GO:0003700: DNA-binding transcription factor activity (Molecular function)

"A transcription regulator activity that modulates transcription of gene sets via selective and non-covalent binding to a specific double-stranded genomic DNA sequence (sometimes referred to as a motif) within a cis-regulatory region. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons." [GOC:txnOH-2018]


There are 4381 sequences with this label.

Enriched clusters
Name Species % in cluster p-value corrected p-value action
Cluster_140 Amborella trichopoda 7.23 % 0.000116 0.017749
Cluster_146 Amborella trichopoda 4.68 % 0.000188 0.000939
Cluster_108 Amborella trichopoda 12.07 % 1e-06 0.000166
Cluster_194 Amborella trichopoda 6.76 % 0.000595 0.022117
Cluster_227 Amborella trichopoda 9.26 % 0.000135 0.001361
Cluster_100 Arabidopsis thaliana 17.86 % 0.001745 0.00854
Cluster_205 Arabidopsis thaliana 30.0 % 0.0 1e-06
Cluster_197 Arabidopsis thaliana 14.77 % 0.002347 0.02467
Cluster_121 Arabidopsis thaliana 16.44 % 0.001343 0.013545
Cluster_252 Arabidopsis thaliana 16.67 % 0.000195 0.037865
Cluster_18 Arabidopsis thaliana 10.71 % 0.013111 0.045091
Cluster_204 Arabidopsis thaliana 15.87 % 0.004275 0.031683
Cluster_224 Arabidopsis thaliana 21.31 % 5.8e-05 0.007632
Cluster_148 Arabidopsis thaliana 17.45 % 1e-06 8e-06
Cluster_95 Arabidopsis thaliana 15.22 % 0.001213 0.013074
Cluster_145 Arabidopsis thaliana 16.67 % 1.4e-05 0.000352
Cluster_215 Arabidopsis thaliana 12.04 % 0.001258 0.01116
Cluster_84 Arabidopsis thaliana 20.83 % 0.000497 0.009724
Cluster_80 Arabidopsis thaliana 26.26 % 0.0 0.0
Cluster_42 Arabidopsis thaliana 20.0 % 3.6e-05 0.010397
Cluster_240 Arabidopsis thaliana 16.67 % 0.00297 0.018305
Cluster_125 Arabidopsis thaliana 23.68 % 0.0 1e-06
Cluster_102 Chlamydomonas reinhardtii 4.17 % 0.00576 0.035715
Cluster_14 Chlamydomonas reinhardtii 4.69 % 0.000465 0.003132
Cluster_126 Chlamydomonas reinhardtii 3.92 % 0.006482 0.016668
Cluster_188 Chlamydomonas reinhardtii 16.67 % 0.014123 0.044721
Cluster_330 Gingko biloba 4.94 % 0.00187 0.024936
Cluster_50 Gingko biloba 6.25 % 0.000778 0.005054
Cluster_69 Gingko biloba 10.42 % 0.0 0.0
Cluster_556 Gingko biloba 33.33 % 0.019123 0.030422
Cluster_166 Gingko biloba 8.47 % 3.9e-05 0.00035
Cluster_26 Gingko biloba 5.26 % 0.000379 0.023478
Cluster_89 Gingko biloba 7.11 % 0.0 0.0
Cluster_231 Gingko biloba 5.75 % 0.000252 0.016741
Cluster_257 Gingko biloba 4.62 % 0.008507 0.012894
Cluster_219 Gingko biloba 17.65 % 0.0 0.0
Cluster_162 Gingko biloba 4.08 % 0.003731 0.013887
Cluster_77 Gingko biloba 9.71 % 0.0 0.0
Cluster_22 Gingko biloba 10.67 % 0.0 5e-06
Cluster_136 Gingko biloba 4.59 % 0.00071 0.035029
Cluster_14 Marchantia polymorpha 5.63 % 0.0 1.4e-05
Cluster_115 Oryza sativa 6.33 % 0.001415 0.023898
Cluster_39 Oryza sativa 10.34 % 3.1e-05 0.000853
Cluster_131 Oryza sativa 3.32 % 0.006804 0.027215
Cluster_15 Oryza sativa 4.48 % 0.002846 0.040989
Cluster_340 Oryza sativa 12.77 % 9e-06 0.000517
Cluster_196 Oryza sativa 4.93 % 2.5e-05 0.005871
Cluster_140 Oryza sativa 5.97 % 0.005248 0.016639
Cluster_105 Oryza sativa 6.78 % 0.003325 0.007707
Cluster_252 Oryza sativa 11.54 % 0.0 0.0
Cluster_336 Oryza sativa 8.93 % 0.000291 0.034088
Cluster_652 Oryza sativa 80.0 % 0.0 1e-06
Cluster_310 Oryza sativa 9.38 % 5.5e-05 0.005618
Cluster_193 Oryza sativa 7.41 % 0.002406 0.034001
Cluster_147 Oryza sativa 5.95 % 0.001858 0.020069
Cluster_302 Oryza sativa 5.1 % 0.003634 0.032512
Cluster_73 Oryza sativa 3.43 % 0.005691 0.027607
Cluster_307 Oryza sativa 6.41 % 0.001337 0.008466
Cluster_254 Oryza sativa 4.4 % 0.001431 0.006342
Cluster_216 Oryza sativa 4.44 % 6.5e-05 0.001168
