Heatmap: Cluster_211 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light - ZT1
Light - ZT3
Light - ZT5
Light - ZT7
Light - ZT9
Light - ZT11
Light - ZT13
Light - ZT15
Dark - ZT17
Dark - ZT19
Dark - ZT21
Dark - ZT23
Light - ZT25
Nutrient stress - Low nitrogen - 10%
Nutrient stress - Low phosphate - 0%
Nutrient stress - Low sulfate - 2%
Nutrient stress - Low micronutrients - 0%
Nutrient stress - NaCl - 75 mM
Nutrient stress - Mannitol - 100 mM
Nutrient stress - Control
Environmental stress - Prolonged darkness - 72h
Environmental stress - Cold - 4C
Environmental stress - Heat - 37C
Environmental stress - Control
Environmental stress - High light - 150 uE
Environmental stress - Control high light - 40 uE
0.09 0.05 -0.02 0.01 0.09 -0.23 -0.19 -0.16 -0.09 0.07 0.31 0.32 0.09 -0.45 -0.79 -0.13 -0.45 0.4 0.35 0.26 -1.81 0.04 0.22 -0.15 0.25 0.45
0.49 0.51 0.15 -0.36 -0.57 -0.97 -0.17 -0.08 -0.45 -0.61 -0.62 -0.87 -0.18 0.17 0.33 0.1 0.02 1.01 0.75 0.44 -2.1 -1.53 1.1 -0.39 -0.09 -0.23
1.3 0.21 -0.75 -1.27 -1.19 -0.43 -0.08 0.05 -0.54 -0.53 -0.85 -0.76 1.09 0.21 0.58 -0.09 -0.08 0.28 0.41 -0.16 -0.36 -0.32 0.12 -0.7 0.46 -0.14
- -1.45 - -0.95 - - -1.02 1.31 - - -1.02 - - 0.64 1.07 1.52 0.18 1.99 2.39 1.48 - -0.35 -1.41 - - -0.29
- - - - - - 3.01 - - - - - - - - - - 2.42 3.65 - - - - - - -
-0.23 -0.5 -1.35 -0.29 -0.37 -0.69 0.21 0.73 0.67 0.52 -0.16 -0.57 -0.67 0.49 0.03 -0.1 -0.68 0.94 0.99 -0.54 -3.17 -1.69 -0.38 0.95 -0.04 0.17
- - - - - - - - - - - - - - - - - - - - - - - - - -
0.36 0.16 -0.31 -0.24 0.24 0.22 0.44 0.18 0.23 0.12 0.03 -0.14 -0.28 -0.61 0.41 0.15 0.08 0.43 0.65 0.53 -3.81 -1.83 0.07 -0.65 -0.39 -0.38
0.6 0.43 -0.01 -0.37 -0.42 -0.46 0.03 0.14 -0.13 -0.35 -0.54 -0.62 0.4 -0.29 0.75 -0.38 0.31 0.75 1.61 -0.08 -0.67 -1.51 0.19 -1.38 -1.47 -1.43
0.08 0.34 0.12 -0.14 -0.01 -0.11 0.18 0.26 0.11 0.03 -0.03 0.01 -0.01 -0.49 0.26 -0.04 0.36 0.34 0.87 0.36 -3.07 -0.82 0.41 -0.23 -1.05 -1.12
0.35 0.12 0.22 0.23 0.1 -0.41 -0.05 0.09 -0.35 0.09 0.02 0.06 0.29 -0.51 -0.78 -0.46 -0.13 0.28 0.37 0.11 -3.25 0.66 -0.92 0.19 0.08 0.48
- - - - - - - - - - - - - - 2.61 - - - 4.31 - - - - - - -
-1.55 -2.15 -3.49 0.48 -0.1 -0.54 -0.65 -1.78 -0.22 0.47 -0.17 -1.3 -0.79 -1.45 1.89 0.92 -0.62 0.64 1.59 0.16 0.28 0.48 -0.57 -0.06 -1.11 -1.84
0.87 0.51 0.12 -0.26 -0.32 -0.29 0.16 0.31 -0.23 -0.23 -0.51 -0.71 0.54 -1.1 0.06 -0.42 -0.01 0.87 0.74 0.35 -1.6 -0.33 0.62 -0.99 -0.45 -1.07
