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Heatmap: Cluster_79 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Light - ZT1
Light - ZT3
Light - ZT5
Light - ZT7
Light - ZT9
Light - ZT11
Light - ZT13
Light - ZT15
Dark - ZT17
Dark - ZT19
Dark - ZT21
Dark - ZT23
Light - ZT25
Nutrient stress - Low nitrogen - 10%
Nutrient stress - Low phosphate - 0%
Nutrient stress - Low sulfate - 2%
Nutrient stress - Low micronutrients - 0%
Nutrient stress - NaCl - 75 mM
Nutrient stress - Mannitol - 100 mM
Nutrient stress - Control
Environmental stress - Prolonged darkness - 72h
Environmental stress - Cold - 4C
Environmental stress - Heat - 37C
Environmental stress - Control
Environmental stress - High light - 150 uE
Environmental stress - Control high light - 40 uE
-0.46 -1.03 -1.36 -0.88 -1.07 -1.06 -0.12 0.07 -0.48 -0.75 -0.66 -0.81 -0.84 0.33 -0.67 0.35 -0.4 0.83 -0.96 -1.06 1.28 0.55 1.31 0.22 1.19 0.43
- -4.46 - - -3.85 - - - - - -4.08 -3.95 -3.64 0.77 0.36 -0.09 0.5 0.33 0.44 0.65 -0.18 -2.53 1.82 2.56 0.97 1.9
-1.75 -2.21 -3.11 -2.76 -2.49 -3.08 -2.07 -2.24 -1.87 -1.91 -1.75 -1.54 -2.95 1.22 0.87 0.35 0.0 1.07 0.89 0.89 -0.0 -1.12 -0.24 0.91 1.52 1.95
- - - - - - - - - - - - - -1.24 0.26 -0.76 -0.68 -1.2 - - 2.01 0.02 2.5 1.33 1.27 2.83
-0.66 -2.49 -2.15 -1.06 -1.55 -1.74 -1.65 -0.4 -1.16 -1.28 0.44 0.35 -0.34 0.35 -0.77 0.3 -1.11 0.28 0.33 0.4 0.35 0.3 -0.05 1.66 1.58 0.62
-1.12 -1.07 -0.8 -0.46 -0.51 -1.23 -0.88 -0.67 -0.87 -0.54 -0.4 -0.47 -0.8 0.3 0.28 0.87 -0.13 0.24 -0.15 -0.86 1.1 1.17 1.36 0.49 0.07 -0.08
-0.65 -1.28 -0.8 -0.15 -0.22 -0.54 -0.01 -0.04 0.02 0.32 0.41 0.26 -0.12 0.38 -0.7 -0.04 -0.43 -0.74 -0.87 -1.07 0.34 1.0 0.24 0.83 0.48 0.49
-0.99 -0.15 -2.0 0.02 -0.16 -0.7 0.37 0.19 -2.05 -1.51 -0.65 -0.32 -0.74 -1.72 -2.46 -1.87 -0.29 -2.12 -0.82 -0.69 -0.85 -0.69 2.23 -1.72 1.85 1.99
-0.02 -0.81 -1.53 0.47 -0.63 -0.45 -0.54 -0.81 0.15 -0.52 -0.56 -0.15 -0.19 -2.84 -1.98 -0.82 -1.88 -0.64 -1.84 -1.5 0.79 -1.09 1.88 0.23 1.12 2.03
