Heatmap: Cluster_251 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light - ZT1
Light - ZT3
Light - ZT5
Light - ZT7
Light - ZT9
Light - ZT11
Light - ZT13
Light - ZT15
Dark - ZT17
Dark - ZT19
Dark - ZT21
Dark - ZT23
Light - ZT25
Nutrient stress - Low nitrogen - 10%
Nutrient stress - Low phosphate - 0%
Nutrient stress - Low sulfate - 2%
Nutrient stress - Low micronutrients - 0%
Nutrient stress - NaCl - 75 mM
Nutrient stress - Mannitol - 100 mM
Nutrient stress - Control
Environmental stress - Prolonged darkness - 72h
Environmental stress - Cold - 4C
Environmental stress - Heat - 37C
Environmental stress - Control
Environmental stress - High light - 150 uE
Environmental stress - Control high light - 40 uE
-0.81 -2.61 - 0.47 0.03 - 1.17 0.67 1.4 0.04 0.79 -0.1 -1.76 -1.08 - -0.47 -2.22 -0.35 -0.84 -0.79 -2.64 0.61 1.99 0.81 -0.02 -0.66
-0.56 -0.6 -0.7 -0.14 0.73 -0.58 0.41 -0.5 1.11 0.19 0.62 0.0 -1.77 -0.08 -0.81 0.06 -1.31 -0.92 -0.47 -0.38 0.56 -0.24 1.29 1.09 -1.26 -1.52

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.