Heatmap: Cluster_184 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Roots (apex), 7 DAG
Roots (differentation zone), 4 DAP
Roots (elongation zone), 4 DAP
Roots (meristematic zone), 4 DAP
Roots (stele cells), 7 DAS
Roots (tip)
Leaves (rosette), 21 DAG
Leaves (rosette), 29 DAG
Leaves (rosette), 35 DAG
Leaves (rosette), 42 DAG
Leaves (rosette), 57 DAG
Epidermis cells
Mature guard cells
Stems (internode)
Stems (internode), senescent
Meristem (M1-3), 7-9 DAG
Meristem (M4-6), 1-12 DAG
Meristem (M7-1), 13-16 DAG
Axis of the inflorescence
Pedicel
Flowers (receptacles)
Flowers (floral buds)
Flowers (sepals)
Flowers (petals)
Flowers (stamen filaments)
Flowers (anthers)
Flowers (carpels)
Flowers (ovules)
Stigmatic tissues
Pollen
Siliques
Siliques, senescent
Pods of Siliques
Pods of Siliques, senescent
Embryo
Endosperm
Seeds, dry
Seeds, from senescent siliques
Seeds, young
Seeds, germinating
Seedlings, 5 DAG
Seedlings, 11 DAG
Seedlings, 14 DAG
Seedlings, etiolated
-3.49 -1.46 -2.46 -3.81 0.07 -3.52 -2.72 0.3 0.58 0.49 0.27 4.15 -1.24 -1.14 0.74 -1.48 -1.94 -1.65 -1.84 -2.22 -0.83 -2.12 -0.13 -0.31 -1.27 -0.54 -0.48 -1.05 -0.48 -4.56 -0.44 -0.3 -0.44 0.99 -3.36 -0.09 -0.16 0.15 -0.76 -1.79 -1.65 -3.81 -1.44 -1.15
-1.99 -2.71 -1.33 0.16 1.31 -0.59 -1.72 -1.15 0.01 0.29 0.1 4.46 -0.01 -0.97 -0.17 -2.02 -1.61 -0.98 -0.4 -0.97 -0.38 -1.27 -1.62 -3.43 -3.13 -2.85 -0.58 -1.4 -1.85 - -1.1 -3.37 -0.85 -0.92 -0.87 -2.3 -2.73 -3.41 -1.17 -1.05 -2.4 -0.97 -1.34 -2.1
- - - - - - - - -1.88 -4.68 -3.02 5.34 - - - - - -3.71 - - -4.69 - - - - -0.41 -5.51 - - - - - -5.02 -3.08 -0.45 -0.76 -0.4 - - - - - - -
-2.19 -2.7 -3.32 -1.07 -3.41 -1.98 -2.39 -3.0 -1.85 -1.87 -1.99 4.86 -0.56 -2.79 -1.97 -2.01 -1.53 -1.39 -1.44 -1.92 -1.94 -1.66 -2.59 -3.27 -2.18 2.04 -1.52 -1.56 -2.31 - -2.73 -1.89 -3.14 -0.25 -1.29 -1.21 -2.0 -2.82 -1.84 -1.78 -3.52 -1.99 -2.07 -3.14
AT1G11890 (SEC22)
0.43 -0.52 0.38 -0.07 1.62 0.43 -0.55 -1.37 -0.2 0.16 -0.36 3.03 -1.23 -0.31 -0.6 -0.56 -0.43 -0.5 -0.72 -0.98 -0.09 0.11 -0.8 -0.16 -0.07 -0.95 -0.5 -0.23 0.19 -1.74 -0.37 -2.49 -0.58 -0.57 -0.38 1.5 -3.45 -3.06 -0.18 -0.51 -1.21 -0.49 -0.52 -0.56
- - - - - - - - - - - 5.24 - - 0.84 - - - - - - - - - - - -2.86 - - - -1.53 - - - - 0.7 - - -0.03 - - - - 0.37
