"sequence_id","alias","species","description","type"
"AT1G01210","No alias","Arabidopsis thaliana","DNA-directed RNA polymerase, subunit M, archaeal","protein_coding"
"AT1G06790","No alias","Arabidopsis thaliana","RNA polymerase Rpb7 N-terminal domain-containing protein","protein_coding"
"AT1G08540","ATSIG1","Arabidopsis thaliana","RNApolymerase sigma subunit 2","protein_coding"
"AT1G11475","NRPB10","Arabidopsis thaliana","RNA polymerases N / 8 kDa subunit","protein_coding"
"AT1G29940","NRPA2","Arabidopsis thaliana","nuclear RNA polymerase A2","protein_coding"
"AT1G30680","No alias","Arabidopsis thaliana","toprim domain-containing protein","protein_coding"
"AT1G53690","No alias","Arabidopsis thaliana","DNA directed RNA polymerase, 7 kDa subunit","protein_coding"
"AT1G54250","ATRPABC16.5","Arabidopsis thaliana","RNA polymerase Rpb8","protein_coding"
"AT1G60620","RPAC43","Arabidopsis thaliana","RNA polymerase I subunit 43","protein_coding"
"AT1G60850","ATRPAC42","Arabidopsis thaliana","DNA-directed RNA polymerase family protein","protein_coding"
"AT1G61700","No alias","Arabidopsis thaliana","RNA polymerases N / 8 kDa subunit","protein_coding"
"AT1G63020","NRPD1A","Arabidopsis thaliana","nuclear RNA polymerase D1A","protein_coding"
"AT1G64860","SIGB","Arabidopsis thaliana","sigma factor A","protein_coding"
"AT1G67320","No alias","Arabidopsis thaliana","DNA primase, large subunit family","protein_coding"
"AT1G68990","MGP3","Arabidopsis thaliana","male gametophyte defective 3","protein_coding"
"AT2G04630","NRPB6B","Arabidopsis thaliana","RNA polymerase Rpb6","protein_coding"
"AT2G15400","NRPE3B","Arabidopsis thaliana","DNA-directed RNA polymerase family protein","protein_coding"
"AT2G15430","NRPB3","Arabidopsis thaliana","DNA-directed RNA polymerase family protein","protein_coding"
"AT2G24120","PDE319","Arabidopsis thaliana","DNA/RNA polymerases superfamily protein","protein_coding"
"AT2G29540","ATRPC14","Arabidopsis thaliana","RNApolymerase 14 kDa subunit","protein_coding"
"AT2G36990","SIGF","Arabidopsis thaliana","RNApolymerase sigma-subunit F","protein_coding"
"AT2G40030","DRD3","Arabidopsis thaliana","nuclear RNA polymerase D1B","protein_coding"
"AT2G41340","RPB5D","Arabidopsis thaliana","RNA polymerase II fifth largest subunit, D","protein_coding"
"AT3G16980","NRPE9A","Arabidopsis thaliana","RNA polymerases M/15 Kd subunit","protein_coding"
"AT3G18090","NRPD2B","Arabidopsis thaliana","nuclear RNA polymerase D2B","protein_coding"
"AT3G22320","NRPD5","Arabidopsis thaliana","Eukaryotic rpb5 RNA polymerase subunit family protein","protein_coding"
"AT3G22900","NRPD7","Arabidopsis thaliana","RNA polymerase Rpb7-like, N-terminal domain","protein_coding"
"AT3G23780","DRD2","Arabidopsis thaliana","nuclear RNA polymerase D2A","protein_coding"
"AT3G49000","No alias","Arabidopsis thaliana","RNA polymerase III subunit RPC82 family protein","protein_coding"
"AT3G52090","NRPE11","Arabidopsis thaliana","DNA-directed RNA polymerase, RBP11-like","protein_coding"
"AT3G53920","SIGC","Arabidopsis thaliana","RNApolymerase sigma-subunit C","protein_coding"
"AT3G54490","RPB5E","Arabidopsis thaliana","RNA polymerase II fifth largest subunit, E","protein_coding"
"AT3G57080","RPB5B","Arabidopsis thaliana","Eukaryotic rpb5 RNA polymerase subunit family protein","protein_coding"
"AT3G57660","NRPA1","Arabidopsis thaliana","nuclear RNA polymerase A1","protein_coding"
"AT3G59600","NRPE8B","Arabidopsis thaliana","RNA polymerase Rpb8","protein_coding"
"AT4G07950","No alias","Arabidopsis thaliana","DNA-directed RNA polymerase, subunit M, archaeal","protein_coding"
"AT4G14660","NRPE7","Arabidopsis thaliana","RNA polymerase Rpb7-like, N-terminal domain","protein_coding"
"AT4G16265","NRPE9B","Arabidopsis thaliana","RNA polymerases M/15 Kd subunit","protein_coding"
"AT4G21710","EMB1989","Arabidopsis thaliana","DNA-directed RNA polymerase family protein","protein_coding"
"AT4G25180","No alias","Arabidopsis thaliana","RNA polymerase III RPC4","protein_coding"
"AT4G35800","RNA_POL_II_LSRNA_POL_II_LS","Arabidopsis thaliana","RNA polymerase II large subunit","protein_coding"
"AT5G09380","No alias","Arabidopsis thaliana","RNA polymerase III RPC4","protein_coding"
"AT5G09920","RPB15.9","Arabidopsis thaliana","RNA polymerase II, Rpb4, core protein","protein_coding"
"AT5G13730","SIGD","Arabidopsis thaliana","sigma factor 4","protein_coding"
"AT5G15700","No alias","Arabidopsis thaliana","DNA/RNA polymerases superfamily protein","protein_coding"
"AT5G24120","ATSIG5","Arabidopsis thaliana","sigma factor E","protein_coding"
"AT5G41010","NRPD12","Arabidopsis thaliana","DNA directed RNA polymerase, 7 kDa subunit","protein_coding"
"AT5G41880","POLA4","Arabidopsis thaliana","DNA primases;DNA primases","protein_coding"
"AT5G45140","NRPC2","Arabidopsis thaliana","nuclear RNA polymerase C2","protein_coding"
"AT5G51940","NRPE6A","Arabidopsis thaliana","RNA polymerase Rpb6","protein_coding"
"AT5G57980","RPB5C","Arabidopsis thaliana","RNA polymerase II fifth largest subunit, C","protein_coding"
"AT5G59180","NRPB7","Arabidopsis thaliana","DNA-directed RNA polymerase II","protein_coding"
"AT5G60040","NRPC1","Arabidopsis thaliana","nuclear RNA polymerase C1","protein_coding"
"ATCG00170","RPOC2","Arabidopsis thaliana","DNA-directed RNA polymerase family protein","protein_coding"
"ATCG00180","RPOC1","Arabidopsis thaliana","DNA-directed RNA polymerase family protein","protein_coding"
"ATCG00190","RPOB","Arabidopsis thaliana","RNA polymerase subunit beta","protein_coding"
"ATCG00740","RPOA","Arabidopsis thaliana","RNA polymerase subunit alpha","protein_coding"
"Cpa|evm.model.tig00000076.86","No alias","Cyanophora paradoxa ","27.2 RNA.transcription RNA polymerase Rpb7 N-terminal domain-containing protein","protein_coding"
"Cpa|evm.model.tig00000158.16","No alias","Cyanophora paradoxa ","27.2 RNA.transcription Encodes the unique second-largest subunit of DNA-dependent RNA polymerase II the ortholog of budding yeast RPB2 and a homolog of the E. coli RNA polymerase beta subunit. NRPB2","protein_coding"
"Cpa|evm.model.tig00000203.25","No alias","Cyanophora paradoxa ","27.2 RNA.transcription Encodes a subunit of RNA polymerase I (aka RNA polymerase A). nuclear RNA polymerase A1 (NRPA1)","protein_coding"
"Cpa|evm.model.tig00000241.15","No alias","Cyanophora paradoxa ","27.2 RNA.transcription Encodes the unique largest subunit of nuclear DNA-dependent RNA polymerase II the ortholog of budding yeast RPB1 and a homolog of the E. coli RNA polymerase beta prime subunit. RNA polymerase II large subunit (NRPB1)","protein_coding"
"Cpa|evm.model.tig00000342.9","No alias","Cyanophora paradoxa ","28.1 DNA.synthesis/chromatin structure POLA3","protein_coding"
"Cpa|evm.model.tig00000553.15","No alias","Cyanophora paradoxa ","No description available","protein_coding"
"Cpa|evm.model.tig00000704.30","No alias","Cyanophora paradoxa ","27.2 RNA.transcription Non-catalytic subunit of nuclear DNA-dependent RNA polymerases II, IV and V homologous to budding yeast RPB3 and the E. coli RNA polymerase alpha subunit. A closely related paralog, encoded by At2g15400, can substitute for At2g15430 in the context of Pol V. NRPB3","protein_coding"
"Cpa|evm.model.tig00000865.68","No alias","Cyanophora paradoxa ","No description available","protein_coding"
"Cpa|evm.model.tig00001086.29","No alias","Cyanophora paradoxa ","No description available","protein_coding"
"Cpa|evm.model.tig00020554.10","No alias","Cyanophora paradoxa ","27.2 RNA.transcription Encodes a subunit of RNA polymerase III (aka RNA polymerase C). nuclear RNA polymerase C2 (NRPC2)","protein_coding"
"Cpa|evm.model.tig00020554.23","No alias","Cyanophora paradoxa ","27.2 RNA.transcription Protein of unknown function that is homologous to the At1g11475 locus that encodes a non-catalytic subunit common to nuclear DNA-dependent RNA polymerases II, IV and V. Homologous to budding yeast RPB10. RNA polymerases N / 8 kDa subunit","protein_coding"
"Cpa|evm.model.tig00020554.9","No alias","Cyanophora paradoxa ","27.2 RNA.transcription Encodes a subunit of RNA polymerase III (aka RNA polymerase C). nuclear RNA polymerase C2 (NRPC2)","protein_coding"
"Cpa|evm.model.tig00020614.124","No alias","Cyanophora paradoxa ","27.2 RNA.transcription Encodes a subunit of RNA polymerase III (aka RNA polymerase C). nuclear RNA polymerase C2 (NRPC2)","protein_coding"
"Cpa|evm.model.tig00020614.125","No alias","Cyanophora paradoxa ","No description available","protein_coding"
"Cpa|evm.model.tig00020614.126","No alias","Cyanophora paradoxa ","27.2 RNA.transcription Encodes a subunit of RNA polymerase III (aka RNA polymerase C). nuclear RNA polymerase C2 (NRPC2)","protein_coding"
"Cpa|evm.model.tig00020614.127","No alias","Cyanophora paradoxa ","27.2 RNA.transcription Encodes a subunit of RNA polymerase III (aka RNA polymerase C). nuclear RNA polymerase C2 (NRPC2)","protein_coding"
"Cpa|evm.model.tig00020675.101","No alias","Cyanophora paradoxa ","No description available","protein_coding"
"Cpa|evm.model.tig00020848.19","No alias","Cyanophora paradoxa ","27.2 RNA.transcription RNA polymerase I subunit 43 (RPAC43)","protein_coding"
"Cpa|evm.model.tig00020848.68","No alias","Cyanophora paradoxa ","28.1 DNA.synthesis/chromatin structure DNA primase, large subunit family","protein_coding"
"Cpa|evm.model.tig00021221.7","No alias","Cyanophora paradoxa ","27.2 RNA.transcription RNA polymerase III subunit RPC82 family protein","protein_coding"
"Cpa|evm.model.tig00021348.37","No alias","Cyanophora paradoxa ","27.2 RNA.transcription Encodes a subunit of RNA polymerase 1 (aka RNA polymerase A). nuclear RNA polymerase A2 (NRPA2)","protein_coding"
"Cpa|evm.model.tig00021348.38","No alias","Cyanophora paradoxa ","27.2 RNA.transcription Encodes a subunit of RNA polymerase 1 (aka RNA polymerase A). nuclear RNA polymerase A2 (NRPA2)","protein_coding"
"Cpa|evm.model.tig00021493.49","No alias","Cyanophora paradoxa ","27.2 RNA.transcription SCABRA 3 (SCA3)","protein_coding"
"Cpa|evm.model.tig00021582.9","No alias","Cyanophora paradoxa ","27.2 RNA.transcription Non-catalytic subunit common to DNA-dependent RNA polymerases I, II, III and IV homologous to budding yeast RPB5. NRPB5","protein_coding"
"Cpa|evm.model.tig00021589.12","No alias","Cyanophora paradoxa ","27.2 RNA.transcription One of two highly similar proteins that can serve as a non-catalytic subunit of nuclear DNA-dependent RNA polymerases II, IV and V homologous to budding yeast RPB6 and the E. coli RNA polymerase omega subunit. Probably redundant with At2g04630. NRPB6A","protein_coding"
"Cpa|evm.model.tig00022075.5","No alias","Cyanophora paradoxa ","27.2 RNA.transcription Encodes a subunit of RNA polymerase III (aka RNA polymerase C). nuclear RNA polymerase C1 (NRPC1)","protein_coding"
"Cpa|evm.model.tig00022075.6","No alias","Cyanophora paradoxa ","27.2 RNA.transcription Encodes a subunit of RNA polymerase III (aka RNA polymerase C). nuclear RNA polymerase C1 (NRPC1)","protein_coding"
"Cre01.g002200","No alias","Chlamydomonas reinhardtii","27.2 RNA.transcription One of two highly similar proteins that can serve as a non-catalytic subunit of nuclear DNA-dependent RNA polymerases II, IV and V homologous to budding yeast RPB6 and the E. coli RNA polymerase omega subunit. Probably redundant with At2g04630. NRPB6A","protein_coding"
"Cre01.g070567","No alias","Chlamydomonas reinhardtii","No description available","protein_coding"