-2.9 -3.36 -1.38 -0.61 -0.65 -0.88 -1.97 -1.97 -1.28 -1.16 -1.32 -1.23 -3.29 1.0 -0.03 0.54 0.18 0.3 0.2 0.25 1.37 -2.35 1.57 0.56 1.19 1.37
-0.43 -0.75 -0.79 -0.41 -0.27 -0.68 -0.12 0.06 -0.45 -0.16 -0.12 -0.43 -0.52 0.2 -0.23 0.15 -0.24 0.21 -0.04 -0.11 0.44 0.21 1.22 0.41 0.55 0.37
-0.8 -1.3 -1.18 -0.25 0.09 -0.61 -1.03 -0.8 -0.79 -0.42 -0.01 -0.46 -1.68 -1.95 -1.42 -2.34 -1.56 -1.56 -0.72 -0.32 0.97 0.46 1.8 1.63 0.93 1.52
-1.23 -1.67 -1.95 -2.2 -2.2 -3.09 -1.61 -1.26 -0.58 0.31 0.49 0.41 -1.14 -0.07 -0.19 -0.09 -0.07 0.27 -0.41 0.53 -1.45 -0.31 0.63 1.79 1.74 0.98
-1.68 -2.81 -2.95 -2.33 -2.45 -3.32 -2.72 -1.09 -0.55 -0.13 0.77 0.1 -1.54 -0.52 -0.56 -0.81 -0.61 0.52 -0.65 0.13 -0.87 -0.17 1.35 2.07 1.79 1.13
-0.69 -1.04 -1.34 -0.91 -0.99 -0.97 -1.2 -1.47 -0.79 -0.47 -0.4 0.06 -0.76 0.24 0.49 0.67 -0.45 0.64 0.23 0.37 0.26 -0.59 1.17 0.84 0.71 1.0
-0.23 -0.53 -1.12 -0.45 -0.41 -1.34 -0.61 -0.56 -0.8 -0.7 -0.43 -0.47 0.23 0.07 -0.35 0.61 -0.87 0.33 -0.25 -1.8 1.33 0.61 1.39 0.15 0.97 -0.13
-1.69 -2.95 -1.26 -4.92 -1.74 -0.86 -2.97 -0.88 -1.94 -1.62 -1.35 -2.09 -2.3 1.13 0.56 0.63 0.3 0.89 0.5 0.56 0.92 0.85 0.79 -0.1 1.47 0.9
-3.9 -6.09 -8.48 -7.46 -5.94 -6.07 -5.5 -5.22 -5.23 -4.1 -3.18 -3.18 -3.53 0.73 -0.02 2.32 0.82 -0.37 -0.88 -0.65 1.08 0.33 1.81 1.67 1.06 0.95
-3.03 -4.87 -4.78 -4.33 -4.0 -4.29 -3.68 -4.07 -3.96 -3.33 -3.17 -3.15 -3.04 0.85 0.14 2.39 1.01 0.19 -0.31 -0.53 0.9 -0.05 1.52 1.42 0.85 1.01
-2.29 -1.87 -1.45 -1.44 -2.48 -3.89 -1.97 -1.29 -0.68 -0.87 -1.2 -1.77 -1.88 0.15 0.59 -0.03 -0.83 1.12 0.43 0.14 0.16 -1.11 1.26 1.12 1.78 1.74
-1.52 -1.38 -1.2 -1.18 -1.73 -2.44 -1.38 -0.8 -0.36 -0.66 -0.74 -1.61 -1.74 0.44 0.99 0.26 -0.67 0.95 0.61 0.39 -0.16 -0.96 0.79 0.75 1.13 1.74
-0.45 -0.35 -0.5 -0.06 -0.02 -0.14 -0.01 -0.03 0.02 -0.27 -0.37 -0.37 -0.6 -0.04 -0.09 0.55 -0.34 0.15 -0.18 -0.42 0.56 0.38 0.95 0.1 0.23 0.08
0.41 -0.03 0.67 0.42 0.39 - -1.15 -0.4 0.11 -1.03 -0.64 -1.85 -0.64 - -2.19 - -1.73 -1.02 -3.3 -2.32 -2.61 1.0 1.46 1.59 1.69 1.4
