Heatmap: Cluster_55 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Egg apparatus cell (small)
Egg apparatus cell (medium)
Egg apparatus cell (large)
Ovary
Uninuclear microspore
Generative cell
Pollen
Sperm
Pollen tube (bicellular)
Pollen tube (tricellular)
Flower (bud, female)
Flower (bud, male)
Flower (female)
Flower (male)
Flower (tepals)
Fruit (female)
Apical meristem
Shoot (female)
Shoot (male)
Leaf (male)
Leaves
Root (male)
AMTR_s00001p00031070 (evm_27.TU.AmTr_v1.0_scaffold00001.14)
- - - - 4.11 - 2.24 - - - - - - - - - - - - - - -
AMTR_s00001p00272480 (evm_27.TU.AmTr_v1.0_scaffold00001.532)
- - - - 2.49 - - - - 2.0 - - 3.63 - - - - - - - - -
AMTR_s00001p00272860 (evm_27.TU.AmTr_v1.0_scaffold00001.570)
- - - - - - - - - - - - 4.46 - - - - - - - - -
AMTR_s00001p00272870 (evm_27.TU.AmTr_v1.0_scaffold00001.571)
- - - - - - - - - - - - 4.46 - - - - - - - - -
AMTR_s00001p00272930 (evm_27.TU.AmTr_v1.0_scaffold00001.577)
- - - - 3.36 - - - -0.22 -1.45 - - 2.64 0.2 -0.47 - - - - 0.56 - -0.15
AMTR_s00001p00273110 (evm_27.TU.AmTr_v1.0_scaffold00001.595)
- - - - 3.72 - - - 0.96 - - - 1.83 - - - - - - - - 1.71
AMTR_s00003p00106540 (evm_27.TU.AmTr_v1.0_scaffold00003.72)
-5.01 - 1.94 -3.9 -6.55 - -7.54 - -8.96 -8.33 -0.73 -0.34 3.6 -0.09 -0.11 0.44 -2.31 -2.41 -1.74 -1.58 -2.15 -4.37
AMTR_s00003p00264210 (evm_27.TU.AmTr_v1.0_scaffold00003.358)
-5.49 -1.0 -1.8 - -4.04 - -6.06 - -7.09 -7.04 0.41 -2.69 4.02 -7.3 -5.98 -5.48 -2.6 -0.76 -1.94 -2.73 -1.09 0.78
AMTR_s00004p00268940 (evm_27.TU.AmTr_v1.0_scaffold00004.273)
- - - - - - - - - - - - 4.46 - - - - - - - - -
AMTR_s00005p00081810 (evm_27.TU.AmTr_v1.0_scaffold00005.17)
- - - - - - - - 1.76 1.96 - - 3.29 - 2.31 - - - - - - -
AMTR_s00005p00266360 (evm_27.TU.AmTr_v1.0_scaffold00005.230)
- - - - - - - - 3.19 - - - 3.68 - - - - - - - - -
AMTR_s00006p00128990 (evm_27.TU.AmTr_v1.0_scaffold00006.47)
- - - - 0.71 - - - - - - - 4.35 - - - - - - - - -
AMTR_s00006p00132950 (evm_27.TU.AmTr_v1.0_scaffold00006.52)
- - - - - - - - - - - - 4.46 - - - - - - - - -
AMTR_s00007p00145080 (evm_27.TU.AmTr_v1.0_scaffold00007.101)
- - - - 3.8 - - - - - - - 2.71 - 0.59 - - - - - - -
AMTR_s00008p00063090 (evm_27.TU.AmTr_v1.0_scaffold00008.20)
- - - - 3.03 - - - - - - - 3.79 - - - - - - - - -
AMTR_s00008p00221460 (evm_27.TU.AmTr_v1.0_scaffold00008.137)
- - - - 3.81 - - - - - - - 3.0 - - - - - - - - -
AMTR_s00008p00267990 (evm_27.TU.AmTr_v1.0_scaffold00008.239)
- - - - 2.63 - - - - 0.19 - - 3.5 - 1.76 - - - - - - -
AMTR_s00010p00068530 (evm_27.TU.AmTr_v1.0_scaffold00010.36)
- - - - 0.33 - - - - - - - 3.13 - - - - 3.38 - - - 0.66
AMTR_s00010p00070590 (evm_27.TU.AmTr_v1.0_scaffold00010.42)