0.42 0.26 0.09 0.18 0.11 -0.19 0.02 0.28 -0.3 0.1 0.2 0.22 0.1 0.11 -0.19 -1.04 -0.16 0.18 0.74 -0.01 -3.1 0.16 -0.96 -0.35 -0.25 0.38
0.3 -0.06 -0.14 0.06 0.27 -0.36 0.06 -0.05 -0.44 -0.01 -0.27 -0.07 0.14 0.36 -0.51 -0.43 -0.22 0.52 0.6 0.16 -2.33 -0.15 -0.95 0.48 0.17 0.53
-1.23 -1.29 -0.36 -0.77 -0.68 0.44 -0.73 -0.53 -0.52 -0.4 -0.31 -0.18 -0.9 0.44 0.12 -0.03 -0.05 0.41 1.52 0.21 -0.66 -1.08 0.23 0.8 0.42 0.8
- - - - - - - - - - - - - - - - - - 4.7 - - - - - - -
-0.01 -0.05 -0.09 -0.02 -0.05 0.07 0.27 0.05 0.23 0.05 0.21 0.26 -0.06 -0.14 0.21 0.38 -0.12 0.51 0.28 -0.17 -2.31 -0.12 -0.38 -0.12 -0.29 -0.16
0.17 -0.83 -0.37 -0.16 -0.46 -0.54 -0.55 -2.79 -1.98 -3.11 - -2.89 -2.6 1.36 1.07 1.3 1.36 -0.55 1.95 1.14 -1.94 -1.04 -3.38 -0.81 -0.31 0.11
0.78 -0.0 -0.77 -0.97 -0.46 -0.1 0.2 -0.03 -0.25 -0.17 -0.36 -0.32 0.54 -0.21 0.2 -0.25 0.2 0.36 0.58 0.23 0.35 0.05 0.08 -0.3 -0.48 -0.36
0.66 0.02 -0.72 -1.02 -0.41 0.19 0.24 -0.14 -0.3 -0.21 -0.65 -0.56 0.39 0.11 0.52 -0.03 0.42 0.36 0.59 0.46 0.12 -0.3 -0.12 -0.42 -0.59 -0.29
0.57 0.38 0.03 -0.17 -0.06 0.21 0.89 0.64 0.42 -0.52 -0.57 -0.55 0.68 -1.28 -0.61 -0.08 0.2 0.43 0.41 0.12 -4.68 -0.99 0.86 -1.28 -0.6 -1.25
0.7 0.36 -0.38 -0.68 -0.64 -0.42 0.32 0.46 0.09 0.15 -0.09 -0.34 0.26 -0.46 -0.49 -0.74 -0.11 0.34 0.13 -0.2 -0.04 0.63 -0.03 -0.38 0.25 -0.09
0.05 -0.33 -0.16 -0.07 -0.09 -0.46 0.11 0.19 -0.09 0.2 0.2 0.43 0.28 -0.07 -0.64 -0.31 -0.14 0.7 0.24 0.12 -3.08 0.54 -0.82 -0.76 0.33 0.54
0.94 0.5 -0.34 -0.86 -0.85 -0.4 0.18 0.13 -0.1 -0.05 -0.33 -0.47 0.57 -0.66 -0.43 -1.04 0.08 0.63 0.44 0.2 0.76 -0.38 0.3 -0.09 -0.51 -0.79
- - - - - - - - - - 3.84 - - - - - - - 3.55 - - - - - - -
-1.11 0.34 0.23 0.19 0.08 -0.3 -0.02 -0.4 -0.56 0.07 -0.04 0.16 -1.18 -0.4 -0.33 0.38 -0.1 0.58 0.67 0.52 -1.88 0.03 -0.78 0.81 -0.4 0.45
- - - - - - - - - - - - - - 2.06 2.96 - -0.12 3.45 - 0.18 - - - - 0.05
0.14 0.06 0.13 0.14 -0.08 -0.3 -0.12 -0.0 -0.21 -0.07 0.16 0.38 0.19 -0.06 0.33 0.23 -0.21 0.51 0.34 -0.31 -2.06 -0.15 -0.19 0.04 -0.17 -0.1
0.35 0.07 -0.12 0.21 -0.06 -0.29 -0.25 -0.03 -0.12 -0.05 -0.05 0.15 0.28 -0.33 -0.14 -0.22 -0.2 0.64 1.43 -0.46 -2.71 -0.14 -0.8 -0.49 -0.08 0.17
-0.49 0.68 0.08 -0.14 -0.5 -1.0 -0.21 0.2 0.21 0.28 0.17 0.1 -1.27 -0.1 0.22 -0.71 -0.31 0.93 0.99 0.16 -3.29 0.01 -1.12 0.68 -0.2 -0.07
0.07 -0.07 -0.19 -0.29 -0.5 -0.51 -0.01 -0.09 -0.17 0.16 0.4 0.35 0.08 0.23 0.08 0.46 -0.02 0.37 0.21 0.01 -1.74 -0.67 -0.11 0.68 -0.32 -0.03