-0.35 -0.49 -0.58 -0.04 -0.05 -0.39 -0.41 -0.2 -0.43 -0.02 0.12 -0.02 -0.04 -1.07 -1.74 -1.32 -0.19 -0.11 -1.16 -1.45 -0.96 0.73 1.13 0.86 1.18 1.32
- - - - - - - - - - - - - 0.74 -0.87 2.05 -0.82 -1.54 - - 1.74 -0.11 2.15 2.25 1.37 1.44
-0.1 -0.01 -0.07 -0.28 -0.76 -0.97 -0.48 -0.42 -1.27 -1.03 -1.1 -1.22 -0.24 0.75 -0.03 0.37 -0.43 -0.33 -0.39 -0.37 1.45 1.09 0.63 -0.3 0.51 0.5
-0.17 -0.19 -0.51 -0.34 -0.73 -0.71 -0.75 -0.35 -0.54 -0.22 -0.18 0.05 -0.12 0.32 0.3 0.17 -0.04 0.2 0.08 -0.41 0.12 -0.11 0.7 0.56 0.79 0.47
-1.25 -1.88 -0.63 -0.67 -0.88 -0.83 0.19 0.04 -0.53 0.13 0.13 -0.09 -0.8 0.52 -0.22 -0.14 0.04 -1.23 -0.65 -0.98 0.7 1.07 0.83 1.48 0.19 0.18
-2.05 -1.69 -1.3 -1.08 -0.66 -1.15 -1.1 -1.29 -1.66 -0.83 -0.9 -1.12 -1.32 0.73 -0.55 0.68 -0.36 -0.16 -0.11 0.07 1.08 0.23 1.28 1.29 1.23 1.15
0.05 -0.45 -0.64 -0.17 -0.44 -1.06 -0.47 -0.3 -0.55 -0.38 -0.14 -0.13 0.19 -0.13 -0.67 -0.39 -0.33 -0.3 -0.88 -0.85 0.54 1.4 0.97 0.11 0.92 0.59
-1.98 -1.13 -0.77 -0.58 0.13 -0.63 -0.03 -0.27 -0.32 0.15 -0.03 -0.37 -3.91 -0.78 -1.0 -0.51 -1.16 -0.17 -0.2 -0.16 -0.39 1.05 1.34 1.15 1.05 1.14
0.06 -0.58 -0.47 -0.26 -0.43 -0.74 -0.27 -0.14 -0.39 -0.22 -0.08 0.11 0.31 0.09 -0.41 0.47 -0.54 -0.17 -0.49 -0.66 0.34 1.16 0.56 0.11 0.43 0.32
- - - - - -2.7 -0.12 0.15 0.32 0.91 0.57 -1.62 -2.82 0.15 0.83 1.71 -1.0 0.7 0.92 -0.43 0.52 -3.11 1.21 0.85 -0.18 0.33
-0.36 -1.52 -0.61 -0.21 -0.09 0.71 0.53 0.07 0.15 0.21 0.24 0.31 0.28 0.57 -0.23 0.82 -0.37 -0.46 0.32 0.12 -0.2 -3.57 -0.17 -0.2 -1.6 0.47
-1.46 -0.96 -0.53 0.13 -0.44 -0.75 -0.29 0.12 -0.49 -0.07 -0.43 -0.8 -0.5 0.98 0.11 0.41 0.49 0.83 0.45 0.75 -1.68 -1.64 -0.25 -0.85 0.93 0.91
-0.34 -0.59 -0.3 0.05 -0.21 -0.77 -0.29 -0.45 -0.17 0.01 0.13 0.17 -0.31 0.11 0.14 -0.37 -0.34 0.52 0.29 -0.44 -1.02 -0.35 0.56 0.17 0.86 0.97
-2.62 -1.04 -2.39 -0.28 0.32 -0.29 -0.71 -0.4 -0.58 -0.06 -0.5 -0.37 -1.06 -2.0 -2.56 -1.67 -1.81 -0.12 -0.51 -2.86 1.9 1.72 -0.06 0.36 1.73 0.96
