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Heatmap: Cluster_230 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Light - ZT1
Light - ZT3
Light - ZT5
Light - ZT7
Light - ZT9
Light - ZT11
Light - ZT13
Light - ZT15
Dark - ZT17
Dark - ZT19
Dark - ZT21
Dark - ZT23
Light - ZT25
Nutrient stress - Low nitrogen - 10%
Nutrient stress - Low phosphate - 0%
Nutrient stress - Low sulfate - 2%
Nutrient stress - Low micronutrients - 0%
Nutrient stress - NaCl - 75 mM
Nutrient stress - Mannitol - 100 mM
Nutrient stress - Control
Environmental stress - Prolonged darkness - 72h
Environmental stress - Cold - 4C
Environmental stress - Heat - 37C
Environmental stress - Control
Environmental stress - High light - 150 uE
Environmental stress - Control high light - 40 uE
0.1 0.21 0.27 0.67 0.47 0.13 0.59 0.88 0.42 1.25 1.22 0.98 -0.01 -3.64 -2.5 -5.32 -0.87 -0.18 0.11 0.32 -7.06 -3.35 -1.37 -1.46 -0.7 -0.67
-0.04 0.08 0.33 0.49 0.15 -0.28 0.46 0.79 -0.03 1.11 1.03 0.67 -0.23 -3.13 -2.03 -4.0 -0.29 0.76 0.55 0.82 -8.07 -2.33 -0.86 -1.41 -0.49 -0.67
-0.37 0.08 0.26 0.27 0.57 0.49 0.61 0.54 0.49 0.6 0.42 0.39 -0.43 -0.66 -0.51 -0.58 -0.15 0.27 0.13 -0.02 -2.05 -0.66 -1.07 -0.81 -0.35 -0.54
-0.06 0.41 0.6 0.63 0.68 0.78 0.57 0.51 0.55 0.64 0.71 0.54 -0.49 -1.69 -1.12 -2.29 -0.35 -0.32 -0.23 0.46 -4.14 -0.97 -1.7 -0.9 -0.44 -0.63
-0.36 -0.07 0.4 0.6 0.69 0.31 0.56 0.62 0.35 0.92 0.64 0.32 -0.76 -2.48 -0.91 -2.48 0.05 0.48 0.45 1.03 -6.72 -2.67 -1.6 -1.61 -0.64 -0.31
-2.95 -1.02 -0.29 -0.29 0.17 0.12 0.3 0.18 0.76 0.82 1.01 0.92 -1.76 -0.52 -0.72 -0.66 -0.48 -0.22 -0.01 -0.02 -4.48 0.85 -0.47 0.66 -0.25 0.01
-0.1 0.37 0.44 0.56 0.57 0.4 0.16 0.3 0.44 0.57 0.46 0.31 -0.29 -0.67 -0.85 -1.19 -0.5 -0.19 -0.07 0.08 -2.65 -0.04 -0.2 -0.85 -0.08 -0.33
-0.08 0.27 0.37 0.25 0.43 0.32 0.63 0.39 0.48 0.52 -0.05 -0.27 -0.42 -0.21 -0.05 -0.24 0.14 0.44 0.33 0.14 -1.98 -1.02 -1.25 -1.1 -0.83 -0.2
-0.24 -1.91 -0.85 -0.12 0.35 0.53 0.44 0.31 0.39 0.61 0.64 0.74 -0.06 -1.11 -0.98 -1.04 -0.25 0.05 -0.46 0.14 -5.3 -0.28 -0.15 0.71 0.39 0.29
-0.97 -0.51 -0.63 -0.38 0.16 0.73 0.76 0.62 1.2 0.85 0.65 0.07 -1.65 -1.21 -0.18 -0.96 -0.18 0.26 0.61 0.51 -8.79 -0.24 -0.55 -0.26 -0.61 -1.16