- - - - 3.68 - 3.19 - - - - - - - - - - - - - - -
AMTR_s00010p00198610 (evm_27.TU.AmTr_v1.0_scaffold00010.186)
- - - - 3.71 - - - - - - - 3.15 - - - - - - - - -
AMTR_s00011p00264640 (evm_27.TU.AmTr_v1.0_scaffold00011.212)
- - - - 3.4 - - - - - - - 3.52 - - - - - - - - -
AMTR_s00012p00139070 (evm_27.TU.AmTr_v1.0_scaffold00012.72)
- - - - 4.08 - - - - - - - 2.36 - - - - - - - - -
AMTR_s00012p00213650 (evm_27.TU.AmTr_v1.0_scaffold00012.153)
- - - - 1.0 - - - - - - - 4.13 - 1.32 - - - - - - -
- - - - - - - - - - - - 4.46 - - - - - - - - -
AMTR_s00013p00131220 (evm_27.TU.AmTr_v1.0_scaffold00013.64)
1.25 - - - 2.46 - - - - - - - 3.27 - -1.12 - - - - 2.0 - -
AMTR_s00013p00216160 (evm_27.TU.AmTr_v1.0_scaffold00013.151)
- - - - 3.76 - - - - - - - 3.08 - - - - - - - - -
AMTR_s00014p00238430 (evm_27.TU.AmTr_v1.0_scaffold00014.107)
0.88 -0.7 -0.62 -9.25 0.47 -5.71 -7.9 -10.37 -5.47 -5.98 -1.18 -0.74 3.48 0.73 0.43 -1.73 -1.9 -3.06 -1.13 -0.45 -1.86 -4.14
AMTR_s00014p00255120 (evm_27.TU.AmTr_v1.0_scaffold00014.142)
- - - - 3.91 - - - - - - - 2.79 - - - - - - - - -
AMTR_s00015p00094260 (evm_27.TU.AmTr_v1.0_scaffold00015.24)
- - - - - - - - - - - - 4.46 - - - - - - - - -
AMTR_s00016p00045680 (evm_27.TU.AmTr_v1.0_scaffold00016.18)
- - - 2.01 3.63 - - - - - - - 2.49 - - - - - - - - -
AMTR_s00016p00052620 (evm_27.TU.AmTr_v1.0_scaffold00016.19)
- - - - 3.85 - - - - - - - 2.92 - - - - - - - - -
AMTR_s00017p00252860 (evm_27.TU.AmTr_v1.0_scaffold00017.260)
- - - - -3.04 - -2.15 - -0.68 -0.66 -0.62 -1.42 2.53 -1.76 -1.65 -1.4 0.48 0.19 1.44 1.54 0.4 1.65
AMTR_s00022p00160220 (evm_27.TU.AmTr_v1.0_scaffold00022.162)
- - - - 3.6 - - - - - - - 3.3 - - - - - - - - -
AMTR_s00022p00193900 (evm_27.TU.AmTr_v1.0_scaffold00022.217)
- - - - -1.43 - -5.44 - - - -1.58 -0.8 3.81 -0.87 -1.2 -1.36 -2.94 - -0.44 -0.96 - 1.97
AMTR_s00022p00220540 (evm_27.TU.AmTr_v1.0_scaffold00022.274)
- - - - 3.3 - - - - - - - 3.6 - - - - - - - - -
AMTR_s00028p00159770 (evm_27.TU.AmTr_v1.0_scaffold00028.64)
- - 1.55 -2.14 0.89 -2.74 0.94 -1.52 0.44 0.16 -0.91 -0.7 2.8 -2.1 -2.01 -3.26 -2.2 -2.89 -3.87 -3.78 -2.05 1.41
AMTR_s00030p00111560 (evm_27.TU.AmTr_v1.0_scaffold00030.55)
- - - - 3.68 - - - - - - - 3.2 - - - - - - - - -
AMTR_s00036p00237560 (evm_27.TU.AmTr_v1.0_scaffold00036.184)
- - - - -1.53 - - - - -2.75 - - 4.31 -3.11 0.34 - - - - - - -2.04
AMTR_s00036p00241070 (evm_27.TU.AmTr_v1.0_scaffold00036.197)
- - - - - - - - - - - - 4.46 - - - - - - - - -
AMTR_s00037p00210010 (evm_27.TU.AmTr_v1.0_scaffold00037.111)
- - - - 3.76 - - - - - - - 3.07 - - - - - - - - -
AMTR_s00038p00236140 (evm_27.TU.AmTr_v1.0_scaffold00038.238)
- - 1.39 - - - - - - - 0.47 - 3.17 -0.11 - - -0.91 1.04 0.88 -0.15 - 1.46
