Heatmap: Cluster_275 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light - ZT1
Light - ZT3
Light - ZT5
Light - ZT7
Light - ZT9
Light - ZT11
Light - ZT13
Light - ZT15
Dark - ZT17
Dark - ZT19
Dark - ZT21
Dark - ZT23
Light - ZT25
Nutrient stress - Low nitrogen - 10%
Nutrient stress - Low phosphate - 0%
Nutrient stress - Low sulfate - 2%
Nutrient stress - Low micronutrients - 0%
Nutrient stress - NaCl - 75 mM
Nutrient stress - Mannitol - 100 mM
Nutrient stress - Control
Environmental stress - Prolonged darkness - 72h
Environmental stress - Cold - 4C
Environmental stress - Heat - 37C
Environmental stress - Control
Environmental stress - High light - 150 uE
Environmental stress - Control high light - 40 uE
0.13 0.62 0.34 -0.0 -0.42 -0.59 -0.61 -0.37 -0.86 -0.55 -0.62 -0.48 0.01 -0.73 -0.32 -0.41 -0.16 0.37 0.09 -0.03 0.37 -0.57 1.72 0.6 -0.51 -0.35
0.68 1.37 0.96 0.73 -0.56 -2.5 -3.23 -2.24 -2.24 -2.71 -1.6 -1.49 -0.17 -1.51 -2.65 -1.6 -3.62 -1.14 -1.1 -0.75 1.23 0.07 2.84 -0.91 -1.16 0.16

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.