"Cre02.g075600","No alias","Chlamydomonas reinhardtii","27.2 RNA.transcription Nucleus  encoded plastid RNA polymerase. Localized in mitochondria and chloroplast. DNA/RNA polymerases superfamily protein","protein_coding"
"Cre02.g086750","No alias","Chlamydomonas reinhardtii","No description available","protein_coding"
"Cre03.g165750","No alias","Chlamydomonas reinhardtii","27.2 RNA.transcription Encodes a subunit of RNA polymerase III (aka RNA polymerase C). nuclear RNA polymerase C1 (NRPC1)","protein_coding"
"Cre06.g293000","No alias","Chlamydomonas reinhardtii","28.1 DNA.synthesis/chromatin structure DNA primase, large subunit family","protein_coding"
"Cre07.g312350","No alias","Chlamydomonas reinhardtii","28.1 DNA.synthesis/chromatin structure POLA3","protein_coding"
"Cre07.g313302","No alias","Chlamydomonas reinhardtii","27.2 RNA.transcription RNA polymerase I subunit 43 (RPAC43)","protein_coding"
"Cre07.g322176","No alias","Chlamydomonas reinhardtii","27.2 RNA.transcription Encodes a subunit of RNA polymerase 1 (aka RNA polymerase A). nuclear RNA polymerase A2 (NRPA2)","protein_coding"
"Cre07.g342352","No alias","Chlamydomonas reinhardtii","No description available","protein_coding"
"Cre08.g361800","No alias","Chlamydomonas reinhardtii","No description available","protein_coding"
"Cre09.g403219","No alias","Chlamydomonas reinhardtii","27.2 RNA.transcription Non-catalytic subunit common to DNA-dependent RNA polymerases I, II, III and IV homologous to budding yeast RPB5. NRPB5","protein_coding"
"Cre10.g419750","No alias","Chlamydomonas reinhardtii","27.2 RNA.transcription Non-catalytic subunit of nuclear DNA-dependent RNA polymerases II, IV and V homologous to budding yeast RPB3 and the E. coli RNA polymerase alpha subunit. A closely related paralog, encoded by At2g15400, can substitute for At2g15430 in the context of Pol V. NRPB3","protein_coding"
"Cre10.g454650","No alias","Chlamydomonas reinhardtii","27.2 RNA.transcription SIN-like family protein Has 1807","protein_coding"
"Cre12.g497400","No alias","Chlamydomonas reinhardtii","No description available","protein_coding"
"Cre12.g529600","No alias","Chlamydomonas reinhardtii","27.2 RNA.transcription Encodes a subunit of RNA polymerase I (aka RNA polymerase A). nuclear RNA polymerase A1 (NRPA1)","protein_coding"
"Cre12.g538400","No alias","Chlamydomonas reinhardtii","27.2 RNA.transcription RNA polymerase Rpb7 N-terminal domain-containing protein","protein_coding"
"Cre12.g542800","No alias","Chlamydomonas reinhardtii","27.2 RNA.transcription Encodes a subunit of RNA polymerase III (aka RNA polymerase C). nuclear RNA polymerase C2 (NRPC2)","protein_coding"
"Cre13.g571650","No alias","Chlamydomonas reinhardtii","27.2 RNA.transcription Protein of unknown function that is homologous to the At1g11475 locus that encodes a non-catalytic subunit common to nuclear DNA-dependent RNA polymerases II, IV and V. Homologous to budding yeast RPB10. RNA polymerases N / 8 kDa subunit","protein_coding"
"Cre16.g667750","No alias","Chlamydomonas reinhardtii","27.2 RNA.transcription Non-catalytic subunit specific to DNA-directed RNA polymerase II the ortholog of budding yeast RPB7 NRPB7","protein_coding"
"Cre16.g673900","No alias","Chlamydomonas reinhardtii","27.2 RNA.transcription RNA polymerase III subunit RPC82 family protein","protein_coding"
"Cre16.g680900","No alias","Chlamydomonas reinhardtii","27.2 RNA.transcription Encodes the unique largest subunit of nuclear DNA-dependent RNA polymerase II the ortholog of budding yeast RPB1 and a homolog of the E. coli RNA polymerase beta prime subunit. RNA polymerase II large subunit (NRPB1)","protein_coding"
"GSVIVT01000665001","No alias","Vitis vinifera","27.2 RNA.transcription NRPE5-like protein of unknown function homologous to budding yeast RPB5 "RNA polymerase II fifth largest subunit, E" (RPB5E)","protein_coding"
"GSVIVT01000730001","No alias","Vitis vinifera","27.2 RNA.transcription RNA polymerase Rpb7 N-terminal domain-containing protein","protein_coding"
"GSVIVT01000731001","No alias","Vitis vinifera","27.2 RNA.transcription RNA polymerase Rpb7 N-terminal domain-containing protein","protein_coding"
"GSVIVT01003174001","No alias","Vitis vinifera","27.2 RNA.transcription Non-catalytic subunit of nuclear DNA-dependent RNA polymerases II, IV and V homologous to budding yeast RPB3 and the E. coli RNA polymerase alpha subunit. A closely related paralog, encoded by At2g15400, can substitute for At2g15430 in the context of Pol V. NRPB3","protein_coding"
"GSVIVT01004486001","No alias","Vitis vinifera","27.2 RNA.transcription RNA polymerase Rpb7 N-terminal domain-containing protein","protein_coding"
"GSVIVT01005195001","No alias","Vitis vinifera","11.9.3.1 lipid metabolism.lipid degradation.lysophospholipases.phospholipase D Encodes a protein with phospholipase D activity. Involved in phospolipase metabolism. Mutants are affected in hydrogen peroxide mediated cell death. ARABIDOPSIS THALIANA PHOSPHOLIPASE D DELTA (ATPLDDELTA)","protein_coding"
"GSVIVT01008740001","No alias","Vitis vinifera","27.2 RNA.transcription Encodes the unique largest subunit of nuclear DNA-dependent RNA polymerase II the ortholog of budding yeast RPB1 and a homolog of the E. coli RNA polymerase beta prime subunit. RNA polymerase II large subunit (NRPB1)","protein_coding"
"GSVIVT01010122001","No alias","Vitis vinifera","27.2 RNA.transcription Nucleus  encoded plastid RNA polymerase. Localized in mitochondria and chloroplast. DNA/RNA polymerases superfamily protein","protein_coding"
"GSVIVT01010417001","No alias","Vitis vinifera","No description available","protein_coding"
"GSVIVT01010429001","No alias","Vitis vinifera","No description available","protein_coding"
"GSVIVT01010613001","No alias","Vitis vinifera","27.2 RNA.transcription One of two highly similar proteins that can serve as a non-catalytic subunit of nuclear DNA-dependent RNA polymerases II, IV and V homologous to budding yeast RPB6 and the E. coli RNA polymerase omega subunit. Probably redundant with At2g04630. NRPB6A","protein_coding"
"GSVIVT01011075001","No alias","Vitis vinifera","27.2 RNA.transcription RNA polymerase Rpb7 N-terminal domain-containing protein","protein_coding"
"GSVIVT01012562001","No alias","Vitis vinifera","27.2 RNA.transcription Non-catalytic subunit common to nuclear DNA-dependent RNA polymerases II, IV and V homologous to budding yeast RPB12. NRPB12","protein_coding"
"GSVIVT01012569001","No alias","Vitis vinifera","27.2 RNA.transcription Non-catalytic subunit common to nuclear DNA-dependent RNA polymerases II, IV and V homologous to budding yeast RPB12. NRPB12","protein_coding"
"GSVIVT01012570001","No alias","Vitis vinifera","27.2 RNA.transcription Non-catalytic subunit common to nuclear DNA-dependent RNA polymerases II, IV and V homologous to budding yeast RPB12. NRPB12","protein_coding"
"GSVIVT01013491001","No alias","Vitis vinifera","27.2 RNA.transcription Encodes the unique largest subunit of nuclear DNA-dependent RNA polymerase V homologous to budding yeast RPB1 and the E. coli RNA polymerase beta prime subunit.  Required for normal RNA-directed DNA methylation at non-CG methylation sites and transgene silencing. nuclear RNA polymerase D1B (NRPD1B)","protein_coding"
"GSVIVT01013776001","No alias","Vitis vinifera","27.2 RNA.transcription Protein of unknown function that is homologous to the At1g11475 locus that encodes a non-catalytic subunit common to nuclear DNA-dependent RNA polymerases II, IV and V. Homologous to budding yeast RPB10. RNA polymerases N / 8 kDa subunit","protein_coding"
"GSVIVT01014052001","No alias","Vitis vinifera","27.3.50 RNA.regulation of transcription.General Transcription RNA polymerase III RPC4","protein_coding"
"GSVIVT01014713001","No alias","Vitis vinifera","27.2 RNA.transcription RNA polymerase I subunit 43 (RPAC43)","protein_coding"
"GSVIVT01015098001","No alias","Vitis vinifera","27.3.50 RNA.regulation of transcription.General Transcription RNA polymerase III RPC4","protein_coding"
"GSVIVT01015349001","No alias","Vitis vinifera","27.2 RNA.transcription Non-catalytic subunit common to DNA-dependent RNA polymerases I, II, III and IV homologous to budding yeast RPB5. NRPB5","protein_coding"
"GSVIVT01016817001","No alias","Vitis vinifera","27.3.50 RNA.regulation of transcription.General Transcription DNA bindingDNA-directed RNA polymerases","protein_coding"
"GSVIVT01016958001","No alias","Vitis vinifera","No description available","protein_coding"
"GSVIVT01017094001","No alias","Vitis vinifera","27.2 RNA.transcription RNA polymerase beta' subunit-2 RPOC2","protein_coding"
"GSVIVT01017918001","No alias","Vitis vinifera","27.2 RNA.transcription RNA polymerase III subunit RPC82 family protein","protein_coding"
"GSVIVT01018108001","No alias","Vitis vinifera","27.2 RNA.transcription Non-catalytic subunit specific to DNA-directed RNA polymerase V homologous to budding yeast RPB7 NRPE7","protein_coding"
"GSVIVT01018995001","No alias","Vitis vinifera","27.2 RNA.transcription SIN-like family protein Has 1807","protein_coding"
"GSVIVT01019173001","No alias","Vitis vinifera","27.2 RNA.transcription RNA polymerase beta' subunit-2 RPOC2","protein_coding"
"GSVIVT01019518001","No alias","Vitis vinifera","28.1 DNA.synthesis/chromatin structure POLA3","protein_coding"
"GSVIVT01019869001","No alias","Vitis vinifera","27.2 RNA.transcription Encodes one of two alternative largest subunits of a putative plant-specific RNA polymerase IV (aka RNA polymerase D).  Required for posttranscriptional gene silencing. nuclear RNA polymerase D1A (NRPD1A)","protein_coding"
"GSVIVT01020543001","No alias","Vitis vinifera","27.2 RNA.transcription Encodes the unique second-largest subunit of DNA-dependent RNA polymerase II the ortholog of budding yeast RPB2 and a homolog of the E. coli RNA polymerase beta subunit. NRPB2","protein_coding"
"GSVIVT01020800001","No alias","Vitis vinifera","27.2 RNA.transcription One of two highly similar proteins that can serve as a non-catalytic subunit of nuclear DNA-dependent RNA polymerases II, IV and V homologous to budding yeast RPB6 and the E. coli RNA polymerase omega subunit. Probably redundant with At2g04630. NRPB6A","protein_coding"
"GSVIVT01021945001","No alias","Vitis vinifera","27.2 RNA.transcription RNA polymerase Rpb7 N-terminal domain-containing protein","protein_coding"
"GSVIVT01021951001","No alias","Vitis vinifera","16.10 secondary metabolism.simple phenols Encodes a protein that is similar to laccase-like polyphenol oxidases.  Involved in lignin and flavonoids biosynthesis.  It has four conserved copper binding domains. Expressed in developing testa, where it colocalizes with the flavonoid end products proanthocyanidins and flavonols. Mutant plants exhibited a delay in developmentally determined browning of the testa, characterized by the pale brown color of seed coat. The tt10 mutant seeds accumulate more epicatechin monomers and more soluble proanthocyanidins than wild-type seeds. Flavonol composition was also affected in tt10 seeds, which exhibited a higher ratio of quercetin rhamnoside monomers versus dimers than wild-type seeds. TRANSPARENT TESTA 10 (TT10)","protein_coding"
"GSVIVT01023660001","No alias","Vitis vinifera","27.2 RNA.transcription SCABRA 3 (SCA3)","protein_coding"
"GSVIVT01024869001","No alias","Vitis vinifera","27.2 RNA.transcription Non-catalytic subunit specific to DNA-directed RNA polymerase II the ortholog of budding yeast RPB7 NRPB7","protein_coding"