- - - - - - - - - - - 5.39 - - - - - - - - - - - - - 1.02 - - - - - - - - - - - - - - - - - -
0.23 1.21 0.01 -0.55 -0.07 -1.72 0.26 -1.17 -2.23 -3.32 -2.54 2.76 -0.64 2.25 -1.06 0.22 -1.13 -1.8 0.19 0.19 -0.09 0.15 0.37 0.54 0.13 -3.51 -0.57 -1.7 0.39 -8.13 0.41 -1.78 0.59 -0.69 -1.63 -5.48 -0.47 -2.64 -1.92 -0.28 -0.51 0.13 0.24 0.38
- - - -2.0 5.15 - - - - -4.01 - - - - 0.26 - -3.7 -1.07 -2.58 -2.56 - -1.55 - - - -0.84 -0.86 -0.25 - -1.46 -2.2 -1.66 - -2.73 -2.42 0.27 -0.05 - -1.62 - -3.6 - - -
AT1G34190 (NAC017)
-0.03 0.17 -0.1 -0.25 0.7 -0.54 -1.03 -0.34 0.39 0.59 0.53 2.03 -0.09 -0.8 0.06 -0.7 -0.5 -0.33 -0.64 -0.79 -0.07 0.0 -0.18 -0.28 -0.44 0.13 -0.11 0.3 0.18 -0.39 -0.49 -0.53 -0.51 0.46 -0.51 1.56 -0.79 -0.97 0.03 -0.52 -1.31 -0.61 -0.35 -0.05
-1.07 -2.96 -2.56 0.17 3.69 -0.23 -1.71 -3.7 -2.69 -3.28 -3.18 2.21 - -0.26 1.25 0.36 0.8 0.9 0.49 -0.28 -0.95 0.46 -1.46 -1.66 -1.32 -2.46 0.1 -0.03 -1.8 - -1.4 -2.91 -2.57 -2.89 0.49 0.27 -3.52 -2.28 -0.33 -0.23 -2.29 0.16 -1.99 -2.4
-3.06 -2.37 -2.01 -1.44 1.49 -1.8 -2.96 -2.85 -1.84 -2.09 -2.27 4.87 0.9 -1.38 -1.24 -3.23 -2.6 -2.21 -1.41 -1.68 -1.61 -1.37 -1.75 -0.82 -2.49 -3.32 -1.31 -1.94 -2.03 -10.0 -2.61 -2.15 -2.37 -2.43 -1.67 -1.87 -0.47 -3.65 -2.09 -2.77 -3.75 -2.74 -2.62 -2.84
- - - - - - - -2.41 -2.08 -0.8 -0.13 2.89 1.98 -3.0 -1.5 - - - - - -0.06 0.01 - -2.08 - 1.94 -3.41 - - 3.72 -2.83 -0.01 -5.1 1.91 - -3.91 2.32 -3.57 -0.95 -4.68 -2.81 - - -3.23
2.28 -1.47 0.14 -2.18 - -0.65 - -3.67 -3.44 -1.93 -2.0 3.45 - -4.34 -0.02 - - - - - -2.46 - - -2.86 -2.14 3.1 -3.94 - - -3.18 -4.17 -0.24 - 3.42 -4.18 -1.98 -0.56 -3.9 - -0.3 -3.77 - -2.6 0.25
-1.63 -3.71 -2.39 -1.01 -5.62 -1.2 -2.32 -3.25 -3.91 -5.15 -4.06 3.92 -3.5 0.71 3.33 -0.86 -0.46 -0.41 -1.23 -1.25 -1.19 -1.06 -2.17 -1.61 -1.99 -1.15 -0.29 0.01 -0.97 - -1.48 -3.01 -2.08 -4.27 -0.42 1.75 -3.58 -2.52 -0.14 -1.21 -2.66 -1.47 -1.11 -2.0
-0.2 -1.53 -0.09 0.24 -3.62 0.13 -1.09 -0.06 0.03 -0.32 -0.43 4.14 -1.63 -0.11 -0.0 -0.93 -0.62 -0.14 0.12 -0.05 -0.6 -1.81 -0.8 -1.17 -1.0 -2.95 -0.06 -0.25 -0.55 - -0.78 -2.92 -0.48 -2.64 -0.17 -1.89 -2.99 -2.76 -0.28 -0.69 -1.14 -2.14 -0.34 -0.95