-0.45 0.1 -0.57 -1.91 -3.74 -1.82 -0.21 -0.23 -0.42 0.87 -0.49 0.49 -2.47 0.15 -1.13 -0.2 0.31 -0.49 0.39 -0.83 -1.1 -0.03 1.8 -0.61 1.22 1.09
-1.45 -2.54 -1.91 -0.18 -0.81 -0.54 0.06 -0.27 0.22 0.37 0.66 0.58 -1.08 0.02 -0.34 0.18 -0.25 -0.63 -1.14 -0.93 1.08 0.99 -0.15 0.87 0.89 0.13
- - - - -1.5 - -2.34 -0.12 -2.5 -0.66 -1.01 -2.46 - 0.18 -1.8 0.63 -0.9 0.1 -1.9 -0.52 1.88 1.14 2.22 0.37 1.06 1.84
-1.25 -1.28 -0.56 -0.21 -0.02 -0.26 -0.31 -0.78 -0.5 0.07 0.19 0.55 -0.77 0.67 -0.16 1.68 0.14 -0.31 -0.12 0.65 -4.6 -0.1 -2.62 0.47 -0.13 0.96
-1.45 -0.93 0.03 -1.83 -1.16 -2.16 -0.3 -1.73 -1.32 -1.18 -1.89 -0.08 -3.51 -0.28 0.2 2.59 -3.18 0.4 0.35 1.75 -2.85 -0.39 -0.12 0.88 -0.39 0.46
- -2.01 - - - -1.9 -1.69 - - 1.09 0.42 -1.04 - - 0.94 1.51 1.04 -0.16 -1.5 -1.52 -0.54 -0.86 1.96 1.76 0.38 1.58
-2.38 -1.59 -1.72 -1.89 -1.5 -2.06 -2.27 -1.91 -1.76 -1.35 -0.89 -0.84 -1.44 -0.84 -2.09 -1.92 -2.36 -0.92 -2.28 -2.32 1.77 2.22 0.65 1.87 2.13 0.86
-0.48 -0.7 -0.64 -0.46 -0.21 -0.39 -0.23 -0.28 -0.22 0.04 0.23 0.28 -0.01 -0.0 -0.87 -0.52 -0.92 -0.31 -0.75 -1.04 0.47 1.08 0.25 1.16 0.82 0.48
-0.75 - -4.89 -3.23 -2.65 -2.91 -1.97 -1.93 -1.88 0.04 0.91 0.32 -0.9 -1.77 0.05 1.37 0.54 -3.26 -2.81 -2.63 0.51 -0.54 1.71 2.08 0.99 1.08
-0.43 -5.23 -4.6 -3.54 -2.67 -1.77 -1.8 -1.73 -1.17 0.42 0.85 0.72 -0.31 -1.31 0.72 1.66 0.69 -3.1 -2.83 -3.03 -0.25 -0.88 1.35 1.55 0.8 1.15
-0.28 -0.53 -0.55 -0.39 -0.3 -0.23 -0.35 -0.31 -0.24 -0.25 -0.21 -0.17 -0.4 0.17 0.09 1.01 -0.17 -0.46 -0.28 -0.39 0.7 0.65 0.42 0.21 0.34 0.3
0.17 -0.35 -0.5 -0.45 -1.11 -1.63 -0.75 -0.44 -1.19 -1.03 -0.8 -0.69 0.19 -0.58 -0.03 -0.04 -0.55 0.36 -0.43 -0.73 1.06 1.37 0.71 0.09 1.17 0.79
-1.71 -1.71 -1.71 -1.79 -1.79 -1.48 -2.1 -2.36 -1.55 -0.45 -0.41 -0.3 -2.11 -1.28 0.95 2.34 -0.32 0.45 -0.44 -0.07 0.2 -1.41 1.2 1.74 -0.27 0.67
-1.53 -1.33 -1.65 -2.37 -2.24 -3.03 -3.04 -1.48 -1.93 -2.83 -3.48 -3.33 -2.59 0.85 0.67 0.57 0.36 0.45 0.6 1.39 -0.95 1.49 -0.03 -0.19 1.44 1.85
0.1 -0.96 -1.03 -0.05 -1.89 -2.68 -0.94 -1.18 -1.1 0.81 0.73 0.72 -2.3 -3.28 -2.78 - -2.47 -0.88 -0.53 -1.06 -0.69 -3.09 1.8 1.05 1.69 2.06