"GSVIVT01025079001","No alias","Vitis vinifera","27.2 RNA.transcription Encodes a subunit of RNA polymerase III (aka RNA polymerase C). nuclear RNA polymerase C1 (NRPC1)","protein_coding"
"GSVIVT01028933001","No alias","Vitis vinifera","27.2 RNA.transcription RNA polymerase III subunit RPC82 family protein","protein_coding"
"GSVIVT01029087001","No alias","Vitis vinifera","28.1 DNA.synthesis/chromatin structure DNA primase, large subunit family","protein_coding"
"GSVIVT01032753001","No alias","Vitis vinifera","27.2 RNA.transcription RNA polymerase beta' subunit-2 RPOC2","protein_coding"
"GSVIVT01033327001","No alias","Vitis vinifera","27.2 RNA.transcription Encodes a subunit of RNA polymerase I (aka RNA polymerase A). nuclear RNA polymerase A1 (NRPA1)","protein_coding"
"GSVIVT01033595001","No alias","Vitis vinifera","27.2 RNA.transcription Non-catalytic subunit unique to Nuclear DNA-dependent RNA polymerase V homologous to budding yeast RPB5. NRPE5","protein_coding"
"GSVIVT01035198001","No alias","Vitis vinifera","No description available","protein_coding"
"GSVIVT01035228001","No alias","Vitis vinifera","27.2 RNA.transcription Non-catalytic subunit common to nuclear DNA-dependent RNA polymerases II, IV and V homologous to budding yeast RPB12. NRPB12","protein_coding"
"GSVIVT01035251001","No alias","Vitis vinifera","27.2 RNA.transcription Chloroplast DNA-dependent RNA polymerase B subunit. The transcription of this gene is regulated by a nuclear encoded RNA polymerase. This gene has been transferred to mitochondrial genome during crucifer evolution. RNA polymerase subunit beta (RPOB)","protein_coding"
"GSVIVT01035963001","No alias","Vitis vinifera","27.2 RNA.transcription This gene encodes the second largest, catalytic subunit of the nuclear DNA-dependent RNA polymerase IV (aka RNA polymerase D). The NRPD2 protein is found at nuclear foci that overlap or are adjacent to chromocentromeres but are not fully coincident with chromocentromeres. The loss of NRPD2 leads to the loss of cytosine methylation at pericentromeric 5S genes and AtSN1 retroelements but has no discernible effect on centromere repeat methylation. This suggests that Pol IV primarily affects facultative heterochromatin rather than constitutive heterochromatin. nuclear RNA polymerase D2A (NRPD2A)","protein_coding"
"GSVIVT01036518001","No alias","Vitis vinifera","27.2 RNA.transcription Nucleus  encoded plastid RNA polymerase. Localized in mitochondria and chloroplast. DNA/RNA polymerases superfamily protein","protein_coding"
"GSVIVT01036597001","No alias","Vitis vinifera","27.2 RNA.transcription Encodes a subunit of RNA polymerase III (aka RNA polymerase C). nuclear RNA polymerase C2 (NRPC2)","protein_coding"
"GSVIVT01036642001","No alias","Vitis vinifera","27.2 RNA.transcription Encodes a subunit of RNA polymerase 1 (aka RNA polymerase A). nuclear RNA polymerase A2 (NRPA2)","protein_coding"
"LOC_Os01g34614","Os01g0530366","Oryza sativa","27.2 RNA.transcription Non-catalytic subunit common to nuclear DNA-dependent RNA polymerases II, IV and V homologous to budding yeast RPB12. NRPB12","protein_coding"
"LOC_Os01g48720","Os01g0679000","Oryza sativa","27.2 RNA.transcription RNA polymerase III subunit RPC82 family protein","protein_coding"
"LOC_Os01g57946","No alias","Oryza sativa","27.2 RNA.transcription RNA polymerase alpha subunit RNA polymerase subunit alpha (RPOA)","protein_coding"
"LOC_Os01g59140","Os01g0805800","Oryza sativa","27.2 RNA.transcription Non-catalytic subunit common to DNA-dependent RNA polymerases I, II, III and IV homologous to budding yeast RPB5. NRPB5","protein_coding"
"LOC_Os01g66580","Os01g0889200","Oryza sativa","27.3.50 RNA.regulation of transcription.General Transcription RNA polymerase III RPC4","protein_coding"
"LOC_Os01g73430","Os01g0965000","Oryza sativa","27.2 RNA.transcription Encodes the unique largest subunit of nuclear DNA-dependent RNA polymerase V homologous to budding yeast RPB1 and the E. coli RNA polymerase beta prime subunit.  Required for normal RNA-directed DNA methylation at non-CG methylation sites and transgene silencing. nuclear RNA polymerase D1B (NRPD1B)","protein_coding"
"LOC_Os02g05880","Os02g0152700","Oryza sativa","27.2 RNA.transcription Encodes the unique largest subunit of nuclear DNA-dependent RNA polymerase V homologous to budding yeast RPB1 and the E. coli RNA polymerase beta prime subunit.  Required for normal RNA-directed DNA methylation at non-CG methylation sites and transgene silencing. nuclear RNA polymerase D1B (NRPD1B)","protein_coding"
"LOC_Os02g24614","No alias","Oryza sativa","27.2 RNA.transcription RNA polymerase beta' subunit-1 RPOC1","protein_coding"
"LOC_Os02g49180","Os02g0723600","Oryza sativa","27.2 RNA.transcription RNA polymerase I subunit 43 (RPAC43)","protein_coding"
"LOC_Os03g18410","Os03g0295400","Oryza sativa","27.2 RNA.transcription RNA polymerase I subunit 43 (RPAC43)","protein_coding"
"LOC_Os03g28960","Os03g0403100","Oryza sativa","27.2 RNA.transcription Encodes a subunit of RNA polymerase III (aka RNA polymerase C). nuclear RNA polymerase C2 (NRPC2)","protein_coding"
"LOC_Os03g38960","Os03g0586600","Oryza sativa","27.2 RNA.transcription One of two highly similar proteins that can serve as a non-catalytic subunit of nuclear DNA-dependent RNA polymerases II, IV and V homologous to budding yeast RPB6 and the E. coli RNA polymerase omega subunit. Probably redundant with At2g04630. NRPB6A","protein_coding"
"LOC_Os03g44484","Os03g0646800","Oryza sativa","27.2 RNA.transcription Encodes the unique second-largest subunit of DNA-dependent RNA polymerase II the ortholog of budding yeast RPB2 and a homolog of the E. coli RNA polymerase beta subunit. NRPB2","protein_coding"
"LOC_Os04g16820","No alias","Oryza sativa","27.2 RNA.transcription Chloroplast DNA-dependent RNA polymerase B subunit. The transcription of this gene is regulated by a nuclear encoded RNA polymerase. This gene has been transferred to mitochondrial genome during crucifer evolution. RNA polymerase subunit beta (RPOB)","protein_coding"
"LOC_Os04g16830","No alias","Oryza sativa","27.2 RNA.transcription RNA polymerase beta' subunit-2 RPOC2","protein_coding"
"LOC_Os04g16842","No alias","Oryza sativa","27.2 RNA.transcription RNA polymerase alpha subunit RNA polymerase subunit alpha (RPOA)","protein_coding"
"LOC_Os04g32350","Os04g0394500","Oryza sativa","27.3.50 RNA.regulation of transcription.General Transcription RNA polymerase III RPC4","protein_coding"
"LOC_Os04g41040","Os04g0487300","Oryza sativa","27.2 RNA.transcription Non-catalytic subunit common to DNA-dependent RNA polymerases I, II, III and IV homologous to budding yeast RPB5. NRPB5","protein_coding"
"LOC_Os04g41490","Os04g0492300","Oryza sativa","27.2 RNA.transcription Encodes a subunit of RNA polymerase III (aka RNA polymerase C). nuclear RNA polymerase C1 (NRPC1)","protein_coding"
"LOC_Os04g54840","Os04g0641000","Oryza sativa","27.2 RNA.transcription This gene encodes the second largest, catalytic subunit of the nuclear DNA-dependent RNA polymerase IV (aka RNA polymerase D). The NRPD2 protein is found at nuclear foci that overlap or are adjacent to chromocentromeres but are not fully coincident with chromocentromeres. The loss of NRPD2 leads to the loss of cytosine methylation at pericentromeric 5S genes and AtSN1 retroelements but has no discernible effect on centromere repeat methylation. This suggests that Pol IV primarily affects facultative heterochromatin rather than constitutive heterochromatin. nuclear RNA polymerase D2A (NRPD2A)","protein_coding"
"LOC_Os05g05980","Os05g0151700","Oryza sativa","No description available","protein_coding"
"LOC_Os05g06490","Os05g0157100","Oryza sativa","27.2 RNA.transcription Non-catalytic subunit specific to DNA-directed RNA polymerase V homologous to budding yeast RPB7 NRPE7","protein_coding"
"LOC_Os05g13770","Os05g0224700","Oryza sativa","30.2.99 signalling.receptor kinases.misc Induced in response to Salicylic acid. receptor lectin kinase (RLK)","protein_coding"
"LOC_Os05g22830","Os05g0293600","Oryza sativa","27.2 RNA.transcription Chloroplast DNA-dependent RNA polymerase B subunit. The transcription of this gene is regulated by a nuclear encoded RNA polymerase. This gene has been transferred to mitochondrial genome during crucifer evolution. RNA polymerase subunit beta (RPOB)","protein_coding"
"LOC_Os05g22860","No alias","Oryza sativa","27.2 RNA.transcription Chloroplast DNA-dependent RNA polymerase B subunit. The transcription of this gene is regulated by a nuclear encoded RNA polymerase. This gene has been transferred to mitochondrial genome during crucifer evolution. RNA polymerase subunit beta (RPOB)","protein_coding"
"LOC_Os05g29010","Os05g0358200","Oryza sativa","28.1 DNA.synthesis/chromatin structure POLA3","protein_coding"
"LOC_Os05g33240","Os05g0400700","Oryza sativa","27.2 RNA.transcription Non-catalytic subunit specific to DNA-directed RNA polymerase II the ortholog of budding yeast RPB7 NRPB7","protein_coding"
"LOC_Os06g39700","No alias","Oryza sativa","27.2 RNA.transcription RNA polymerase alpha subunit RNA polymerase subunit alpha (RPOA)","protein_coding"
"LOC_Os06g40950","Os06g0612200","Oryza sativa","27.2 RNA.transcription Encodes a subunit of RNA polymerase I (aka RNA polymerase A). nuclear RNA polymerase A1 (NRPA1)","protein_coding"
"LOC_Os06g44230","Os06g0652000","Oryza sativa","27.2 RNA.transcription SCABRA 3 (SCA3)","protein_coding"
"LOC_Os07g01450","Os07g0105100","Oryza sativa","No description available","protein_coding"
"LOC_Os07g22400","Os07g0406800","Oryza sativa","28.1 DNA.synthesis/chromatin structure DNA primase, large subunit family","protein_coding"
"LOC_Os07g27930","Os07g0463100","Oryza sativa","27.2 RNA.transcription One of two highly similar proteins that can serve as a non-catalytic subunit of nuclear DNA-dependent RNA polymerases II, IV and V homologous to budding yeast RPB6 and the E. coli RNA polymerase omega subunit. Probably redundant with At2g04630. NRPB6A","protein_coding"
"LOC_Os07g29420","Os07g0477000","Oryza sativa","27.2 RNA.transcription RNA polymerase Rpb7 N-terminal domain-containing protein","protein_coding"
"LOC_Os07g42080","Os07g0611600","Oryza sativa","35.2 not assigned.unknown unknown protein","protein_coding"
"LOC_Os08g07480","Os08g0171600","Oryza sativa","27.2 RNA.transcription This gene encodes the second largest, catalytic subunit of the nuclear DNA-dependent RNA polymerase IV (aka RNA polymerase D). The NRPD2 protein is found at nuclear foci that overlap or are adjacent to chromocentromeres but are not fully coincident with chromocentromeres. The loss of NRPD2 leads to the loss of cytosine methylation at pericentromeric 5S genes and AtSN1 retroelements but has no discernible effect on centromere repeat methylation. This suggests that Pol IV primarily affects facultative heterochromatin rather than constitutive heterochromatin. nuclear RNA polymerase D2A (NRPD2A)","protein_coding"
"LOC_Os08g15288","No alias","Oryza sativa","27.2 RNA.transcription RNA polymerase alpha subunit RNA polymerase subunit alpha (RPOA)","protein_coding"
"LOC_Os08g16780","Os08g0268550","Oryza sativa","27.2 RNA.transcription SIN-like family protein Has 1807","protein_coding"
"LOC_Os08g32990","Os08g0426000","Oryza sativa","No description available","protein_coding"