0.73 -1.92 -0.65 2.07 - 0.86 -0.35 -0.78 -1.73 -2.3 -2.06 3.16 -2.32 -0.72 -0.0 -0.33 0.01 0.34 0.46 0.01 -0.14 -0.03 -1.23 -1.7 -1.71 -1.71 0.5 0.1 -0.5 -4.53 -1.23 -1.08 -1.76 -3.18 0.58 0.01 -2.09 -0.49 -0.06 0.26 -0.76 0.27 0.2 -0.29
- - - - - - - -0.07 -2.37 -2.18 -2.03 5.3 - - - - - - - - - - - - - 0.38 -0.25 - - - - - - - - -1.45 -0.9 - - - - - - -
-0.57 -0.76 -0.27 -0.27 1.31 -0.58 -0.89 0.0 0.87 1.11 1.36 2.49 -1.26 -0.11 1.01 -1.72 -1.75 -1.22 -0.31 -0.12 0.14 0.2 0.01 0.05 -0.4 -0.58 -0.32 -0.57 -0.26 -2.77 -0.69 -0.49 -0.59 1.11 -1.18 -1.23 -0.52 -0.86 -0.75 -0.34 -1.63 -0.56 -0.65 -0.7
- - - - - - - - -1.01 - -0.53 4.2 - 0.66 1.24 -1.97 -3.45 -2.62 - - - - - 0.45 - 2.81 - - - 3.28 - - - - - - - - -0.03 -1.87 - - - -0.8
- -4.13 -2.31 -2.84 4.7 -5.89 - - - -6.68 - 3.28 - -1.3 -0.58 -5.03 -5.09 -5.69 -5.0 - -1.76 -3.97 -4.33 - -3.75 1.09 -2.26 -3.99 -4.16 -3.26 -3.75 -4.09 -7.09 -0.46 -1.03 -0.96 0.48 - -2.85 - -4.9 - -2.93 -7.04
AT3G21070 (NADK1)
-0.72 1.74 0.31 -1.8 -1.77 -1.61 -2.67 -2.24 -0.09 -0.52 -0.71 4.54 0.61 -2.64 -1.0 -2.48 -2.46 -2.18 -2.68 -2.53 -0.47 -2.06 -1.83 -1.72 -2.55 -2.72 -1.52 -1.35 -1.2 -10.14 -1.35 -1.92 -1.54 -1.45 -0.99 0.27 -1.24 -2.1 -1.27 -1.02 -2.22 -2.12 -1.5 -1.35
AT3G23920 (BAM1)
-2.98 -2.28 -2.13 -2.87 1.53 -3.58 -2.11 -1.62 -0.1 0.09 -0.09 4.24 1.76 -1.2 0.14 -4.47 -4.43 -4.08 -3.17 -2.53 -0.71 -1.9 -1.31 -1.94 -3.27 0.1 -2.22 -2.28 -2.28 -1.74 -1.68 -0.12 -1.42 1.3 -2.41 -0.41 1.15 -0.76 -2.93 -2.17 -2.83 -3.36 -1.65 -2.57
-1.76 - - - - - -0.97 -4.69 -5.75 - - 4.66 - - - - - - - - -0.49 0.79 -1.21 -1.98 -1.48 -0.4 0.67 -0.23 - - -0.05 -4.04 -0.26 - - 0.61 1.23 -1.84 1.31 -0.27 -0.55 -1.24 -1.08 -1.83
-0.54 0.3 -0.45 -1.03 2.09 -1.06 -1.28 -0.85 1.34 1.18 1.38 3.32 0.16 -0.7 0.23 -1.21 -1.12 -1.18 -1.66 -1.61 -0.07 -0.96 -0.77 -0.92 -0.65 -1.88 -0.82 -1.2 -0.84 -3.89 -0.27 -1.36 -0.29 0.08 -1.33 -0.54 -2.91 -1.75 -1.55 -0.88 -0.85 -1.62 -0.66 -0.41
-2.64 -2.43 -2.45 -1.97 -6.11 -2.63 -0.11 -0.51 -0.37 -0.78 -0.94 4.01 1.73 -1.51 -0.69 -1.15 -0.9 -0.46 -0.26 -0.05 0.2 0.02 -0.59 -1.6 -1.69 -1.84 -0.35 -0.81 0.43 - -0.92 -2.05 -0.68 -1.15 0.35 -0.69 -1.52 -3.11 -1.02 -0.29 -1.15 0.59 -0.06 -0.38
-2.71 - - - - - - -1.15 -2.58 -2.17 -1.97 5.02 - -1.16 1.02 - - - -2.7 - - - -4.68 - -2.44 -5.58 -2.4 - - - -2.08 -3.98 -3.5 -0.85 -3.6 2.57 -4.23 - -6.31 -3.72 -4.56 -2.77 - -4.14