AMTR_s00040p00230230 (evm_27.TU.AmTr_v1.0_scaffold00040.276)
- - - - 1.29 - - - - - - - 4.14 - -0.87 - - - - -2.04 - 0.23
AMTR_s00041p00176950 (evm_27.TU.AmTr_v1.0_scaffold00041.137)
- - - - 2.66 - 0.68 - - - - - 3.81 - - - - - - - - -
AMTR_s00044p00054130 (evm_27.TU.AmTr_v1.0_scaffold00044.25)
-0.78 0.14 -2.74 -2.23 -7.74 -5.86 -9.45 - -10.44 -8.55 -1.85 - 3.61 -3.13 -4.91 -4.04 -6.93 - - -7.14 - 2.85
AMTR_s00044p00221990 (evm_27.TU.AmTr_v1.0_scaffold00044.239)
- - - - -2.54 - - - - - - - 4.21 - - - - - - 1.72 - -
AMTR_s00046p00182590 (evm_27.TU.AmTr_v1.0_scaffold00046.103)
- - - - 4.01 - - - - - - - 2.55 - - - - - - - - -
AMTR_s00047p00225590 (evm_27.TU.AmTr_v1.0_scaffold00047.180)
2.67 - -2.78 - -3.19 - - - - - -1.62 - 3.68 - - 1.18 - - - - - -
AMTR_s00047p00225620 (evm_27.TU.AmTr_v1.0_scaffold00047.181)
- - - - -1.2 - - - - - - - 4.42 -3.5 - - - - - - - -
AMTR_s00049p00074250 (evm_27.TU.AmTr_v1.0_scaffold00049.47)
-2.88 - - -3.46 1.2 - -6.45 -8.44 -6.83 -5.82 -1.34 -1.13 3.64 0.9 0.82 -0.46 -2.67 -2.38 -1.67 -1.76 -2.8 -0.53
AMTR_s00050p00103750 (evm_27.TU.AmTr_v1.0_scaffold00050.20)
- - - - 0.09 - - - -5.04 - - 2.04 3.78 - - - -0.68 - 0.81 - - -0.59
AMTR_s00050p00195600 (evm_27.TU.AmTr_v1.0_scaffold00050.61)
2.85 - - - 2.77 - - - - - - - 2.09 0.57 - - - - - 1.16 - -
AMTR_s00054p00203410 (evm_27.TU.AmTr_v1.0_scaffold00054.84)
- - - - - - - - - - - - 4.46 - - - - - - - - -
AMTR_s00057p00163750 (evm_27.TU.AmTr_v1.0_scaffold00057.157)
- - - - 3.75 - - - - 1.95 - - 2.23 - - - - - - - - -
AMTR_s00057p00173320 (evm_27.TU.AmTr_v1.0_scaffold00057.181)
- 0.52 - -1.03 -1.49 - -8.9 -7.01 - - -4.88 -2.42 4.26 -1.63 -5.12 - - - - - - -
AMTR_s00059p00078400 (evm_27.TU.AmTr_v1.0_scaffold00059.53)
- - - -4.75 2.21 - - - - - -1.48 - 3.26 -3.99 -0.03 - - - - - - 2.66
AMTR_s00059p00190970 (evm_27.TU.AmTr_v1.0_scaffold00059.210)
- - - - -0.81 - - - - - - - 4.39 - -1.19 - - - - - - -
AMTR_s00059p00191030 (evm_27.TU.AmTr_v1.0_scaffold00059.211)
0.81 -2.19 0.71 -5.42 - - -8.26 - -6.43 -6.67 -0.22 -1.58 3.15 -3.78 -0.39 0.99 -1.91 -2.77 1.52 1.09 - -6.23
AMTR_s00060p00162840 (evm_27.TU.AmTr_v1.0_scaffold00060.100)
- - - - - - - - 2.41 - - - 3.69 - - - - - - 1.91 - -
AMTR_s00062p00123340 (evm_27.TU.AmTr_v1.0_scaffold00062.101)
- - - - 3.45 - 2.43 - - - - - 1.85 - 1.06 - - - - - - -
AMTR_s00063p00104730 (evm_27.TU.AmTr_v1.0_scaffold00063.18)
- - - - 3.89 - - - - - - - 2.84 - - - - - - - - -
AMTR_s00066p00142310 (evm_27.TU.AmTr_v1.0_scaffold00066.142)
- - - - 3.53 - - - - - - - 3.38 - - - - - - - - -
AMTR_s00068p00165220 (evm_27.TU.AmTr_v1.0_scaffold00068.118)
- - - - -3.96 - -8.06 - -8.1 -7.27 -0.29 - 3.65 -7.53 - - - - - - - 3.09
