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  3. GO:0043565

GO:0043565: sequence-specific DNA binding (Molecular function)

"Interacting selectively and non-covalently with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding." [GOC:jl]


There are 1281 sequences with this label.

Enriched clusters
Name Species % in cluster p-value corrected p-value action
Cluster_199 Amborella trichopoda 3.66 % 0.012464 0.045701
Cluster_227 Amborella trichopoda 9.26 % 1.6e-05 0.000251
Cluster_197 Arabidopsis thaliana 3.41 % 0.004743 0.044582
Cluster_262 Arabidopsis thaliana 3.77 % 0.017661 0.045668
Cluster_14 Chlamydomonas reinhardtii 3.12 % 0.001683 0.010255
Cluster_126 Chlamydomonas reinhardtii 3.92 % 0.001072 0.003141
Cluster_20 Cyanophora paradoxa 1.74 % 2.7e-05 0.006269
Cluster_50 Gingko biloba 4.69 % 0.000248 0.001899
Cluster_26 Gingko biloba 3.16 % 0.000791 0.024523
Cluster_89 Gingko biloba 2.03 % 0.000543 0.002098
Cluster_219 Gingko biloba 2.94 % 0.007397 0.030974
Cluster_14 Marchantia polymorpha 2.82 % 3.6e-05 0.00088
Cluster_39 Oryza sativa 8.62 % 9e-06 0.000959
Cluster_340 Oryza sativa 8.51 % 7.6e-05 0.000412
Cluster_283 Oryza sativa 5.56 % 0.00221 0.01249
Cluster_652 Oryza sativa 40.0 % 0.000224 0.000508
Cluster_686 Oryza sativa 50.0 % 0.009506 0.048888
Cluster_193 Oryza sativa 5.56 % 0.00221 0.036037
Cluster_147 Oryza sativa 5.95 % 5.3e-05 0.008606
Cluster_307 Oryza sativa 3.85 % 0.006235 0.026924
Cluster_86 Oryza sativa 2.13 % 0.012775 0.04126
Cluster_187 Oryza sativa 6.35 % 0.000239 0.016734
Cluster_216 Oryza sativa 2.42 % 0.001272 0.01897
Cluster_77 Oryza sativa 2.92 % 0.004289 0.016483
Cluster_651 Oryza sativa 100.0 % 2.3e-05 0.000632
Cluster_42 Oryza sativa 2.86 % 0.000538 0.002455
Cluster_150 Physcomitrella patens 1.06 % 0.017252 0.042792
Cluster_461 Picea abies 3.12 % 0.007141 0.016893
Cluster_177 Picea abies 3.77 % 0.00495 0.018
Cluster_1179 Picea abies 100.0 % 4e-06 0.000138
Cluster_215 Picea abies 3.57 % 0.005511 0.028526
Cluster_115 Picea abies 2.94 % 0.001106 0.009955
Cluster_298 Picea abies 2.06 % 0.000612 0.004297
Cluster_743 Picea abies 28.57 % 8e-05 0.002241
Cluster_24 Picea abies 3.05 % 3e-06 3.1e-05
Cluster_491 Picea abies 3.57 % 0.005511 0.017339
Cluster_529 Picea abies 5.17 % 0.000212 0.017361
Cluster_287 Picea abies 2.96 % 0.000155 0.005785
Cluster_100 Solanum lycopersicum 2.68 % 0.001953 0.007301
Cluster_141 Solanum lycopersicum 8.85 % 0.0 0.0
Cluster_232 Solanum lycopersicum 6.32 % 1.9e-05 0.00094
Cluster_173 Solanum lycopersicum 5.17 % 0.004584 0.044919
Cluster_12 Solanum lycopersicum 3.39 % 7.2e-05 0.002986
Cluster_139 Solanum lycopersicum 3.2 % 0.00599 0.036935
Cluster_70 Vitis vinifera 4.03 % 0.000183 0.047834
Cluster_171 Vitis vinifera 5.71 % 0.000221 0.000672
Cluster_215 Vitis vinifera 3.45 % 0.005968 0.031367
Cluster_92 Vitis vinifera 5.1 % 6e-05 0.001387
Cluster_111 Vitis vinifera 14.55 % 0.0 0.0
Cluster_339 Zea mays 3.75 % 0.010279 0.044328
Cluster_169 Zea mays 3.77 % 0.003009 0.011032
Cluster_61 Zea mays 3.29 % 0.001686 0.007033
Cluster_202 Zea mays 6.12 % 0.002615 0.028529
Cluster_280 Zea mays 3.96 % 0.002527 0.011371
Cluster_157 Zea mays 8.47 % 2e-05 0.001745
Cluster_349 Zea mays 4.62 % 0.005808 0.027952
Cluster_322 Zea mays 8.7 % 3e-06 1.4e-05
Cluster_168 Zea mays 4.92 % 0.004864 0.027315
Cluster_230 Zea mays 14.29 % 0.0 0.0
Cluster_113 Zea mays 5.37 % 2e-06 2.5e-05
Cluster_179 Zea mays 6.9 % 0.000316 0.002082
Cluster_43 Zea mays 5.04 % 1.4e-05 0.000105
Cluster_136 Zea mays 4.76 % 0.005324 0.025229
Sequences (1281) (download table)

Info: GO-associations disabled for items with more than 300 associated sequences !
InterPro Domains

Family Terms