"LOC_Os09g02284","Os09g0110400","Oryza sativa","27.2 RNA.transcription Non-catalytic subunit of nuclear DNA-dependent RNA polymerases II, IV and V homologous to budding yeast RPB3 and the E. coli RNA polymerase alpha subunit. A closely related paralog, encoded by At2g15400, can substitute for At2g15430 in the context of Pol V. NRPB3","protein_coding"
"LOC_Os09g07120","Os09g0246200","Oryza sativa","27.2 RNA.transcription Nucleus  encoded plastid RNA polymerase. Localized in mitochondria and chloroplast. DNA/RNA polymerases superfamily protein","protein_coding"
"LOC_Os10g21328","No alias","Oryza sativa","27.2 RNA.transcription RNA polymerase alpha subunit RNA polymerase subunit alpha (RPOA)","protein_coding"
"LOC_Os10g35290","Os10g0495600","Oryza sativa","27.2 RNA.transcription Encodes a subunit of RNA polymerase 1 (aka RNA polymerase A). nuclear RNA polymerase A2 (NRPA2)","protein_coding"
"LOC_Os11g04730","Os11g0143400","Oryza sativa","27.2 RNA.transcription Non-catalytic subunit unique to Nuclear DNA-dependent RNA polymerase V homologous to budding yeast RPB5. NRPE5","protein_coding"
"LOC_Os11g08940","Os11g0194800","Oryza sativa","27.2 RNA.transcription Protein of unknown function that is homologous to the At1g11475 locus that encodes a non-catalytic subunit common to nuclear DNA-dependent RNA polymerases II, IV and V. Homologous to budding yeast RPB10. RNA polymerases N / 8 kDa subunit","protein_coding"
"LOC_Os11g40090","Os11g0615100","Oryza sativa","27.3.50 RNA.regulation of transcription.General Transcription DNA bindingDNA-directed RNA polymerases","protein_coding"
"LOC_Os12g04510","Os12g0139500","Oryza sativa","27.2 RNA.transcription Non-catalytic subunit unique to Nuclear DNA-dependent RNA polymerase V homologous to budding yeast RPB5. NRPE5","protein_coding"
"LOC_Os12g07980","Os12g0180400","Oryza sativa","27.2 RNA.transcription Protein of unknown function that is homologous to the At1g11475 locus that encodes a non-catalytic subunit common to nuclear DNA-dependent RNA polymerases II, IV and V. Homologous to budding yeast RPB10. RNA polymerases N / 8 kDa subunit","protein_coding"
"MA_10208460g0010","No alias","Picea abies","27.2 RNA.transcription This gene encodes the second largest, catalytic subunit of the nuclear DNA-dependent RNA polymerase IV (aka RNA polymerase D). The NRPD2 protein is found at nuclear foci that overlap or are adjacent to chromocentromeres but are not fully coincident with chromocentromeres. The loss of NRPD2 leads to the loss of cytosine methylation at pericentromeric 5S genes and AtSN1 retroelements but has no discernible effect on centromere repeat methylation. This suggests that Pol IV primarily affects facultative heterochromatin rather than constitutive heterochromatin. nuclear RNA polymerase D2A (NRPD2A)","protein_coding"
"MA_10233545g0010","No alias","Picea abies","27.2 RNA.transcription Encodes the unique second-largest subunit of DNA-dependent RNA polymerase II the ortholog of budding yeast RPB2 and a homolog of the E. coli RNA polymerase beta subunit. NRPB2","protein_coding"
"MA_10265423g0010","No alias","Picea abies","27.2 RNA.transcription This gene encodes the second largest, catalytic subunit of the nuclear DNA-dependent RNA polymerase IV (aka RNA polymerase D). The NRPD2 protein is found at nuclear foci that overlap or are adjacent to chromocentromeres but are not fully coincident with chromocentromeres. The loss of NRPD2 leads to the loss of cytosine methylation at pericentromeric 5S genes and AtSN1 retroelements but has no discernible effect on centromere repeat methylation. This suggests that Pol IV primarily affects facultative heterochromatin rather than constitutive heterochromatin. nuclear RNA polymerase D2A (NRPD2A)","protein_coding"
"MA_10306826g0020","No alias","Picea abies","No description available","protein_coding"
"MA_103708g0010","No alias","Picea abies","27.2 RNA.transcription One of two highly similar proteins that can serve as a non-catalytic subunit of nuclear DNA-dependent RNA polymerases II, IV and V homologous to budding yeast RPB6 and the E. coli RNA polymerase omega subunit. Probably redundant with At2g04630. NRPB6A","protein_coding"
"MA_10426122g0010","No alias","Picea abies","27.2 RNA.transcription Encodes a subunit of RNA polymerase III (aka RNA polymerase C). nuclear RNA polymerase C1 (NRPC1)","protein_coding"
"MA_10427247g0010","No alias","Picea abies","27.2 RNA.transcription Encodes a subunit of RNA polymerase 1 (aka RNA polymerase A). nuclear RNA polymerase A2 (NRPA2)","protein_coding"
"MA_10429035g0010","No alias","Picea abies","27.2 RNA.transcription Encodes the unique second-largest subunit of DNA-dependent RNA polymerase II the ortholog of budding yeast RPB2 and a homolog of the E. coli RNA polymerase beta subunit. NRPB2","protein_coding"
"MA_10429035g0020","No alias","Picea abies","27.2 RNA.transcription Encodes the unique second-largest subunit of DNA-dependent RNA polymerase II the ortholog of budding yeast RPB2 and a homolog of the E. coli RNA polymerase beta subunit. NRPB2","protein_coding"
"MA_10429035g0030","No alias","Picea abies","27.2 RNA.transcription Encodes the unique second-largest subunit of DNA-dependent RNA polymerase II the ortholog of budding yeast RPB2 and a homolog of the E. coli RNA polymerase beta subunit. NRPB2","protein_coding"
"MA_10429268g0010","No alias","Picea abies","27.2 RNA.transcription Encodes one of two alternative largest subunits of a putative plant-specific RNA polymerase IV (aka RNA polymerase D).  Required for posttranscriptional gene silencing. nuclear RNA polymerase D1A (NRPD1A)","protein_coding"
"MA_10432131g0010","No alias","Picea abies","27.2 RNA.transcription Encodes the unique second-largest subunit of DNA-dependent RNA polymerase II the ortholog of budding yeast RPB2 and a homolog of the E. coli RNA polymerase beta subunit. NRPB2","protein_coding"
"MA_10433371g0010","No alias","Picea abies","27.3.50 RNA.regulation of transcription.General Transcription DNA bindingDNA-directed RNA polymerases","protein_coding"
"MA_10433899g0010","No alias","Picea abies","27.2 RNA.transcription Non-catalytic subunit specific to DNA-directed RNA polymerase V homologous to budding yeast RPB7 NRPE7","protein_coding"
"MA_10434720g0010","No alias","Picea abies","27.2 RNA.transcription Encodes a subunit of RNA polymerase 1 (aka RNA polymerase A). nuclear RNA polymerase A2 (NRPA2)","protein_coding"
"MA_10435418g0010","No alias","Picea abies","27.2 RNA.transcription Non-catalytic subunit common to DNA-dependent RNA polymerases I, II, III and IV homologous to budding yeast RPB5. NRPB5","protein_coding"
"MA_10436091g0010","No alias","Picea abies","27.2 RNA.transcription Encodes a subunit of RNA polymerase III (aka RNA polymerase C). nuclear RNA polymerase C1 (NRPC1)","protein_coding"
"MA_10436179g0010","No alias","Picea abies","27.2 RNA.transcription This gene encodes the second largest, catalytic subunit of the nuclear DNA-dependent RNA polymerase IV (aka RNA polymerase D). The NRPD2 protein is found at nuclear foci that overlap or are adjacent to chromocentromeres but are not fully coincident with chromocentromeres. The loss of NRPD2 leads to the loss of cytosine methylation at pericentromeric 5S genes and AtSN1 retroelements but has no discernible effect on centromere repeat methylation. This suggests that Pol IV primarily affects facultative heterochromatin rather than constitutive heterochromatin. nuclear RNA polymerase D2A (NRPD2A)","protein_coding"
"MA_10437084g0050","No alias","Picea abies","27.2 RNA.transcription RNA polymerase beta' subunit-2 RPOC2","protein_coding"
"MA_10437084g0060","No alias","Picea abies","27.2 RNA.transcription RNA polymerase beta' subunit-1 RPOC1","protein_coding"
"MA_10437084g0070","No alias","Picea abies","27.2 RNA.transcription Chloroplast DNA-dependent RNA polymerase B subunit. The transcription of this gene is regulated by a nuclear encoded RNA polymerase. This gene has been transferred to mitochondrial genome during crucifer evolution. RNA polymerase subunit beta (RPOB)","protein_coding"
"MA_114482g0010","No alias","Picea abies","27.2 RNA.transcription Non-catalytic subunit unique to Nuclear DNA-dependent RNA polymerase V homologous to budding yeast RPB5. NRPE5","protein_coding"
"MA_117392g0010","No alias","Picea abies","27.2 RNA.transcription Encodes a subunit of RNA polymerase III (aka RNA polymerase C). nuclear RNA polymerase C2 (NRPC2)","protein_coding"
"MA_117392g0020","No alias","Picea abies","27.2 RNA.transcription Encodes a subunit of RNA polymerase III (aka RNA polymerase C). nuclear RNA polymerase C2 (NRPC2)","protein_coding"
"MA_11783g0020","No alias","Picea abies","27.2 RNA.transcription Non-catalytic subunit specific to DNA-directed RNA polymerase II the ortholog of budding yeast RPB7 NRPB7","protein_coding"
"MA_122415g0010","No alias","Picea abies","27.2 RNA.transcription Nucleus  encoded plastid RNA polymerase. Localized in mitochondria and chloroplast. DNA/RNA polymerases superfamily protein","protein_coding"
"MA_131181g0010","No alias","Picea abies","27.2 RNA.transcription One of two highly similar proteins that can serve as a non-catalytic subunit of nuclear DNA-dependent RNA polymerases II, IV and V homologous to budding yeast RPB6 and the E. coli RNA polymerase omega subunit. Probably redundant with At2g04630. NRPB6A","protein_coding"
"MA_143414g0010","No alias","Picea abies","No description available","protein_coding"
"MA_143862g0150","No alias","Picea abies","No description available","protein_coding"
"MA_158898g0100","No alias","Picea abies","No description available","protein_coding"
"MA_159042g0500","No alias","Picea abies","27.2 RNA.transcription Chloroplast DNA-dependent RNA polymerase B subunit. The transcription of this gene is regulated by a nuclear encoded RNA polymerase. This gene has been transferred to mitochondrial genome during crucifer evolution. RNA polymerase subunit beta (RPOB)","protein_coding"
"MA_159042g0510","No alias","Picea abies","27.2 RNA.transcription RNA polymerase beta' subunit-1 RPOC1","protein_coding"
"MA_159042g0750","No alias","Picea abies","27.2 RNA.transcription RNA polymerase alpha subunit RNA polymerase subunit alpha (RPOA)","protein_coding"
"MA_179020g0010","No alias","Picea abies","27.2 RNA.transcription SIN-like family protein Has 1807","protein_coding"
"MA_1924241g0010","No alias","Picea abies","27.2 RNA.transcription Non-catalytic subunit of nuclear DNA-dependent RNA polymerases II, IV and V homologous to budding yeast RPB3 and the E. coli RNA polymerase alpha subunit. A closely related paralog, encoded by At2g15400, can substitute for At2g15430 in the context of Pol V. NRPB3","protein_coding"
"MA_206415g0010","No alias","Picea abies","27.2 RNA.transcription Encodes a subunit of RNA polymerase III (aka RNA polymerase C). nuclear RNA polymerase C2 (NRPC2)","protein_coding"
"MA_25764g0010","No alias","Picea abies","27.2 RNA.transcription Non-catalytic subunit of nuclear DNA-dependent RNA polymerases II, IV and V homologous to budding yeast RPB3 and the E. coli RNA polymerase alpha subunit. A closely related paralog, encoded by At2g15400, can substitute for At2g15430 in the context of Pol V. NRPB3","protein_coding"
"MA_300g0010","No alias","Picea abies","27.2 RNA.transcription Encodes the unique largest subunit of nuclear DNA-dependent RNA polymerase II the ortholog of budding yeast RPB1 and a homolog of the E. coli RNA polymerase beta prime subunit. RNA polymerase II large subunit (NRPB1)","protein_coding"