0.08 0.04 0.04 0.48 0.07 -0.59 -0.51 -0.12 -0.07 -0.17 0.22 0.27 -0.37 -0.98 -0.47 -0.34 -0.79 0.69 0.68 0.1 -2.64 0.38 -0.02 0.25 0.47 0.35
0.03 -1.09 0.33 - -0.96 - -0.46 -0.64 -0.68 - 0.28 - - 0.84 0.16 1.65 -0.43 0.79 1.29 2.76 - -0.06 - - -0.31 -
- - - - - - 1.52 - 1.56 3.0 2.45 - - - - - - - 2.75 - - - - - - -
- - - - - - 2.86 - - - - - - - - - - 2.26 2.49 - 1.86 - - - 2.23 -
- - 0.25 0.32 - - - - - - - - - - 1.08 0.23 - 0.89 3.48 - -0.2 - - 0.14 - 2.41
- - - - -0.62 - - -0.3 - -0.41 -0.31 - - 1.9 -0.41 -0.34 1.85 -0.91 3.14 2.24 - - - - - -
- - - - - - - - - - - - - - - - - - 3.51 - 1.92 - - - - 3.44
- - - - - - 2.84 - - - 0.31 - 2.27 - 0.12 - - - 3.55 - - - - - - -
-1.99 - - -0.1 - - - - -1.7 -1.8 -0.68 - -1.79 1.24 1.45 0.3 0.03 0.6 3.19 0.96 - - - 0.07 -1.3 0.96
- - - - - - - - - - - - - - - - - - 4.7 - - - - - - -
- - - -1.72 - -0.66 -1.59 - - - - - - - - -1.82 - 3.29 3.83 -2.18 - - - -1.9 - -
- - - - - - - - - - 3.18 - - - - - - - 4.08 - - - - - - -
- - - - - - - - - - - 3.91 - - - - - - 3.46 - - - - - - -
-0.87 1.15 0.86 0.15 0.28 0.53 0.63 0.76 0.37 -0.24 -0.84 -1.52 -1.43 -1.55 0.08 -1.75 0.28 0.78 1.76 0.87 -4.71 -4.23 -1.06 -3.16 -1.98 -2.28
-1.11 1.02 0.74 0.12 -0.05 -0.2 0.59 0.69 0.18 -0.29 -1.05 -1.78 -1.67 -1.26 0.04 -1.34 0.55 1.31 1.76 1.03 -4.19 -3.5 -0.63 -2.71 -1.43 -2.04
- - - - -0.58 - - - - - - - 0.11 0.87 1.59 - 0.82 -0.82 2.96 2.41 - - - 1.13 - 0.85
-0.2 -0.59 -0.26 -0.21 -0.13 -0.09 0.22 0.08 0.32 0.46 0.32 0.38 -0.37 0.42 0.26 0.36 0.06 0.22 -0.31 -0.14 -1.7 -1.52 0.04 0.67 -0.63 0.08
-0.41 -0.97 1.87 0.99 0.15 0.59 - - -0.5 - - - - 1.19 -0.64 1.02 - 0.89 2.88 0.1 - -0.94 - - - -
- - - - - - - - - - - - - - - - - - 3.44 - - - - - 1.12 3.7
-0.58 -0.32 -0.53 -0.04 -0.16 -0.73 -0.37 -0.35 -0.1 0.27 0.23 -0.47 -0.74 -0.09 -0.11 0.0 -0.34 0.59 1.26 -0.47 -0.18 -0.92 0.54 0.41 0.66 0.17
0.84 0.57 -0.29 -0.85 -0.88 -0.58 0.27 0.38 0.06 0.02 -0.32 -0.54 0.5 -0.43 0.27 -0.39 -0.05 0.66 0.38 -0.04 -0.54 -0.12 0.35 -0.34 -0.31 -0.59
- - 1.48 - - - - - - - - - - - 3.35 - - - 3.7 - - - - - - -
-0.17 -0.02 -0.15 -0.1 0.05 0.08 0.05 0.24 0.13 0.35 0.26 0.14 -0.44 -0.34 0.11 -0.36 0.11 0.78 0.99 -0.07 -3.88 -0.82 -0.54 -0.6 0.17 0.1
- - - - - - - - 2.21 2.0 - 3.18 - - - - - - 3.05 - - - - - - -
-0.18 - - - - 0.85 2.8 - 1.89 - 0.8 0.92 -0.27 0.25 - - 0.03 - 1.99 - 0.48 - - - -0.78 -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.