AMTR_s00072p00131730 (evm_27.TU.AmTr_v1.0_scaffold00072.72)
- - - - - - - - - - - - 4.46 - - - - - - - - -
AMTR_s00072p00153210 (evm_27.TU.AmTr_v1.0_scaffold00072.88)
- - - - 4.14 - - - - - - - 2.11 - - - - - - - - -
AMTR_s00073p00155750 (evm_27.TU.AmTr_v1.0_scaffold00073.43)
- - - - 3.66 - 3.23 - - - - - - - - - - - - - - -
AMTR_s00076p00112190 (evm_27.TU.AmTr_v1.0_scaffold00076.34)
- - - - 3.59 - - - - - - - 3.32 - - - - - - - - -
AMTR_s00078p00058150 (evm_27.TU.AmTr_v1.0_scaffold00078.30)
- - - - -5.49 - -3.22 -1.67 -2.33 -2.61 -1.27 -2.67 4.0 -6.41 -2.88 - -0.92 -0.86 -0.51 -0.6 -0.43 0.32
AMTR_s00078p00152820 (evm_27.TU.AmTr_v1.0_scaffold00078.129)
- - - - 4.14 - - - - - - - 2.14 - - - - - - - - -
AMTR_s00079p00117660 (evm_27.TU.AmTr_v1.0_scaffold00079.45)
- - - - 2.87 - -0.16 - - - - - 3.65 - 0.35 - - - - - - -
AMTR_s00079p00170790 (evm_27.TU.AmTr_v1.0_scaffold00079.84)
- - - - 0.57 - - - - - - - 4.29 -0.83 -1.18 - - - - - - -
AMTR_s00079p00176960 (evm_27.TU.AmTr_v1.0_scaffold00079.96)
- - - - 3.03 - - - - - - - 3.79 - - - - - - - - -
AMTR_s00080p00018490 (evm_27.TU.AmTr_v1.0_scaffold00080.2)
- - - - 3.78 - - - 1.61 - - - 2.39 - - - - - - - - -
AMTR_s00085p00076310 (evm_27.TU.AmTr_v1.0_scaffold00085.37)
- - - - 4.14 - - - - - - - 2.12 - - - - - - - - -
AMTR_s00088p00042740 (evm_27.TU.AmTr_v1.0_scaffold00088.21)
- - - - -0.11 - - - - - - - 4.26 - -0.85 - - - - - - 0.49
AMTR_s00088p00105090 (evm_27.TU.AmTr_v1.0_scaffold00088.69)
- - 3.67 - - - - - - - - - 3.21 - - - - - - - - -
AMTR_s00088p00135080 (evm_27.TU.AmTr_v1.0_scaffold00088.101)
- - - - 1.9 - - - - - - - 3.94 - 1.54 - - - - - - -
AMTR_s00093p00075800 (evm_27.TU.AmTr_v1.0_scaffold00093.18)
- - - - - - - - - - - - 4.46 - - - - - - - - -
AMTR_s00096p00152180 (evm_27.TU.AmTr_v1.0_scaffold00096.94)
- - - - - - - - - - - - 4.38 - 0.26 - - - - - - -
AMTR_s00096p00152260 (evm_27.TU.AmTr_v1.0_scaffold00096.95)
- - - - - - - - - - - - 4.46 - - - - - - - - -
AMTR_s00098p00075150 (evm_27.TU.AmTr_v1.0_scaffold00098.11)
- - - - 4.02 - - - - - - - 2.52 - - - - - - - - -
AMTR_s00099p00160150 (evm_27.TU.AmTr_v1.0_scaffold00099.160)
- - - - -2.33 - -2.93 -8.2 -2.73 -2.59 -0.28 -2.39 3.8 -3.57 -2.55 -3.77 -2.12 -3.39 -2.69 -2.91 -2.96 2.42
AMTR_s00101p00034540 (evm_27.TU.AmTr_v1.0_scaffold00101.9)
- - - - 3.36 - - - - - - - 3.09 -0.16 1.24 - - - - - - -
AMTR_s00102p00092780 (evm_27.TU.AmTr_v1.0_scaffold00102.48)
- - - - 0.07 - -4.32 - - - -18.66 0.34 3.25 -0.82 1.54 - - - - - - 2.73
AMTR_s00102p00100280 (evm_27.TU.AmTr_v1.0_scaffold00102.52)
- - - - -1.02 - - - - -6.77 0.69 0.7 3.31 -3.37 -2.16 -0.19 -0.41 -1.82 -1.33 1.06 -1.97 1.75
AMTR_s00109p00111130 (evm_27.TU.AmTr_v1.0_scaffold00109.106)
