -1.18 1.42 1.86 1.62 2.49 1.34 0.24 -1.2 - -1.36 - -0.89 - -1.41 - - 0.33 - 1.01 - -0.58 -1.7 - - -0.19
0.09 0.99 1.31 2.25 1.34 0.26 0.14 -0.59 -1.87 -2.6 -0.71 -0.61 -0.68 -4.1 - -3.37 - -2.93 - -0.72 -0.26 -1.23 0.19 1.15 0.97 -1.22
0.86 -1.31 0.44 0.49 1.74 0.83 -1.35 -1.53 - -0.06 -0.55 -0.46 1.29 -2.14 - 0.53 - -2.1 - -1.93 1.69 1.75 0.17 - -2.17 -2.06
- 2.34 - - 3.26 2.45 - - - - - - - 2.55 - - - - - - - - - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.