"MA_32647g0010","No alias","Picea abies","27.2 RNA.transcription Encodes a subunit of RNA polymerase IV (aka RNA polymerase D). NRPD2b is closely related to NRPD2a, but has lower levels of transcription and does not affect endogenous siRNA when mutated. nuclear RNA polymerase D2B (NRPD2B)","protein_coding"
"MA_336522g0010","No alias","Picea abies","27.2 RNA.transcription Encodes the unique largest subunit of nuclear DNA-dependent RNA polymerase V homologous to budding yeast RPB1 and the E. coli RNA polymerase beta prime subunit.  Required for normal RNA-directed DNA methylation at non-CG methylation sites and transgene silencing. nuclear RNA polymerase D1B (NRPD1B)","protein_coding"
"MA_342841g0010","No alias","Picea abies","27.2 RNA.transcription Encodes a subunit of RNA polymerase III (aka RNA polymerase C). nuclear RNA polymerase C2 (NRPC2)","protein_coding"
"MA_36490g0010","No alias","Picea abies","27.2 RNA.transcription Encodes a subunit of RNA polymerase III (aka RNA polymerase C). nuclear RNA polymerase C2 (NRPC2)","protein_coding"
"MA_37522g0020","No alias","Picea abies","No description available","protein_coding"
"MA_41052g0010","No alias","Picea abies","27.2 RNA.transcription Non-catalytic subunit common to nuclear DNA-dependent RNA polymerases II, IV and V homologous to budding yeast RPB12. NRPB12","protein_coding"
"MA_426249g0010","No alias","Picea abies","27.2 RNA.transcription Non-catalytic subunit common to nuclear DNA-dependent RNA polymerases II, IV and V homologous to budding yeast RPB12. NRPB12","protein_coding"
"MA_444205g0010","No alias","Picea abies","27.3.50 RNA.regulation of transcription.General Transcription RNA polymerase III RPC4","protein_coding"
"MA_45109g0010","No alias","Picea abies","No description available","protein_coding"
"MA_46890g0010","No alias","Picea abies","27.2 RNA.transcription Encodes a subunit of RNA polymerase III (aka RNA polymerase C). nuclear RNA polymerase C2 (NRPC2)","protein_coding"
"MA_533482g0010","No alias","Picea abies","27.2 RNA.transcription Encodes a subunit of RNA polymerase I (aka RNA polymerase A). nuclear RNA polymerase A1 (NRPA1)","protein_coding"
"MA_558129g0010","No alias","Picea abies","27.2 RNA.transcription Non-catalytic subunit common to nuclear DNA-dependent RNA polymerases II, IV and V homologous to budding yeast RPB12. NRPB12","protein_coding"
"MA_5690g0010","No alias","Picea abies","27.2 RNA.transcription Encodes the unique largest subunit of nuclear DNA-dependent RNA polymerase II the ortholog of budding yeast RPB1 and a homolog of the E. coli RNA polymerase beta prime subunit. RNA polymerase II large subunit (NRPB1)","protein_coding"
"MA_57298g0010","No alias","Picea abies","27.2 RNA.transcription Non-catalytic subunit common to DNA-dependent RNA polymerases I, II, III and IV homologous to budding yeast RPB5. NRPB5","protein_coding"
"MA_6562g0010","No alias","Picea abies","27.2 RNA.transcription Non-catalytic subunit of nuclear DNA-dependent RNA polymerases II, IV and V homologous to budding yeast RPB3 and the E. coli RNA polymerase alpha subunit. A closely related paralog, encoded by At2g15400, can substitute for At2g15430 in the context of Pol V. NRPB3","protein_coding"
"MA_664435g0010","No alias","Picea abies","No description available","protein_coding"
"MA_681731g0010","No alias","Picea abies","27.2 RNA.transcription Encodes a subunit of RNA polymerase I (aka RNA polymerase A). nuclear RNA polymerase A1 (NRPA1)","protein_coding"
"MA_7415684g0010","No alias","Picea abies","27.2 RNA.transcription Encodes a subunit of RNA polymerase III (aka RNA polymerase C). nuclear RNA polymerase C1 (NRPC1)","protein_coding"
"MA_776409g0010","No alias","Picea abies","27.2 RNA.transcription Encodes a subunit of RNA polymerase III (aka RNA polymerase C). nuclear RNA polymerase C2 (NRPC2)","protein_coding"
"MA_81144g0010","No alias","Picea abies","27.2 RNA.transcription Encodes the unique second-largest subunit of DNA-dependent RNA polymerase II the ortholog of budding yeast RPB2 and a homolog of the E. coli RNA polymerase beta subunit. NRPB2","protein_coding"
"MA_842965g0020","No alias","Picea abies","27.2 RNA.transcription RNA polymerase I subunit 43 (RPAC43)","protein_coding"
"MA_8544g0010","No alias","Picea abies","27.2 RNA.transcription Encodes the unique largest subunit of nuclear DNA-dependent RNA polymerase II the ortholog of budding yeast RPB1 and a homolog of the E. coli RNA polymerase beta prime subunit. RNA polymerase II large subunit (NRPB1)","protein_coding"
"MA_8720349g0010","No alias","Picea abies","27.2 RNA.transcription Encodes the unique largest subunit of nuclear DNA-dependent RNA polymerase V homologous to budding yeast RPB1 and the E. coli RNA polymerase beta prime subunit.  Required for normal RNA-directed DNA methylation at non-CG methylation sites and transgene silencing. nuclear RNA polymerase D1B (NRPD1B)","protein_coding"
"MA_8784411g0010","No alias","Picea abies","27.2 RNA.transcription Encodes a subunit of RNA polymerase III (aka RNA polymerase C). nuclear RNA polymerase C2 (NRPC2)","protein_coding"
"MA_885565g0010","No alias","Picea abies","No description available","protein_coding"
"MA_89401g0010","No alias","Picea abies","27.2 RNA.transcription Non-catalytic subunit specific to DNA-directed RNA polymerase II the ortholog of budding yeast RPB7 NRPB7","protein_coding"
"MA_914768g0010","No alias","Picea abies","27.2 RNA.transcription Encodes the unique second-largest subunit of DNA-dependent RNA polymerase II the ortholog of budding yeast RPB2 and a homolog of the E. coli RNA polymerase beta subunit. NRPB2","protein_coding"
"MA_943901g0010","No alias","Picea abies","27.2 RNA.transcription SCABRA 3 (SCA3)","protein_coding"
"MA_94731g0010","No alias","Picea abies","27.2 RNA.transcription RNA polymerase I subunit 43 (RPAC43)","protein_coding"
"MA_949748g0010","No alias","Picea abies","27.2 RNA.transcription Encodes a subunit of RNA polymerase IV (aka RNA polymerase D). NRPD2b is closely related to NRPD2a, but has lower levels of transcription and does not affect endogenous siRNA when mutated. nuclear RNA polymerase D2B (NRPD2B)","protein_coding"
"MA_9573823g0010","No alias","Picea abies","27.2 RNA.transcription This gene encodes the second largest, catalytic subunit of the nuclear DNA-dependent RNA polymerase IV (aka RNA polymerase D). The NRPD2 protein is found at nuclear foci that overlap or are adjacent to chromocentromeres but are not fully coincident with chromocentromeres. The loss of NRPD2 leads to the loss of cytosine methylation at pericentromeric 5S genes and AtSN1 retroelements but has no discernible effect on centromere repeat methylation. This suggests that Pol IV primarily affects facultative heterochromatin rather than constitutive heterochromatin. nuclear RNA polymerase D2A (NRPD2A)","protein_coding"
"MA_962071g0010","No alias","Picea abies","27.2 RNA.transcription Encodes the unique largest subunit of nuclear DNA-dependent RNA polymerase II the ortholog of budding yeast RPB1 and a homolog of the E. coli RNA polymerase beta prime subunit. RNA polymerase II large subunit (NRPB1)","protein_coding"
"MA_96532g0010","No alias","Picea abies","27.2 RNA.transcription Non-catalytic subunit of nuclear DNA-dependent RNA polymerases II, IV and V homologous to budding yeast RPB3 and the E. coli RNA polymerase alpha subunit. A closely related paralog, encoded by At2g15400, can substitute for At2g15430 in the context of Pol V. NRPB3","protein_coding"
"MA_96532g0020","No alias","Picea abies","27.2 RNA.transcription Non-catalytic subunit of nuclear DNA-dependent RNA polymerases II, IV and V homologous to budding yeast RPB3 and the E. coli RNA polymerase alpha subunit. A closely related paralog, encoded by At2g15400, can substitute for At2g15430 in the context of Pol V. NRPB3","protein_coding"
"MA_9663g0010","No alias","Picea abies","27.2 RNA.transcription Encodes the unique largest subunit of nuclear DNA-dependent RNA polymerase II the ortholog of budding yeast RPB1 and a homolog of the E. coli RNA polymerase beta prime subunit. RNA polymerase II large subunit (NRPB1)","protein_coding"
"MA_99205g0020","No alias","Picea abies","28.1 DNA.synthesis/chromatin structure DNA primase, large subunit family","protein_coding"
"Smo101823","PACid_15406172","Selaginella moellendorfii ","No description available","protein_coding"
"Smo110201","PACid_15405805","Selaginella moellendorfii ","No description available","protein_coding"
"Smo111873","PACid_15413582","Selaginella moellendorfii ","No description available","protein_coding"
"Smo118653","PACid_15410128","Selaginella moellendorfii ","27.2 RNA.transcription This gene encodes the second largest, catalytic subunit of the nuclear DNA-dependent RNA polymerase IV (aka RNA polymerase D). The NRPD2 protein is found at nuclear foci that overlap or are adjacent to chromocentromeres but are not fully coincident with chromocentromeres. The loss of NRPD2 leads to the loss of cytosine methylation at pericentromeric 5S genes and AtSN1 retroelements but has no discernible effect on centromere repeat methylation. This suggests that Pol IV primarily affects facultative heterochromatin rather than constitutive heterochromatin. nuclear RNA polymerase D2A (NRPD2A) CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase, subunit 2, domain 6 (InterPro:IPR007120), RNA polymerase Rpb2, domain 7 (InterPro:IPR007641), RNA polymerase, beta subunit, protrusion (InterPro:IPR007644), RNA polymerase Rpb2, domain 3 (InterPro:IPR007645), DNA-directed RNA polymerase, subunit 2 (InterPro:IPR015712), RNA polymerase Rpb2, domain 2 (InterPro:IPR007642), RNA polymerase Rpb2, domain 4 (InterPro:IPR007646), RNA polymerase, beta subunit, conserved site (InterPro:IPR007121), RNA polymerase Rpb2, domain 5 (InterPro:IPR007647) BEST Arabidopsis thaliana protein match is: nuclear RNA polymerase D2B (TAIR:AT3G18090.1). & (chl4|518440 : 357.0","protein_coding"
"Smo128885","PACid_15418948","Selaginella moellendorfii ","No description available","protein_coding"
"Smo137771","PACid_15422279","Selaginella moellendorfii ","27.2 RNA.transcription RNA polymerase beta' subunit-1 RPOC1 FUNCTIONS IN: DNA-directed RNA polymerase activity INVOLVED IN: RNA elongation LOCATED IN: chloroplast, nucleoid EXPRESSED IN: 22 plant structures EXPRESSED DURING: 13 growth stages CONTAINS InterPro DOMAIN/s: RNA polymerase, N-terminal (InterPro:IPR006592), RNA polymerase, alpha subunit (InterPro:IPR000722), RNA polymerase Rpb1, domain 3 (InterPro:IPR007066), RNA polymerase Rpb1, domain 1 (InterPro:IPR007080) BEST Arabidopsis thaliana protein match is: nuclear RNA polymerase C1 (TAIR:AT5G60040.1). & (loc_osp1g00250.1 : 484.0","protein_coding"
"Smo137778","PACid_15422282","Selaginella moellendorfii ","27.2 RNA.transcription RNA polymerase alpha subunit RNA polymerase subunit alpha (RPOA) FUNCTIONS IN: DNA-directed RNA polymerase activity INVOLVED IN: RNA elongation LOCATED IN: chloroplast, nucleoid EXPRESSED IN: 23 plant structures EXPRESSED DURING: 13 growth stages CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase, insert domain (InterPro:IPR011262), DNA-directed RNA polymerase, alpha subunit (InterPro:IPR011773), RNA polymerase, alpha subunit, C-terminal (InterPro:IPR011260), DNA-directed RNA polymerase, dimerisation (InterPro:IPR011261), DNA-directed RNA polymerase, RpoA/D/Rpb3-type (InterPro:IPR011263), DNA-directed RNA polymerase, RBP11-like (InterPro:IPR009025). & (loc_os10g21330.1 : 214.0","protein_coding"