Cluster_272 Oryza sativa 6.15 % 0.004711 0.022326
Cluster_77 Oryza sativa 5.11 % 0.000599 0.002396
Cluster_651 Oryza sativa 100.0 % 0.000108 0.001506
Cluster_143 Oryza sativa 8.14 % 3.3e-05 0.00029
Cluster_42 Oryza sativa 5.71 % 2e-06 9.9e-05
Cluster_37 Physcomitrella patens 4.88 % 1e-06 4.5e-05
Cluster_80 Physcomitrella patens 1.23 % 0.010593 0.023646
Cluster_317 Physcomitrella patens 50.0 % 0.001909 0.024821
Cluster_44 Picea abies 10.44 % 0.0 0.0
Cluster_12 Picea abies 5.11 % 2e-06 0.000299
Cluster_328 Picea abies 7.27 % 0.000442 0.00599
Cluster_434 Picea abies 4.72 % 0.000636 0.011731
Cluster_378 Picea abies 12.24 % 0.0 0.0
Cluster_41 Picea abies 4.04 % 4.8e-05 0.000452
Cluster_1179 Picea abies 100.0 % 4.1e-05 0.000185
Cluster_427 Picea abies 6.0 % 0.004124 0.018884
Cluster_215 Picea abies 5.36 % 0.00567 0.027719
Cluster_115 Picea abies 4.9 % 0.000534 0.009608
Cluster_298 Picea abies 3.61 % 0.000282 0.003012
Cluster_743 Picea abies 28.57 % 0.000846 0.011847
Cluster_151 Picea abies 4.48 % 0.000244 0.00731
Cluster_24 Picea abies 3.05 % 0.001822 0.013286
Cluster_251 Picea abies 6.45 % 0.000698 0.003104
Cluster_428 Picea abies 7.46 % 7.4e-05 0.004015
Cluster_657 Picea abies 33.33 % 0.019147 0.026457
Cluster_267 Picea abies 8.2 % 4.7e-05 0.005058
Cluster_110 Picea abies 2.9 % 0.00102 0.010096
Cluster_287 Picea abies 4.44 % 0.000254 0.006776
Cluster_1 Selaginella moellendorffii 1.03 % 7.6e-05 0.010589
Cluster_117 Solanum lycopersicum 4.05 % 0.004204 0.023398
Cluster_46 Solanum lycopersicum 7.27 % 4.4e-05 0.000284
Cluster_165 Solanum lycopersicum 4.85 % 0.007071 0.038388
Cluster_141 Solanum lycopersicum 15.04 % 0.0 0.0
Cluster_72 Solanum lycopersicum 4.7 % 0.000101 0.000786
Cluster_232 Solanum lycopersicum 8.42 % 1.5e-05 0.001135
Cluster_304 Solanum lycopersicum 100.0 % 0.000134 0.002949
Cluster_10 Solanum lycopersicum 8.14 % 6.5e-05 0.012597
Cluster_87 Solanum lycopersicum 6.49 % 2e-06 0.000511
Cluster_12 Solanum lycopersicum 5.08 % 2.3e-05 0.00379
Cluster_164 Solanum lycopersicum 10.34 % 5.7e-05 0.008584
Cluster_140 Vitis vinifera 6.82 % 0.00025 0.00507
Cluster_48 Vitis vinifera 6.67 % 0.000916 0.027034
Cluster_171 Vitis vinifera 7.14 % 0.000669 0.001836
Cluster_206 Vitis vinifera 13.33 % 5e-06 0.0005
Cluster_9 Vitis vinifera 22.22 % 0.0 0.0
Cluster_89 Vitis vinifera 7.46 % 0.000547 0.009609
Cluster_92 Vitis vinifera 7.14 % 5.7e-05 0.001526
Cluster_111 Vitis vinifera 14.55 % 0.0 5e-06
Cluster_339 Zea mays 7.5 % 0.000412 0.014202
Cluster_169 Zea mays 6.6 % 0.000302 0.002654
Cluster_330 Zea mays 7.41 % 0.00044 0.007923
Cluster_144 Zea mays 6.17 % 0.00296 0.017364
Cluster_236 Zea mays 5.77 % 0.000121 0.001214
Cluster_61 Zea mays 8.55 % 0.0 1e-06
Cluster_181 Zea mays 16.22 % 0.0 0.0
Cluster_121 Zea mays 11.43 % 0.0 0.0
Cluster_17 Zea mays 3.88 % 0.0021 0.013522
Cluster_918 Zea mays 100.0 % 0.000144 0.003163
Cluster_243 Zea mays 9.38 % 0.000121 0.002586
Cluster_322 Zea mays 10.14 % 2e-05 0.000102
Cluster_40 Zea mays 4.69 % 0.004597 0.043289
Cluster_305 Zea mays 9.18 % 3e-06 0.00045
Cluster_193 Zea mays 4.5 % 0.011072 0.030565
Cluster_230 Zea mays 19.48 % 0.0 0.0
Cluster_113 Zea mays 8.72 % 0.0 5e-06
Cluster_139 Zea mays 5.49 % 0.004875 0.020365
Cluster_254 Zea mays 5.88 % 0.003645 0.027213
Cluster_253 Zea mays 6.49 % 0.002373 0.009243
Cluster_80 Zea mays 4.42 % 0.011894 0.048937
Cluster_179 Zea mays 8.62 % 0.000663 0.004142
Cluster_43 Zea mays 6.47 % 5e-05 0.000331
Cluster_136 Zea mays 7.94 % 0.000968 0.005275
Sequences (4381) (download table)

Info: GO-associations disabled for items with more than 300 associated sequences !
InterPro Domains

Family Terms