- - - - 2.26 - - - - 2.39 - - 2.21 - 2.87 - - - - - - -
AMTR_s00111p00130900 (evm_27.TU.AmTr_v1.0_scaffold00111.108)
- - - - 3.87 - 2.05 - 1.67 - - - - - - - - - - - - -
AMTR_s00114p00147940 (evm_27.TU.AmTr_v1.0_scaffold00114.67)
- - - - 3.97 - - - - - - - 2.66 - - - - - - - - -
AMTR_s00126p00041860 (evm_27.TU.AmTr_v1.0_scaffold00126.11)
- - - - 4.02 - 2.53 - - - - - - - - - - - - - - -
AMTR_s00126p00069040 (evm_27.TU.AmTr_v1.0_scaffold00126.28)
- - - - 3.93 - - - - - - - 2.75 - - - - - - - - -
AMTR_s00129p00068690 (evm_27.TU.AmTr_v1.0_scaffold00129.43)
- - - - 4.01 - - - - - - - 2.16 - - - - - - - - 0.52
AMTR_s00134p00028350 (evm_27.TU.AmTr_v1.0_scaffold00134.7)
- - - - 3.37 - - - 2.29 - - - 2.76 - - - - - - - - -
AMTR_s00138p00070850 (evm_27.TU.AmTr_v1.0_scaffold00138.41)
- - - - 1.92 - - - - 2.07 - - 3.48 - 1.52 - - - - - - -
AMTR_s00140p00094780 (evm_27.TU.AmTr_v1.0_scaffold00140.42)
-2.08 - -1.17 - -0.2 - - - - - 0.36 1.54 3.72 - 0.23 0.0 -1.45 - - -3.73 - -1.09
AMTR_s00148p00087220 (evm_27.TU.AmTr_v1.0_scaffold00148.58)
0.38 1.4 -4.53 -6.82 -3.79 -5.49 -9.53 - -10.58 - -0.43 -2.34 3.92 -4.17 -2.64 -7.15 -5.03 -6.78 -7.76 -5.84 - 0.63
AMTR_s00154p00038890 (evm_27.TU.AmTr_v1.0_scaffold00154.21)
- - - - 3.98 - 2.62 - - - - - - - - - - - - - - -
AMTR_s00162p00083730 (evm_27.TU.AmTr_v1.0_scaffold00162.39)
-1.67 -1.55 -4.03 - -10.21 -10.37 -11.84 - -11.47 -13.19 0.0 -10.27 4.34 -3.68 -9.65 -9.25 - - -9.3 -12.34 - -14.57
AMTR_s00179p00033070 (evm_27.TU.AmTr_v1.0_scaffold00179.6)
- - - - 4.05 - - - - - - - 2.45 - - - - - - - - -
AMTR_s00189p00031800 (evm_27.TU.AmTr_v1.0_scaffold00189.2)
- - - - 3.31 - - - - - - - 3.4 - 0.58 - - - - - - -
AMTR_s00244p00012340 (evm_27.TU.AmTr_v1.0_scaffold00244.2)
0.09 - -0.87 -1.99 2.78 1.42 -2.81 - - - 0.26 - 2.65 - -1.19 - - - 0.68 -0.12 - -
AMTR_s00339p00005540 (evm_27.TU.AmTr_v1.0_scaffold00339.1)
-3.53 0.19 - - -3.86 - -7.59 - -3.58 -4.44 0.61 1.48 2.69 0.93 -1.35 - 0.73 0.21 -1.14 -3.42 - 2.06
AMTR_s00711p00011340 (evm_27.TU.AmTr_v1.0_scaffold00711.2)
-0.24 0.95 -6.54 - -4.01 - -7.02 -4.08 -3.61 -3.7 -0.13 0.89 2.81 0.9 -1.2 -3.98 -0.78 -0.22 -0.51 -3.14 -5.57 2.17
AMTR_s00739p00009270 (evm_27.TU.AmTr_v1.0_scaffold00739.1)
- - - - -0.32 - - - - - - - 4.2 - - - - - - 1.5 - -
AMTR_s00948p00010970 (evm_27.TU.AmTr_v1.0_scaffold00948.1)
- - - - 2.7 - - -0.79 - -1.55 - - 3.5 -1.47 -0.59 - - - - -0.61 - 0.69
AMTR_s01132p00003780 (evm_27.TU.AmTr_v1.0_scaffold01132.1)
- - 2.81 - 0.63 - -3.02 - - - - - 2.94 - - - - - - - - 2.5
AMTR_s05456p00002370 (evm_27.TU.AmTr_v1.0_scaffold05456.1)
- - - - 3.02 - 0.15 - 1.82 1.03 - - 2.67 - -0.28 - - - - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.