"Smo137828","PACid_15422915","Selaginella moellendorfii ","27.2 RNA.transcription RNA polymerase beta' subunit-2 RPOC2 FUNCTIONS IN: DNA-directed RNA polymerase activity INVOLVED IN: RNA elongation LOCATED IN: chloroplast, nucleoid EXPRESSED IN: 24 plant structures EXPRESSED DURING: 13 growth stages CONTAINS InterPro DOMAIN/s: RNA polymerase Rpb1, domain 3 (InterPro:IPR007066), RNA polymerase Rpb1, domain 5 (InterPro:IPR007081), DNA-directed RNA polymerase, subunit beta&apos&apos (InterPro:IPR012756), RNA polymerase Rpb1, domain 4 (InterPro:IPR007083) BEST Arabidopsis thaliana protein match is: nuclear RNA polymerase A1 (TAIR:AT3G57660.1). & (loc_osp1g00260.1 : 533.0","protein_coding"
"Smo139194","PACid_15401304","Selaginella moellendorfii ","27.2 RNA.transcription Chloroplast DNA-dependent RNA polymerase B subunit. The transcription of this gene is regulated by a nuclear encoded RNA polymerase. This gene has been transferred to mitochondrial genome during crucifer evolution. RNA polymerase subunit beta (RPOB) FUNCTIONS IN: DNA-directed RNA polymerase activity, protein binding INVOLVED IN: RNA elongation LOCATED IN: chloroplast, nucleoid EXPRESSED IN: 22 plant structures EXPRESSED DURING: 13 growth stages CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase, subunit 2, domain 6 (InterPro:IPR007120), RNA polymerase Rpb2, domain 7 (InterPro:IPR007641), RNA polymerase, beta subunit, protrusion (InterPro:IPR007644), DNA-directed RNA polymerase, beta subunit, bacterial-type (InterPro:IPR010243), RNA polymerase Rpb2, domain 3 (InterPro:IPR007645), DNA-directed RNA polymerase, subunit 2 (InterPro:IPR015712), RNA polymerase Rpb2, domain 2 (InterPro:IPR007642), RNA polymerase, beta subunit, conserved site (InterPro:IPR007121) BEST Arabidopsis thaliana protein match is: DNA-directed RNA polymerase family protein (TAIR:AT4G21710.1). & (loc_os04g16820.1 : 266.0","protein_coding"
"Smo139200","PACid_15401925","Selaginella moellendorfii ","27.2 RNA.transcription Chloroplast DNA-dependent RNA polymerase B subunit. The transcription of this gene is regulated by a nuclear encoded RNA polymerase. This gene has been transferred to mitochondrial genome during crucifer evolution. RNA polymerase subunit beta (RPOB) FUNCTIONS IN: DNA-directed RNA polymerase activity, protein binding INVOLVED IN: RNA elongation LOCATED IN: chloroplast, nucleoid EXPRESSED IN: 22 plant structures EXPRESSED DURING: 13 growth stages CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase, subunit 2, domain 6 (InterPro:IPR007120), RNA polymerase Rpb2, domain 7 (InterPro:IPR007641), RNA polymerase, beta subunit, protrusion (InterPro:IPR007644), DNA-directed RNA polymerase, beta subunit, bacterial-type (InterPro:IPR010243), RNA polymerase Rpb2, domain 3 (InterPro:IPR007645), DNA-directed RNA polymerase, subunit 2 (InterPro:IPR015712), RNA polymerase Rpb2, domain 2 (InterPro:IPR007642), RNA polymerase, beta subunit, conserved site (InterPro:IPR007121) BEST Arabidopsis thaliana protein match is: DNA-directed RNA polymerase family protein (TAIR:AT4G21710.1). & (loc_os04g16820.1 : 130.0","protein_coding"
"Smo148107","PACid_15405344","Selaginella moellendorfii ","27.2 RNA.transcription Encodes the unique second-largest subunit of DNA-dependent RNA polymerase II the ortholog of budding yeast RPB2 and a homolog of the E. coli RNA polymerase beta subunit. NRPB2 CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase, subunit 2, domain 6 (InterPro:IPR007120), RNA polymerase Rpb2, domain 7 (InterPro:IPR007641), RNA polymerase, beta subunit, protrusion (InterPro:IPR007644), RNA polymerase Rpb2, domain 3 (InterPro:IPR007645), DNA-directed RNA polymerase, subunit 2 (InterPro:IPR015712), RNA polymerase Rpb2, domain 2 (InterPro:IPR007642), RNA polymerase Rpb2, domain 4 (InterPro:IPR007646), RNA polymerase, beta subunit, conserved site (InterPro:IPR007121), RNA polymerase Rpb2, domain 5 (InterPro:IPR007647) BEST Arabidopsis thaliana protein match is: nuclear RNA polymerase C2 (TAIR:AT5G45140.1) Has 37546 Blast hits to 27868 proteins in 9192 species: Archae - 496 Bacteria - 17572 Metazoa - 623 Fungi - 7193 Plants - 3397 Viruses - 232 Other Eukaryotes - 8033 (source: NCBI BLink). & (chl4|518440 : 1400.0","protein_coding"
"Smo173570","PACid_15415674","Selaginella moellendorfii ","No description available","protein_coding"
"Smo18694","PACid_15402300","Selaginella moellendorfii ","No description available","protein_coding"
"Smo228648","PACid_15409247","Selaginella moellendorfii ","No description available","protein_coding"
"Smo235152","PACid_15403748","Selaginella moellendorfii ","No description available","protein_coding"
"Smo236845","PACid_15412131","Selaginella moellendorfii ","27.2 RNA.transcription Chloroplast DNA-dependent RNA polymerase B subunit. The transcription of this gene is regulated by a nuclear encoded RNA polymerase. This gene has been transferred to mitochondrial genome during crucifer evolution. RNA polymerase subunit beta (RPOB) FUNCTIONS IN: DNA-directed RNA polymerase activity, protein binding INVOLVED IN: RNA elongation LOCATED IN: chloroplast, nucleoid EXPRESSED IN: 22 plant structures EXPRESSED DURING: 13 growth stages CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase, subunit 2, domain 6 (InterPro:IPR007120), RNA polymerase Rpb2, domain 7 (InterPro:IPR007641), RNA polymerase, beta subunit, protrusion (InterPro:IPR007644), DNA-directed RNA polymerase, beta subunit, bacterial-type (InterPro:IPR010243), RNA polymerase Rpb2, domain 3 (InterPro:IPR007645), DNA-directed RNA polymerase, subunit 2 (InterPro:IPR015712), RNA polymerase Rpb2, domain 2 (InterPro:IPR007642), RNA polymerase, beta subunit, conserved site (InterPro:IPR007121) BEST Arabidopsis thaliana protein match is: DNA-directed RNA polymerase family protein (TAIR:AT4G21710.1). & (loc_os04g16820.1 : 881.0","protein_coding"
"Smo237022","PACid_15408826","Selaginella moellendorfii ","27.2 RNA.transcription Chloroplast DNA-dependent RNA polymerase B subunit. The transcription of this gene is regulated by a nuclear encoded RNA polymerase. This gene has been transferred to mitochondrial genome during crucifer evolution. RNA polymerase subunit beta (RPOB) FUNCTIONS IN: DNA-directed RNA polymerase activity, protein binding INVOLVED IN: RNA elongation LOCATED IN: chloroplast, nucleoid EXPRESSED IN: 22 plant structures EXPRESSED DURING: 13 growth stages CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase, subunit 2, domain 6 (InterPro:IPR007120), RNA polymerase Rpb2, domain 7 (InterPro:IPR007641), RNA polymerase, beta subunit, protrusion (InterPro:IPR007644), DNA-directed RNA polymerase, beta subunit, bacterial-type (InterPro:IPR010243), RNA polymerase Rpb2, domain 3 (InterPro:IPR007645), DNA-directed RNA polymerase, subunit 2 (InterPro:IPR015712), RNA polymerase Rpb2, domain 2 (InterPro:IPR007642), RNA polymerase, beta subunit, conserved site (InterPro:IPR007121) BEST Arabidopsis thaliana protein match is: DNA-directed RNA polymerase family protein (TAIR:AT4G21710.1). & (loc_os04g16820.1 : 881.0","protein_coding"
"Smo237023","PACid_15408828","Selaginella moellendorfii ","27.2 RNA.transcription Chloroplast DNA-dependent RNA polymerase B subunit. The transcription of this gene is regulated by a nuclear encoded RNA polymerase. This gene has been transferred to mitochondrial genome during crucifer evolution. RNA polymerase subunit beta (RPOB) FUNCTIONS IN: DNA-directed RNA polymerase activity, protein binding INVOLVED IN: RNA elongation LOCATED IN: chloroplast, nucleoid EXPRESSED IN: 22 plant structures EXPRESSED DURING: 13 growth stages CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase, subunit 2, domain 6 (InterPro:IPR007120), RNA polymerase Rpb2, domain 7 (InterPro:IPR007641), RNA polymerase, beta subunit, protrusion (InterPro:IPR007644), DNA-directed RNA polymerase, beta subunit, bacterial-type (InterPro:IPR010243), RNA polymerase Rpb2, domain 3 (InterPro:IPR007645), DNA-directed RNA polymerase, subunit 2 (InterPro:IPR015712), RNA polymerase Rpb2, domain 2 (InterPro:IPR007642), RNA polymerase, beta subunit, conserved site (InterPro:IPR007121) BEST Arabidopsis thaliana protein match is: DNA-directed RNA polymerase family protein (TAIR:AT4G21710.1). & (loc_os04g16820.1 : 881.0","protein_coding"
"Smo237024","PACid_15408829","Selaginella moellendorfii ","27.2 RNA.transcription Chloroplast DNA-dependent RNA polymerase B subunit. The transcription of this gene is regulated by a nuclear encoded RNA polymerase. This gene has been transferred to mitochondrial genome during crucifer evolution. RNA polymerase subunit beta (RPOB) FUNCTIONS IN: DNA-directed RNA polymerase activity, protein binding INVOLVED IN: RNA elongation LOCATED IN: chloroplast, nucleoid EXPRESSED IN: 22 plant structures EXPRESSED DURING: 13 growth stages CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase, subunit 2, domain 6 (InterPro:IPR007120), RNA polymerase Rpb2, domain 7 (InterPro:IPR007641), RNA polymerase, beta subunit, protrusion (InterPro:IPR007644), DNA-directed RNA polymerase, beta subunit, bacterial-type (InterPro:IPR010243), RNA polymerase Rpb2, domain 3 (InterPro:IPR007645), DNA-directed RNA polymerase, subunit 2 (InterPro:IPR015712), RNA polymerase Rpb2, domain 2 (InterPro:IPR007642), RNA polymerase, beta subunit, conserved site (InterPro:IPR007121) BEST Arabidopsis thaliana protein match is: DNA-directed RNA polymerase family protein (TAIR:AT4G21710.1). & (loc_os04g16820.1 : 826.0","protein_coding"
"Smo405033","PACid_15410045","Selaginella moellendorfii ","No description available","protein_coding"
"Smo409226","PACid_15423126","Selaginella moellendorfii ","27.2 RNA.transcription RNA polymerase I subunit 43 (RPAC43) FUNCTIONS IN: DNA-directed RNA polymerase activity, protein dimerization activity, DNA binding INVOLVED IN: transcription EXPRESSED IN: 11 plant structures EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase, insert domain (InterPro:IPR011262), DNA-directed RNA polymerase, dimerisation (InterPro:IPR011261), DNA-directed RNA polymerase, RpoA/D/Rpb3-type (InterPro:IPR011263), DNA-directed RNA polymerase, 30-40kDa subunit, conserved site (InterPro:IPR001514), DNA-directed RNA polymerase, RBP11-like (InterPro:IPR009025) BEST Arabidopsis thaliana protein match is: DNA-directed RNA polymerase family protein (TAIR:AT1G60850.1) Has 1342 Blast hits to 1342 proteins in 354 species: Archae - 247 Bacteria - 1 Metazoa - 281 Fungi - 345 Plants - 107 Viruses - 0 Other Eukaryotes - 361 (source: NCBI BLink). & (chl4|524203 : 140.0","protein_coding"
"Smo414649","PACid_15418960","Selaginella moellendorfii ","No description available","protein_coding"
"Smo418944","PACid_15410635","Selaginella moellendorfii ","27.2 RNA.transcription SIN-like family protein Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0 Bacteria - 0 Metazoa - 736 Fungi - 347 Plants - 385 Viruses - 0 Other Eukaryotes - 339 (source: NCBI BLink). & (loc_os08g16780.1 : 206.0","protein_coding"
"Smo430080","PACid_15417120","Selaginella moellendorfii ","No description available","protein_coding"
"Smo438401","PACid_15420992","Selaginella moellendorfii ","No description available","protein_coding"