AT4G01950 (GPAT3)
-0.18 -1.63 -0.15 -1.98 - 0.22 -0.96 -1.74 2.02 2.07 1.53 4.01 0.55 -2.01 0.9 -4.26 -5.49 -6.61 -3.21 -2.05 -4.15 -4.15 -4.59 0.01 -6.12 -8.39 -2.49 -5.32 -5.87 - -2.18 -4.78 -2.46 -1.91 -6.7 -2.53 - -10.84 -6.57 -1.45 -0.98 -0.26 0.64 1.5
-4.74 -3.61 -3.1 -3.57 -2.86 -4.47 -2.87 -1.99 -2.01 -2.84 -2.6 4.86 1.11 -2.32 -1.84 -4.27 -4.45 -4.37 -2.44 -1.99 -1.81 -1.24 -2.61 -4.76 -3.9 -4.02 -2.39 -3.07 -3.46 -9.0 -2.62 -2.56 -1.22 -1.79 -2.96 2.35 0.01 -1.85 -2.89 -3.22 -2.64 -1.6 -1.94 -2.42
- - - - - - - - - 0.43 0.46 5.04 - - 0.53 - - - - - -0.25 - - - - -0.45 -2.24 - - - -2.7 - - - 1.52 0.34 - - - -0.35 - - - -2.49
0.86 1.93 0.97 -6.43 -2.53 -2.01 0.08 -2.5 -1.63 -1.95 -1.64 3.12 -1.25 -0.35 1.79 -2.01 -3.16 -4.37 -2.7 -0.48 0.15 -0.32 0.43 -1.59 -0.16 -2.69 -2.11 -2.74 -0.98 -8.93 -0.0 -1.2 0.53 2.05 -4.84 -2.43 -3.66 -4.06 -1.54 -0.46 -0.3 0.42 0.05 1.04
-1.78 -1.96 -2.13 -1.93 1.56 -2.34 -2.68 -2.25 -2.06 -2.27 -2.01 4.87 -1.22 -1.12 0.34 -1.84 -1.52 -1.35 -1.3 -1.76 -1.33 -1.82 -2.28 -1.52 -1.83 -2.06 -1.11 -1.29 -2.47 -10.51 -2.57 -3.74 -2.36 -0.96 -1.67 -1.71 -5.67 -5.15 -1.73 -2.98 -2.33 -2.41 -2.0 -2.08
AT4G25350 (SHB1)
1.85 0.26 1.44 -0.94 - -0.96 -2.45 -2.82 -0.51 -1.15 -1.24 4.38 -1.66 -4.04 -2.5 -1.84 -1.06 -0.52 -2.76 -1.47 -2.7 0.09 -1.74 -2.06 -5.71 -1.69 -1.46 -0.22 2.26 -3.44 -4.51 - -4.58 - -2.62 -4.78 - - -3.47 -2.1 -1.0 -1.57 -2.1 -1.56
0.47 - -0.24 -0.68 2.32 -0.41 - -2.12 -1.83 -2.68 -1.32 4.59 - - -0.34 -0.51 -0.81 -0.69 -1.25 -1.7 - - - 0.24 -1.59 -3.07 -1.67 - -1.31 - -3.33 -1.47 -1.24 -1.16 - 1.0 - - -2.59 -0.5 - - -1.51 -
-3.0 -1.67 -2.88 -4.18 -3.6 -3.48 -2.54 -1.54 1.82 1.09 1.31 4.41 0.84 -0.09 0.76 -4.85 -4.18 -4.08 -3.1 -3.0 -2.86 -2.57 -0.22 -0.81 -2.97 -2.58 -1.04 -3.22 -3.26 -5.04 -0.09 -3.06 -0.13 -1.18 -1.44 0.81 -4.7 -5.03 -2.76 -3.45 -3.02 -2.8 -1.17 -3.08
- - - - - - - - 0.08 - 0.08 4.82 - 1.73 - 1.87 - - - - - - - - - - - - - - -3.41 - - - - 1.73 - - 0.42 - - - - 0.89
- -4.36 - - 4.54 - -4.7 -6.89 -8.47 -5.13 -7.04 4.05 -1.97 -2.11 0.48 - - - - -6.27 - -4.21 - -3.6 - 0.1 -6.28 - - -5.75 -5.4 -6.91 -6.06 -2.55 -3.49 -0.91 - - -8.14 - - - -5.08 -
