Heatmap: Cluster_289 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light - ZT1
Light - ZT3
Light - ZT5
Light - ZT7
Light - ZT9
Light - ZT11
Light - ZT13
Light - ZT15
Dark - ZT17
Dark - ZT19
Dark - ZT21
Dark - ZT23
Light - ZT25
Nutrient stress - Low nitrogen - 10%
Nutrient stress - Low phosphate - 0%
Nutrient stress - Low sulfate - 2%
Nutrient stress - Low micronutrients - 0%
Nutrient stress - NaCl - 75 mM
Nutrient stress - Mannitol - 100 mM
Nutrient stress - Control
Environmental stress - Prolonged darkness - 72h
Environmental stress - Cold - 4C
Environmental stress - Heat - 37C
Environmental stress - Control
Environmental stress - High light - 150 uE
Environmental stress - Control high light - 40 uE
0.19 -0.59 -1.41 0.52 0.57 0.15 -0.43 -0.17 1.13 0.21 1.23 0.97 -0.72 -0.88 -1.16 -0.69 -0.78 -0.67 -0.01 -1.12 0.8 -0.67 -0.01 -0.51 0.01 -0.81
-0.79 -0.35 0.13 0.43 0.65 0.35 0.17 0.46 0.53 0.1 0.26 -0.18 -1.05 -0.04 -0.46 0.27 -0.18 0.37 0.25 -0.43 -0.12 0.02 -0.57 -1.0 -0.23 -0.34

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.