0.47 0.06 0.28 0.72 0.76 0.93 0.68 0.77 0.48 0.68 0.49 0.32 -0.1 -2.14 -0.27 -2.72 -0.93 -0.28 -0.46 0.06 -5.64 -1.32 -0.5 -1.3 -0.67 -0.38
-0.19 -0.1 0.05 0.04 0.46 0.53 0.37 0.31 0.43 0.51 0.58 0.41 -0.38 -0.55 -0.17 -0.39 -0.08 -0.1 -0.08 0.19 -2.9 -0.67 -0.41 -0.41 -0.08 -0.15
-1.02 -0.42 0.24 0.09 0.2 -0.16 0.48 0.45 0.49 0.35 0.47 -0.33 -1.46 0.08 0.81 -0.03 0.6 0.76 0.31 1.05 -2.57 -1.68 -0.79 -1.53 -1.67 -1.17
-0.76 -1.25 -1.75 -0.49 0.26 0.01 0.37 0.08 0.67 0.88 0.78 0.79 -0.27 -0.0 -0.54 -0.29 -0.85 0.01 -0.44 -0.7 -3.52 0.85 -0.05 0.96 -0.49 -0.3
0.24 -0.61 -0.63 -0.0 0.5 0.83 0.57 0.43 0.47 0.59 0.66 0.6 0.21 -1.24 -0.03 -1.71 -0.19 -0.85 -0.69 -0.19 -4.09 -0.25 -1.27 0.37 -0.03 0.19
-0.03 -0.07 0.17 0.34 0.42 0.3 0.48 0.75 0.69 0.61 0.41 0.22 -0.02 -0.95 -0.44 -0.69 -0.16 0.1 0.13 0.33 -5.56 -0.43 -0.9 -1.22 -0.5 -0.35
-0.34 -0.27 -0.28 0.38 0.69 0.24 0.51 0.57 0.59 0.69 0.48 -0.0 -0.5 -0.57 -0.3 -0.34 -0.36 -0.0 0.42 0.0 -4.41 0.07 -0.69 -0.73 -0.26 -0.35
-1.27 -0.62 -0.87 -0.46 0.31 0.51 0.59 0.8 0.79 1.27 0.93 0.41 -2.24 -1.29 -1.09 -0.81 -0.34 0.35 -0.01 0.47 -4.87 -1.5 -0.38 -0.36 0.53 -0.18
-0.26 -0.34 -0.39 0.25 0.49 0.35 0.96 0.94 1.23 1.05 0.95 0.68 -0.43 -1.77 -0.88 -1.8 -0.76 -0.09 0.14 -0.19 -4.37 -2.86 -0.11 -0.81 -1.23 -1.17
-0.04 0.35 -0.1 0.15 0.52 0.68 0.7 0.47 0.57 0.62 0.45 0.13 -0.61 -1.08 -0.87 -0.96 -0.2 0.35 -0.03 0.2 -2.56 -0.18 -1.15 -0.52 -0.37 -0.42
0.17 0.14 0.04 0.09 0.43 0.62 0.47 0.49 0.54 0.12 0.26 0.24 -0.16 -0.42 -0.38 -0.05 -0.33 -0.04 0.02 0.06 -2.93 -1.06 -0.35 0.16 -0.9 -0.26
-0.92 -2.34 -0.69 -0.26 0.28 0.69 0.97 0.64 0.46 1.59 1.42 1.27 -0.14 -3.12 -2.1 -4.38 -0.41 -0.13 -0.05 0.76 - -2.41 -0.63 -0.71 -0.74 -1.61
-0.6 0.19 0.27 0.18 0.43 0.67 0.64 0.56 0.83 0.59 0.65 0.46 -1.24 -1.9 -0.76 -1.13 -0.44 -0.18 0.06 -0.06 -2.99 0.01 -0.12 0.33 -1.06 -1.03
-0.6 -0.59 -0.26 -0.01 0.4 0.46 0.6 0.4 0.79 0.47 0.36 0.22 -0.75 -0.38 -0.01 0.03 -0.4 0.39 0.35 0.11 -2.31 -1.44 -0.37 0.29 -0.31 -0.74
-0.54 0.14 0.51 0.23 -0.01 -0.3 0.2 0.41 0.37 0.72 0.94 0.84 -0.01 -1.46 -1.27 -1.43 -0.18 0.25 -0.1 0.74 -4.87 -0.65 -1.12 -0.39 -0.08 0.05
-0.17 0.11 0.29 0.22 0.57 0.72 0.99 0.69 0.31 0.28 -0.23 -0.63 -0.87 -0.74 -0.02 -0.36 -0.08 0.25 -0.13 0.27 -2.02 -0.15 -0.66 -0.83 -0.41 -0.51
