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Heatmap: Cluster_279 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Light - ZT1
Light - ZT3
Light - ZT5
Light - ZT7
Light - ZT9
Light - ZT11
Light - ZT13
Light - ZT15
Dark - ZT17
Dark - ZT19
Dark - ZT21
Dark - ZT23
Light - ZT25
Nutrient stress - Low nitrogen - 10%
Nutrient stress - Low phosphate - 0%
Nutrient stress - Low sulfate - 2%
Nutrient stress - Low micronutrients - 0%
Nutrient stress - NaCl - 75 mM
Nutrient stress - Mannitol - 100 mM
Nutrient stress - Control
Environmental stress - Prolonged darkness - 72h
Environmental stress - Cold - 4C
Environmental stress - Heat - 37C
Environmental stress - Control
Environmental stress - High light - 150 uE
Environmental stress - Control high light - 40 uE
-0.95 -0.51 0.18 -0.15 -0.18 1.33 -0.1 0.49 0.37 -0.07 0.89 1.59 -0.42 -0.13 -3.06 -2.98 -0.11 -1.38 -1.17 0.54 -2.15 - -0.16 0.62 -0.55 0.49
-0.36 -0.18 -0.88 -1.24 0.67 0.89 -0.29 -0.1 0.73 -0.06 1.14 1.51 0.28 -1.59 -0.6 -0.37 -1.57 -0.87 -0.7 -0.91 -1.67 - 0.31 0.36 0.86 -0.23
-0.91 -1.94 -0.59 -0.71 -0.16 0.2 0.66 -1.52 1.07 0.31 0.74 1.22 0.29 0.99 -0.02 -0.69 0.08 -0.86 0.06 -0.68 -2.08 -2.44 -0.02 0.41 -0.42 0.07

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.