-0.59 -0.53 0.06 -0.1 -1.22 -2.13 -1.19 -0.71 -1.15 -0.76 -0.54 -0.31 -0.15 1.0 0.78 0.98 -0.63 -0.13 -0.7 -1.03 1.46 -0.01 0.5 0.41 0.44 0.43
-1.92 -1.48 0.0 -0.43 -0.3 -0.03 -0.24 -0.42 0.31 0.42 -0.1 -0.37 -1.16 0.67 0.66 0.25 0.73 -0.74 0.54 0.81 -0.88 - 0.84 0.49 -0.1 0.03
-2.58 -2.8 - -3.32 -3.7 -4.39 - -4.19 - -4.45 - - - 1.72 0.71 0.8 0.17 -0.23 0.46 0.66 0.42 1.2 1.07 0.21 1.51 2.01
-0.36 -0.91 -0.67 -0.41 -0.43 -0.92 -0.81 -0.66 -0.5 -0.29 -0.06 -0.12 -0.25 0.52 0.1 -0.31 -0.57 -0.92 -0.43 -1.09 0.67 0.98 1.08 1.24 0.42 0.58
- - - - - - - - - - - - - - - - - - - - 3.09 2.02 0.15 2.42 1.2 2.23
-1.38 -2.17 -1.06 -0.59 -0.62 -1.26 0.52 0.36 0.52 0.43 0.03 -0.43 -1.25 0.81 0.13 0.85 0.22 0.38 0.43 0.28 0.26 -1.45 0.46 -0.26 -0.08 0.14
-0.73 -0.65 -1.41 -1.43 -1.05 -1.03 -0.7 -0.12 0.53 0.43 0.55 0.18 -1.23 -1.4 0.38 -1.3 -0.47 0.34 -0.29 -0.58 -0.31 -0.38 0.76 1.36 1.44 0.65
-0.46 -1.1 -0.59 -0.28 -0.52 -1.11 -0.47 -0.51 -0.77 -0.03 -0.21 -0.17 -0.32 0.29 -0.76 -0.13 -0.65 -0.44 -0.35 -0.32 0.68 -0.45 1.2 1.03 0.62 1.45
- - - - - - -5.58 - - - - - - 1.23 0.34 0.69 0.16 0.96 0.63 0.65 1.29 1.25 0.25 0.85 1.75 1.76
- - -6.39 -6.31 - -7.48 -6.94 - -7.34 -7.43 -7.38 - - 1.3 0.62 1.17 0.45 1.07 0.91 1.24 0.89 0.7 0.1 0.7 1.1 1.87
-4.26 -4.71 - -3.88 -3.12 - -4.95 - - - - -3.87 - 0.4 0.14 0.22 0.0 0.6 0.33 0.27 1.61 1.28 0.61 1.38 1.5 2.21
-0.79 -0.72 -0.6 -0.3 -0.59 -0.95 -0.4 -0.43 -0.38 -0.61 -0.32 0.03 -0.21 -0.08 -0.89 -0.74 -1.3 -0.24 -0.4 -1.35 0.57 1.53 0.77 0.95 1.37 0.55
-0.75 -0.38 -0.61 -0.24 0.1 0.2 0.34 0.48 -0.24 -0.72 0.46 0.07 -0.59 0.56 0.18 0.95 -0.69 0.04 0.65 0.1 -0.3 -3.21 0.32 -0.09 -0.07 -0.3
0.22 -0.14 -0.26 -0.25 -0.52 -1.12 -0.81 -0.79 -0.8 -0.69 -0.52 -0.38 0.17 0.41 0.08 0.47 -0.19 0.0 -0.02 -0.64 0.71 1.13 0.34 0.26 0.49 0.26
-0.32 -1.49 -1.66 -1.06 -1.26 -1.53 -1.29 -0.72 -1.06 -0.8 -0.43 -1.16 -0.57 0.07 -0.25 1.03 -1.18 -0.54 -0.63 -1.17 1.49 1.35 2.02 -0.21 0.72 0.31