-0.7 -0.08 -0.18 0.32 -5.45 -0.11 -0.97 -1.56 0.77 0.76 0.43 2.8 0.34 -0.26 1.22 -0.15 -0.18 0.25 0.36 0.03 -0.1 -0.5 -0.7 -1.2 -1.79 -0.91 0.27 0.08 -0.89 -6.52 -0.59 -0.14 -0.92 0.14 0.15 -0.33 0.08 -0.89 -0.02 -0.24 -1.75 -0.38 -0.54 -1.18
- -1.78 -1.2 - 1.24 -2.94 -4.1 0.27 -0.85 -0.65 -0.87 4.86 0.04 - -2.81 - - -5.94 - -4.09 -0.84 -0.62 - -3.71 - -1.23 -2.24 - - -3.49 -4.71 -2.8 - 1.47 -3.49 - -0.53 - - -4.81 -0.98 -1.66 -0.74 -1.71
0.07 -1.04 -0.77 0.89 -0.71 0.19 -0.66 0.05 0.27 0.34 0.27 2.12 -5.86 -0.57 0.46 0.56 0.64 0.76 0.32 0.0 -0.37 -0.76 -0.13 -0.99 -1.08 -1.32 0.62 0.63 -0.28 -7.55 -0.51 -0.42 -0.62 -0.78 0.68 -0.42 -0.24 -0.5 0.37 0.37 -0.38 -0.97 -0.42 -0.35
AT5G20910 (AIP2)
-1.3 0.25 -0.51 -1.7 -2.95 -1.16 -2.03 -0.68 -0.76 -0.62 -0.15 4.32 1.03 -1.43 -0.96 -2.25 -2.05 -1.94 -2.0 -2.34 -0.39 -0.9 -1.62 -0.78 -1.32 -0.85 -1.64 -1.44 -0.96 -3.5 -1.26 -0.59 -1.52 0.62 -1.76 1.11 -0.06 -0.77 -1.44 -0.49 -2.55 -2.54 -1.22 -1.26
1.7 - - - - - - - - 1.89 -0.16 2.87 - 2.64 - - -0.82 - - - - - - - - 2.85 -1.62 - - - - - -0.4 1.74 - 2.21 - - - - - - - 2.53
- -0.61 - - -0.29 - - - -2.1 -3.08 -1.72 5.18 - -3.07 -1.46 - -2.85 -3.1 -3.01 - -3.65 - -2.52 -3.13 -1.97 -0.78 -4.05 - - - -2.64 -3.29 -4.1 -0.74 -0.87 -0.64 -3.54 - -2.19 -3.92 - -1.08 -3.32 -1.45
AT5G60180 (PUM19)
- -3.44 -3.8 - 1.18 -3.99 -2.62 -6.49 -8.24 -4.52 -4.54 5.18 -6.22 -3.72 -4.04 -1.68 -2.35 -3.54 - -5.0 -3.96 -5.28 -4.98 -6.37 - -1.42 -4.14 -5.32 -6.57 -1.96 -5.52 -6.4 -5.04 -2.28 -1.45 1.23 -4.46 - -4.58 -5.2 -3.68 -3.73 -4.57 -4.65
- 1.58 - - 1.9 - - - - - -1.1 4.64 - - 1.81 - - - - - - - -0.45 - - - -2.89 - - - - - - - - 0.71 2.56 - - - - - - -
-4.33 0.09 -0.15 -4.41 2.92 -1.13 -2.2 -5.45 - -4.19 -4.04 3.98 1.13 -0.7 1.51 -4.98 -3.07 -2.93 -1.54 -1.02 -2.16 -3.37 -1.92 -0.43 -2.01 0.49 -1.59 -3.67 -2.63 0.29 -2.37 -1.02 -1.65 0.82 -1.54 -0.27 -0.01 -1.32 -2.19 -2.05 -3.38 -3.41 -4.66 -2.53
0.14 0.67 0.34 -0.25 1.06 -0.52 -1.03 -0.51 0.28 0.26 0.29 2.51 -0.72 0.23 0.14 -1.23 -0.98 -0.57 -0.31 -0.49 0.04 0.13 -0.41 -0.04 -0.29 -0.26 0.09 0.07 0.21 -2.37 -0.17 -1.61 -0.18 0.14 -0.97 1.18 -2.48 -1.98 -0.01 -0.22 -1.43 -0.65 -0.16 -0.42
ATCG00830 (RPL2.1)
- - - - - - - - -4.56 - - 5.31 -3.52 - - - - - - - -5.11 - - - - - - - - - -5.86 - - - -0.43 1.31 - - - - -3.13 -1.34 -2.17 -1.83

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.