"Smo441655","PACid_15409435","Selaginella moellendorfii ","27.2 RNA.transcription Encodes one of two alternative largest subunits of a putative plant-specific RNA polymerase IV (aka RNA polymerase D).  Required for posttranscriptional gene silencing. nuclear RNA polymerase D1A (NRPD1A) FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding INVOLVED IN: in 7 processes LOCATED IN: nucleus, DNA-directed RNA polymerase IV complex EXPRESSED IN: 9 plant structures EXPRESSED DURING: 6 growth stages CONTAINS InterPro DOMAIN/s: RNA polymerase, N-terminal (InterPro:IPR006592), RNA polymerase, alpha subunit (InterPro:IPR000722), RNA polymerase Rpb1, domain 3 (InterPro:IPR007066), RNA polymerase Rpb1, domain 1 (InterPro:IPR007080), RNA polymerase Rpb1, domain 4 (InterPro:IPR007083), Protein of unknown function DUF3223 (InterPro:IPR021602), RNA polymerase Rpb1, domain 5 (InterPro:IPR007081) BEST Arabidopsis thaliana protein match is: nuclear RNA polymerase D1B (TAIR:AT2G40030.1). & (loc_os02g05880.1 : 268.0","protein_coding"
"Smo442173","PACid_15408520","Selaginella moellendorfii ","No description available","protein_coding"
"Smo442419","PACid_15410797","Selaginella moellendorfii ","27.2 RNA.transcription Encodes a subunit of RNA polymerase III (aka RNA polymerase C). nuclear RNA polymerase C1 (NRPC1) FUNCTIONS IN: DNA-directed RNA polymerase activity, ribonucleoside binding, DNA binding, zinc ion binding INVOLVED IN: transcription LOCATED IN: nucleus EXPRESSED IN: 21 plant structures EXPRESSED DURING: 13 growth stages CONTAINS InterPro DOMAIN/s: RNA polymerase, N-terminal (InterPro:IPR006592), RNA polymerase, alpha subunit (InterPro:IPR000722), RNA polymerase Rpb1, domain 3 (InterPro:IPR007066), RNA polymerase Rpb1, domain 5 (InterPro:IPR007081), RNA polymerase Rpb1, domain 1 (InterPro:IPR007080), DNA-directed RNA polymerase III largest subunit (InterPro:IPR015700), RNA polymerase Rpb1, domain 4 (InterPro:IPR007083) BEST Arabidopsis thaliana protein match is: RNA polymerase II large subunit (TAIR:AT4G35800.1). & (chl4|520766 : 932.0","protein_coding"
"Smo443461","PACid_15413877","Selaginella moellendorfii ","No description available","protein_coding"
"Smo75337","PACid_15412009","Selaginella moellendorfii ","27.2 RNA.transcription Non-catalytic subunit of nuclear DNA-dependent RNA polymerases II, IV and V homologous to budding yeast RPB3 and the E. coli RNA polymerase alpha subunit. A closely related paralog, encoded by At2g15400, can substitute for At2g15430 in the context of Pol V. NRPB3 FUNCTIONS IN: DNA-directed RNA polymerase activity, protein dimerization activity, DNA binding INVOLVED IN: transcription LOCATED IN: in 6 components CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase, insert domain (InterPro:IPR011262), DNA-directed RNA polymerase, dimerisation (InterPro:IPR011261), DNA-directed RNA polymerase, RpoA/D/Rpb3-type (InterPro:IPR011263), DNA-directed RNA polymerase, 30-40kDa subunit, conserved site (InterPro:IPR001514), DNA-directed RNA polymerase, RBP11-like (InterPro:IPR009025) BEST Arabidopsis thaliana protein match is: DNA-directed RNA polymerase family protein (TAIR:AT2G15400.1) Has 1362 Blast hits to 1362 proteins in 353 species: Archae - 243 Bacteria - 1 Metazoa - 278 Fungi - 347 Plants - 109 Viruses - 0 Other Eukaryotes - 384 (source: NCBI BLink). & (loc_os09g02284.1 : 383.0","protein_coding"
"Smo78436","PACid_15421404","Selaginella moellendorfii ","28.1 DNA.synthesis/chromatin structure POLA3 FUNCTIONS IN: DNA primase activity INVOLVED IN: DNA replication, synthesis of RNA primer, DNA replication EXPRESSED IN: 20 plant structures EXPRESSED DURING: 14 growth stages CONTAINS InterPro DOMAIN/s: DNA primase, small subunit (InterPro:IPR002755), DNA primase, small subunit, eukaryotic/archaeal (InterPro:IPR014052) Has 510 Blast hits to 504 proteins in 249 species: Archae - 95 Bacteria - 0 Metazoa - 124 Fungi - 138 Plants - 44 Viruses - 0 Other Eukaryotes - 109 (source: NCBI BLink). & (chl4|524185 : 305.0","protein_coding"
"Smo78525","PACid_15422157","Selaginella moellendorfii ","28.1 DNA.synthesis/chromatin structure POLA3 FUNCTIONS IN: DNA primase activity INVOLVED IN: DNA replication, synthesis of RNA primer, DNA replication EXPRESSED IN: 20 plant structures EXPRESSED DURING: 14 growth stages CONTAINS InterPro DOMAIN/s: DNA primase, small subunit (InterPro:IPR002755), DNA primase, small subunit, eukaryotic/archaeal (InterPro:IPR014052) Has 510 Blast hits to 504 proteins in 249 species: Archae - 95 Bacteria - 0 Metazoa - 124 Fungi - 138 Plants - 44 Viruses - 0 Other Eukaryotes - 109 (source: NCBI BLink). & (chl4|524185 : 299.0","protein_coding"
"Smo79899","PACid_15405269","Selaginella moellendorfii ","No description available","protein_coding"
"Smo85910","PACid_15401370","Selaginella moellendorfii ","27.2 RNA.transcription Nucleus  encoded plastid RNA polymerase. Localized in mitochondria and chloroplast. DNA/RNA polymerases superfamily protein FUNCTIONS IN: RNA polymerase activity, DNA-directed RNA polymerase activity, DNA binding INVOLVED IN: transcription LOCATED IN: mitochondrion, chloroplast, thylakoid membrane EXPRESSED IN: stem CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase, bacteriophage type (InterPro:IPR002092) BEST Arabidopsis thaliana protein match is: male gametophyte defective 3 (TAIR:AT1G68990.1). & (chl4|518450 : 384.0","protein_coding"
"Smo88080","PACid_15403377","Selaginella moellendorfii ","28.1 DNA.synthesis/chromatin structure DNA primase, large subunit family FUNCTIONS IN: DNA primase activity INVOLVED IN: DNA replication, synthesis of RNA primer EXPRESSED IN: 21 plant structures EXPRESSED DURING: 13 growth stages CONTAINS InterPro DOMAIN/s: DNA primase, large subunit, eukaryotic (InterPro:IPR016558), DNA primase, large subunit, eukaryotic/archaeal (InterPro:IPR007238). & (chl4|523747 : 314.0","protein_coding"
"Smo90820","PACid_15415625","Selaginella moellendorfii ","27.2 RNA.transcription Encodes the unique largest subunit of nuclear DNA-dependent RNA polymerase V homologous to budding yeast RPB1 and the E. coli RNA polymerase beta prime subunit.  Required for normal RNA-directed DNA methylation at non-CG methylation sites and transgene silencing. nuclear RNA polymerase D1B (NRPD1B) CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3223 (InterPro:IPR021602), RNA polymerase, N-terminal (InterPro:IPR006592), RNA polymerase, alpha subunit (InterPro:IPR000722), RNA polymerase Rpb1, domain 3 (InterPro:IPR007066), RNA polymerase Rpb1, domain 1 (InterPro:IPR007080), RNA polymerase Rpb1, domain 5 (InterPro:IPR007081) BEST Arabidopsis thaliana protein match is: nuclear RNA polymerase D1A (TAIR:AT1G63020.2) Has 52919 Blast hits to 31940 proteins in 6835 species: Archae - 366 Bacteria - 10380 Metazoa - 13235 Fungi - 6920 Plants - 7147 Viruses - 757 Other Eukaryotes - 14114 (source: NCBI BLink). & (loc_os02g05880.1 : 202.0","protein_coding"
"Smo98932","PACid_15417434","Selaginella moellendorfii ","No description available","protein_coding"
"Solyc01g017370.1.1","Solyc01g017370.1","Solanum lycopersicum","27.2 RNA.transcription RNA polymerase beta' subunit-1 RPOC1","protein_coding"
"Solyc01g017390.2.1","Solyc01g017390.2","Solanum lycopersicum","27.2 RNA.transcription RNA polymerase beta' subunit-1 RPOC1","protein_coding"
"Solyc01g017440.1.1","Solyc01g017440.1","Solanum lycopersicum","27.2 RNA.transcription RNA polymerase alpha subunit RNA polymerase subunit alpha (RPOA)","protein_coding"
"Solyc01g017460.2.1","Solyc01g017460.2","Solanum lycopersicum","27.2 RNA.transcription RNA polymerase beta' subunit-1 RPOC1","protein_coding"
"Solyc01g017470.2.1","Solyc01g017470.2","Solanum lycopersicum","27.2 RNA.transcription RNA polymerase beta' subunit-1 RPOC1","protein_coding"
"Solyc01g086710.3.1","Solyc01g086710.3","Solanum lycopersicum","27.2 RNA.transcription Encodes a subunit of RNA polymerase 1 (aka RNA polymerase A). nuclear RNA polymerase A2 (NRPA2)","protein_coding"
"Solyc01g096390.3.1","Solyc01g096390.3","Solanum lycopersicum","27.2 RNA.transcription Encodes the unique largest subunit of nuclear DNA-dependent RNA polymerase V homologous to budding yeast RPB1 and the E. coli RNA polymerase beta prime subunit.  Required for normal RNA-directed DNA methylation at non-CG methylation sites and transgene silencing. nuclear RNA polymerase D1B (NRPD1B)","protein_coding"
"Solyc01g098320.3.1","Solyc01g098320.3","Solanum lycopersicum","27.2 RNA.transcription Non-catalytic subunit unique to Nuclear DNA-dependent RNA polymerase V homologous to budding yeast RPB5. NRPE5","protein_coding"
"Solyc02g067590.1.1","Solyc02g067590.1","Solanum lycopersicum","27.2 RNA.transcription Chloroplast DNA-dependent RNA polymerase B subunit. The transcription of this gene is regulated by a nuclear encoded RNA polymerase. This gene has been transferred to mitochondrial genome during crucifer evolution. RNA polymerase subunit beta (RPOB)","protein_coding"
"Solyc02g078260.3.1","Solyc02g078260.3","Solanum lycopersicum","27.2 RNA.transcription Encodes the unique second-largest subunit of DNA-dependent RNA polymerase II the ortholog of budding yeast RPB2 and a homolog of the E. coli RNA polymerase beta subunit. NRPB2","protein_coding"
"Solyc02g083220.2.1","Solyc02g083220.2","Solanum lycopersicum","27.2 RNA.transcription Encodes the unique largest subunit of nuclear DNA-dependent RNA polymerase II the ortholog of budding yeast RPB1 and a homolog of the E. coli RNA polymerase beta prime subunit. RNA polymerase II large subunit (NRPB1)","protein_coding"
"Solyc02g083350.3.1","Solyc02g083350.3","Solanum lycopersicum","27.2 RNA.transcription Encodes the unique largest subunit of nuclear DNA-dependent RNA polymerase II the ortholog of budding yeast RPB1 and a homolog of the E. coli RNA polymerase beta prime subunit. RNA polymerase II large subunit (NRPB1)","protein_coding"
"Solyc02g085560.3.1","Solyc02g085560.3","Solanum lycopersicum","27.2 RNA.transcription SIN-like family protein Has 1807","protein_coding"
"Solyc02g089340.3.1","Solyc02g089340.3","Solanum lycopersicum","27.2 RNA.transcription Nucleus  encoded plastid RNA polymerase. Localized in mitochondria and chloroplast. DNA/RNA polymerases superfamily protein","protein_coding"
"Solyc03g025570.2.1","Solyc03g025570.2","Solanum lycopersicum","27.2 RNA.transcription Non-catalytic subunit common to DNA-dependent RNA polymerases I, II, III and IV homologous to budding yeast RPB5. NRPB5","protein_coding"
"Solyc03g110885.1.1","Solyc03g110885.1","Solanum lycopersicum","27.2 RNA.transcription This gene encodes the second largest, catalytic subunit of the nuclear DNA-dependent RNA polymerase IV (aka RNA polymerase D). The NRPD2 protein is found at nuclear foci that overlap or are adjacent to chromocentromeres but are not fully coincident with chromocentromeres. The loss of NRPD2 leads to the loss of cytosine methylation at pericentromeric 5S genes and AtSN1 retroelements but has no discernible effect on centromere repeat methylation. This suggests that Pol IV primarily affects facultative heterochromatin rather than constitutive heterochromatin. nuclear RNA polymerase D2A (NRPD2A)","protein_coding"
"Solyc03g118380.2.1","Solyc03g118380.2","Solanum lycopersicum","27.2 RNA.transcription Non-catalytic subunit specific to DNA-directed RNA polymerase V homologous to budding yeast RPB7 NRPE7","protein_coding"
"Solyc04g024560.2.1","Solyc04g024560.2","Solanum lycopersicum","29.8 protein.assembly and cofactor ligation hypothetical protein YCF2.2","protein_coding"
"Solyc04g026310.1.1","Solyc04g026310.1","Solanum lycopersicum","27.2 RNA.transcription Chloroplast DNA-dependent RNA polymerase B subunit. The transcription of this gene is regulated by a nuclear encoded RNA polymerase. This gene has been transferred to mitochondrial genome during crucifer evolution. RNA polymerase subunit beta (RPOB)","protein_coding"