-1.03 -3.72 -1.55 -0.63 -2.11 -2.28 - -3.41 -1.66 -2.41 -1.31 -0.88 -2.4 -2.3 -2.47 - - -2.84 -3.65 0.01 0.31 0.46 2.43 2.4 0.45 2.58
-1.15 -0.68 -0.7 -0.11 -0.25 -0.87 -0.38 -0.12 -0.19 -0.29 -0.07 -0.34 -1.06 0.11 0.36 0.58 -0.35 0.41 0.09 -0.76 0.88 0.6 1.08 0.2 0.19 0.0
-1.69 -1.98 -1.37 -0.98 -1.08 -0.88 -0.96 -1.29 -0.74 -1.0 -0.42 -0.67 -1.15 -0.45 0.59 2.42 0.02 0.31 0.29 0.48 -0.04 -0.51 0.44 1.16 -0.5 0.34
-4.39 -4.62 -3.88 -3.67 -3.53 -3.47 -3.18 -3.15 -3.24 -2.91 -3.58 -3.58 -4.27 1.37 0.55 0.94 -0.09 0.13 0.3 0.07 1.6 1.01 0.1 1.12 1.72 1.61
-2.95 -2.97 -2.1 -1.62 -1.57 -2.16 -1.16 -1.06 -0.92 -0.76 -0.99 -1.38 -2.87 0.85 -0.0 0.69 -0.21 0.48 -0.17 -0.19 1.49 0.94 0.57 0.93 1.38 1.26
-2.58 - - - - - -2.27 - -0.7 -2.39 -1.31 - - -1.86 - -0.29 - -1.33 - - 2.74 1.23 2.52 0.41 1.48 2.01
-0.15 -0.37 -0.47 -0.42 -0.02 0.03 0.48 0.28 0.26 0.27 0.15 -0.14 -0.38 0.3 0.0 0.39 0.01 0.12 0.29 0.22 -0.28 -1.91 -0.09 -0.05 -0.29 0.27
-1.0 -0.7 -0.73 -0.66 -0.41 -0.25 -0.15 -0.3 -0.34 -0.2 -0.35 -0.49 -0.88 -0.02 0.19 0.33 -0.06 0.46 -0.2 -0.05 0.9 -0.47 1.01 0.36 0.55 0.79
-0.83 -1.39 -2.7 -0.46 -0.53 -2.07 -0.92 -0.91 -1.01 -0.32 -0.03 -0.34 -0.49 0.76 -0.54 -0.29 -1.01 -0.72 -0.55 -0.99 0.9 1.26 0.83 1.37 1.25 0.95
-0.91 -1.14 -1.16 -0.53 -0.51 -0.82 -0.37 -0.28 -0.7 -0.65 -0.95 -1.18 -1.25 0.67 0.37 0.45 -0.41 0.54 -0.02 0.13 0.96 0.44 1.17 0.06 0.63 0.77
- -4.2 - -3.31 -2.91 -1.44 - -2.05 -3.34 -2.44 -3.36 -2.65 - -0.12 0.61 0.28 0.97 0.97 0.96 -0.4 0.83 -1.18 1.37 1.75 1.08 2.0
-0.84 -1.24 -1.12 -0.25 -0.72 -1.12 -0.16 -0.28 -0.7 -0.24 -0.19 0.01 -1.36 -0.14 -0.08 -0.44 -1.17 -0.17 0.2 -1.01 0.31 1.23 0.65 1.6 1.14 0.29
-0.78 -1.07 -1.01 -0.5 -0.8 -1.31 -0.81 -0.59 -1.13 -0.7 -1.03 -0.81 -0.87 0.12 -0.31 0.32 -0.69 0.54 -0.13 -0.05 0.32 -0.16 0.23 1.37 1.61 1.48
-0.74 -1.35 -0.95 -1.24 -0.63 -0.73 -0.67 -1.13 -0.56 -1.16 -1.53 -0.44 -1.68 0.33 0.06 0.94 -0.13 0.5 0.19 0.33 0.49 -0.55 0.72 0.96 0.97 1.39

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.