-0.22 0.21 0.08 0.22 0.35 0.36 0.73 0.34 0.49 0.56 0.06 0.14 -0.38 -0.67 -0.52 -0.43 0.11 0.16 0.08 0.32 -3.82 -0.39 -0.98 -0.43 0.06 -0.32
-2.2 0.11 -0.92 -0.13 0.68 0.62 1.11 1.14 0.93 1.4 1.58 0.53 -1.74 -4.06 -2.77 -5.23 -1.16 0.29 -0.13 0.27 -4.15 - -1.02 0.22 -1.67 -1.21
-0.53 -0.06 -0.1 0.07 0.41 0.79 0.54 0.47 0.77 0.69 0.75 0.64 -0.58 -1.61 -1.16 -1.53 -0.48 0.04 0.1 0.48 -4.85 -0.31 -0.99 -0.03 -0.5 -0.21
-1.19 -0.46 -0.38 0.14 0.33 0.4 0.77 0.68 1.01 1.12 0.91 0.5 -1.33 -1.5 -0.77 -1.56 -0.66 0.43 0.16 0.49 -6.17 -3.15 -0.0 -0.61 -0.02 -0.63
-0.91 0.33 0.32 0.64 0.82 0.44 0.53 0.53 0.35 0.61 0.4 0.1 -1.6 -1.14 -0.76 -1.4 -0.29 0.13 0.34 0.21 -7.07 -0.62 -0.61 -0.26 0.21 -0.3
0.03 0.31 0.54 0.57 0.61 0.63 0.39 0.48 0.35 0.3 0.08 0.08 -0.05 -1.05 -0.97 -1.04 -0.16 0.2 0.14 0.45 -4.18 -1.82 -0.54 -0.55 -0.3 -0.1
-1.43 -1.19 -0.63 0.34 0.76 0.77 0.78 0.71 1.08 1.47 1.45 1.05 -0.9 -4.49 -2.98 -5.39 -1.05 0.38 -0.56 0.84 -6.42 -2.71 -2.53 -0.4 -1.37 -1.38
-0.55 -0.56 -0.2 -0.25 0.16 0.09 -0.08 -0.12 0.58 0.89 0.75 0.5 -0.21 -0.2 -0.33 0.13 -0.2 0.3 0.37 -0.24 -1.68 -0.24 -0.07 -0.44 -0.4 -0.06
-0.65 -0.82 -0.53 -0.36 0.07 0.07 0.29 0.03 0.06 0.5 0.35 0.41 -0.47 0.04 -0.68 0.01 0.16 0.12 0.06 0.51 -2.7 0.92 -0.63 0.46 -0.44 0.09
-1.64 -0.06 0.24 0.71 0.56 0.24 0.58 0.78 0.38 0.85 1.0 0.61 -1.34 -0.97 -1.72 -1.77 -0.78 -0.06 0.05 0.18 -2.36 -0.45 -0.12 -0.75 -0.03 -0.38
-0.22 0.31 0.33 0.48 0.5 0.57 0.54 0.73 0.59 0.25 0.49 0.24 -0.22 -1.06 -0.53 -0.98 -0.4 -0.06 -0.03 -0.56 -2.86 -0.61 -0.38 -0.62 -0.12 -0.13
0.09 -0.19 0.03 -0.12 0.4 0.44 0.42 0.35 0.37 0.41 0.32 0.28 0.06 -0.53 -0.45 -0.39 0.16 0.19 0.09 0.45 -3.64 -0.93 -0.93 -0.17 -0.04 -0.23
-1.19 -1.9 -1.03 -0.65 -0.26 0.4 0.49 0.46 0.7 1.1 1.03 0.85 -0.78 -1.49 -1.97 -1.19 -0.34 0.6 0.03 0.44 -5.17 0.05 -1.13 0.55 0.18 0.24
-1.47 -0.93 -1.11 -0.59 0.26 0.55 0.8 1.01 1.3 0.82 1.01 0.15 -1.78 -1.21 -1.49 -1.17 -0.42 0.5 -0.05 0.06 -6.73 -1.18 -0.0 -0.47 0.75 -0.58
0.15 0.21 -0.19 -0.09 0.53 0.42 0.79 0.41 0.51 0.38 0.38 0.15 -0.32 -0.36 -0.2 -0.24 -0.04 0.21 -0.05 0.44 -4.86 -1.45 -0.49 -0.64 -0.88 -0.18
0.0 0.12 -0.2 0.05 0.33 0.95 0.91 1.06 1.11 0.85 0.62 0.09 -0.89 -1.98 -1.01 -1.1 -0.53 -0.15 0.02 0.24 -8.17 -1.04 -2.48 -0.52 -0.4 -0.7

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.