"Solyc04g040170.3.1","Solyc04g040170.3","Solanum lycopersicum","27.2 RNA.transcription Non-catalytic subunit unique to Nuclear DNA-dependent RNA polymerase V homologous to budding yeast RPB5. NRPE5","protein_coding"
"Solyc04g045530.3.1","Solyc04g045530.3","Solanum lycopersicum","28.1 DNA.synthesis/chromatin structure DNA primase, large subunit family","protein_coding"
"Solyc04g049730.1.1","Solyc04g049730.1","Solanum lycopersicum","27.2 RNA.transcription RNA polymerase beta' subunit-2 RPOC2","protein_coding"
"Solyc05g010300.3.1","Solyc05g010300.3","Solanum lycopersicum","27.2 RNA.transcription Non-catalytic subunit of nuclear DNA-dependent RNA polymerases II, IV and V homologous to budding yeast RPB3 and the E. coli RNA polymerase alpha subunit. A closely related paralog, encoded by At2g15400, can substitute for At2g15430 in the context of Pol V. NRPB3","protein_coding"
"Solyc05g025650.3.1","Solyc05g025650.3","Solanum lycopersicum","27.3.50 RNA.regulation of transcription.General Transcription RNA polymerase III RPC4","protein_coding"
"Solyc05g045720.1.1","Solyc05g045720.1","Solanum lycopersicum","No description available","protein_coding"
"Solyc05g051620.3.1","Solyc05g051620.3","Solanum lycopersicum","27.3.50 RNA.regulation of transcription.General Transcription RNA polymerase III RPC4","protein_coding"
"Solyc05g051790.3.1","Solyc05g051790.3","Solanum lycopersicum","27.2 RNA.transcription Non-catalytic subunit common to DNA-dependent RNA polymerases I, II, III and IV homologous to budding yeast RPB5. NRPB5","protein_coding"
"Solyc05g053510.2.1","Solyc05g053510.2","Solanum lycopersicum","27.2 RNA.transcription Non-catalytic subunit common to DNA-dependent RNA polymerases I, II, III and IV homologous to budding yeast RPB5. NRPB5","protein_coding"
"Solyc06g005790.3.1","Solyc06g005790.3","Solanum lycopersicum","27.2 RNA.transcription Non-catalytic subunit specific to DNA-directed RNA polymerase II the ortholog of budding yeast RPB7 NRPB7","protein_coding"
"Solyc06g033910.2.1","Solyc06g033910.2","Solanum lycopersicum","27.2 RNA.transcription Non-catalytic subunit specific to DNA-directed RNA polymerase V homologous to budding yeast RPB7 NRPE7","protein_coding"
"Solyc06g036000.3.1","Solyc06g036000.3","Solanum lycopersicum","27.2 RNA.transcription RNA polymerase III subunit RPC82 family protein","protein_coding"
"Solyc06g053330.3.1","Solyc06g053330.3","Solanum lycopersicum","27.3.50 RNA.regulation of transcription.General Transcription DNA bindingDNA-directed RNA polymerases","protein_coding"
"Solyc06g083360.3.1","Solyc06g083360.3","Solanum lycopersicum","27.2 RNA.transcription Non-catalytic subunit common to nuclear DNA-dependent RNA polymerases II, IV and V homologous to budding yeast RPB10. NRPB10","protein_coding"
"Solyc07g005930.3.1","Solyc07g005930.3","Solanum lycopersicum","27.2 RNA.transcription SCABRA 3 (SCA3)","protein_coding"
"Solyc07g006240.3.1","Solyc07g006240.3","Solanum lycopersicum","27.2 RNA.transcription RNA polymerase Rpb7 N-terminal domain-containing protein","protein_coding"
"Solyc07g021220.2.1","Solyc07g021220.2","Solanum lycopersicum","27.2 RNA.transcription RNA polymerase beta' subunit-1 RPOC1","protein_coding"
"Solyc08g028740.1.1","Solyc08g028740.1","Solanum lycopersicum","No description available","protein_coding"
"Solyc08g028950.2.1","Solyc08g028950.2","Solanum lycopersicum","27.2 RNA.transcription RNA polymerase beta' subunit-2 RPOC2","protein_coding"
"Solyc08g075940.3.1","Solyc08g075940.3","Solanum lycopersicum","27.2 RNA.transcription This gene encodes the second largest, catalytic subunit of the nuclear DNA-dependent RNA polymerase IV (aka RNA polymerase D). The NRPD2 protein is found at nuclear foci that overlap or are adjacent to chromocentromeres but are not fully coincident with chromocentromeres. The loss of NRPD2 leads to the loss of cytosine methylation at pericentromeric 5S genes and AtSN1 retroelements but has no discernible effect on centromere repeat methylation. This suggests that Pol IV primarily affects facultative heterochromatin rather than constitutive heterochromatin. nuclear RNA polymerase D2A (NRPD2A)","protein_coding"
"Solyc08g078600.3.1","Solyc08g078600.3","Solanum lycopersicum","27.2 RNA.transcription SIN-like family protein Has 1807","protein_coding"
"Solyc08g080220.2.1","Solyc08g080220.2","Solanum lycopersicum","27.2 RNA.transcription Encodes one of two alternative largest subunits of a putative plant-specific RNA polymerase IV (aka RNA polymerase D).  Required for posttranscriptional gene silencing. nuclear RNA polymerase D1A (NRPD1A)","protein_coding"
"Solyc08g082200.3.1","Solyc08g082200.3","Solanum lycopersicum","28.1 DNA.synthesis/chromatin structure POLA3","protein_coding"
"Solyc09g010500.3.1","Solyc09g010500.3","Solanum lycopersicum","27.2 RNA.transcription One of two highly similar proteins that can serve as a non-catalytic subunit of nuclear DNA-dependent RNA polymerases II and V homologous to budding yeast RPB6 and the E. coli RNA polymerase omega subunit.  Probably redundant with At5g51940. NRPB6B","protein_coding"
"Solyc09g074220.2.1","Solyc09g074220.2","Solanum lycopersicum","No description available","protein_coding"
"Solyc10g007650.3.1","Solyc10g007650.3","Solanum lycopersicum","27.2 RNA.transcription Non-catalytic subunit common to nuclear DNA-dependent RNA polymerases II, IV and V homologous to budding yeast RPB12. NRPB12","protein_coding"
"Solyc10g017920.1.1","Solyc10g017920.1","Solanum lycopersicum","27.2 RNA.transcription Chloroplast DNA-dependent RNA polymerase B subunit. The transcription of this gene is regulated by a nuclear encoded RNA polymerase. This gene has been transferred to mitochondrial genome during crucifer evolution. RNA polymerase subunit beta (RPOB)","protein_coding"
"Solyc10g031560.1.1","Solyc10g031560.1","Solanum lycopersicum","27.2 RNA.transcription RNA polymerase beta' subunit-1 RPOC1","protein_coding"
"Solyc10g078880.2.1","Solyc10g078880.2","Solanum lycopersicum","27.2 RNA.transcription Encodes a subunit of RNA polymerase III (aka RNA polymerase C). nuclear RNA polymerase C2 (NRPC2)","protein_coding"
"Solyc10g080350.2.1","Solyc10g080350.2","Solanum lycopersicum","27.2 RNA.transcription Encodes a subunit of RNA polymerase I (aka RNA polymerase A). nuclear RNA polymerase A1 (NRPA1)","protein_coding"
"Solyc11g072730.2.1","Solyc11g072730.2","Solanum lycopersicum","27.2 RNA.transcription Encodes a subunit of RNA polymerase III (aka RNA polymerase C). nuclear RNA polymerase C1 (NRPC1)","protein_coding"
"Solyc12g010600.2.1","Solyc12g010600.2","Solanum lycopersicum","27.2 RNA.transcription Encodes the unique second-largest subunit of DNA-dependent RNA polymerase II the ortholog of budding yeast RPB2 and a homolog of the E. coli RNA polymerase beta subunit. NRPB2","protein_coding"
"Solyc12g015780.2.1","Solyc12g015780.2","Solanum lycopersicum","27.2 RNA.transcription RNA polymerase I subunit 43 (RPAC43)","protein_coding"
"Solyc12g035870.2.1","Solyc12g035870.2","Solanum lycopersicum","27.2 RNA.transcription Chloroplast DNA-dependent RNA polymerase B subunit. The transcription of this gene is regulated by a nuclear encoded RNA polymerase. This gene has been transferred to mitochondrial genome during crucifer evolution. RNA polymerase subunit beta (RPOB)","protein_coding"
"Solyc12g035890.2.1","Solyc12g035890.2","Solanum lycopersicum","27.2 RNA.transcription RNA polymerase alpha subunit RNA polymerase subunit alpha (RPOA)","protein_coding"
"Solyc12g035930.1.1","Solyc12g035930.1","Solanum lycopersicum","27.2 RNA.transcription Chloroplast DNA-dependent RNA polymerase B subunit. The transcription of this gene is regulated by a nuclear encoded RNA polymerase. This gene has been transferred to mitochondrial genome during crucifer evolution. RNA polymerase subunit beta (RPOB)","protein_coding"
"Solyc12g096910.1.1","Solyc12g096910.1","Solanum lycopersicum","27.2 RNA.transcription RNA polymerase beta' subunit-2 RPOC2","protein_coding"
"Zm00001d000362","No alias","Zea mays","27.2 RNA.transcription Encodes the unique largest subunit of nuclear DNA-dependent RNA polymerase II the ortholog of budding yeast RPB1 and a homolog of the E. coli RNA polymerase beta prime subunit. RNA polymerase II large subunit (NRPB1)","protein_coding"
"Zm00001d002125","GRMZM2G054225","Zea mays","27.2 RNA.transcription This gene encodes the second largest, catalytic subunit of the nuclear DNA-dependent RNA polymerase IV (aka RNA polymerase D). The NRPD2 protein is found at nuclear foci that overlap or are adjacent to chromocentromeres but are not fully coincident with chromocentromeres. The loss of NRPD2 leads to the loss of cytosine methylation at pericentromeric 5S genes and AtSN1 retroelements but has no discernible effect on centromere repeat methylation. This suggests that Pol IV primarily affects facultative heterochromatin rather than constitutive heterochromatin. nuclear RNA polymerase D2A (NRPD2A)","protein_coding"
"Zm00001d003203","GRMZM2G080176","Zea mays","27.2 RNA.transcription Encodes a subunit of RNA polymerase III (aka RNA polymerase C). nuclear RNA polymerase C1 (NRPC1)","protein_coding"
"Zm00001d003242","GRMZM2G099183","Zea mays","27.2 RNA.transcription Non-catalytic subunit common to DNA-dependent RNA polymerases I, II, III and IV homologous to budding yeast RPB5. NRPB5","protein_coding"
"Zm00001d003917","GRMZM2G025294","Zea mays","27.3.50 RNA.regulation of transcription.General Transcription RNA polymerase III RPC4","protein_coding"
"Zm00001d004956","GRMZM2G469969","Zea mays","21.2.1.5 redox.ascorbate and glutathione.ascorbate.L-Galactono-1,4-lactone dehydrogenase L-Galactono-1,4-lactone dehydrogenase, catalyzes the final step of ascorbate biosynthesis "L-galactono-1,4-lactone dehydrogenase" (GLDH)","protein_coding"
"Zm00001d005295","GRMZM5G874167","Zea mays","27.2 RNA.transcription Non-catalytic subunit of nuclear DNA-dependent RNA polymerases II, IV and V homologous to budding yeast RPB3 and the E. coli RNA polymerase alpha subunit. A closely related paralog, encoded by At2g15400, can substitute for At2g15430 in the context of Pol V. NRPB3","protein_coding"
"Zm00001d005423","No alias","Zea mays","27.2 RNA.transcription Non-catalytic subunit common to nuclear DNA-dependent RNA polymerases II, IV and V homologous to budding yeast RPB12. NRPB12","protein_coding"
"Zm00001d009888","No alias","Zea mays","28.1 DNA.synthesis/chromatin structure POLA3","protein_coding"
"Zm00001d012557","GRMZM2G162697","Zea mays","27.2 RNA.transcription Non-catalytic subunit common to DNA-dependent RNA polymerases I, II, III and IV homologous to budding yeast RPB5. NRPB5","protein_coding"
"Zm00001d013780","GRMZM2G086904","Zea mays","27.2 RNA.transcription One of two highly similar proteins that can serve as a non-catalytic subunit of nuclear DNA-dependent RNA polymerases II and V homologous to budding yeast RPB6 and the E. coli RNA polymerase omega subunit.  Probably redundant with At5g51940. NRPB6B","protein_coding"
"Zm00001d014049","No alias","Zea mays","27.2 RNA.transcription SCABRA 3 (SCA3)","protein_coding"
"Zm00001d014290","GRMZM2G018558","Zea mays","29.5 protein.degradation Cytosol aminopeptidase family protein","protein_coding"
"Zm00001d019553","GRMZM2G146331","Zea mays","27.2 RNA.transcription Non-catalytic subunit common to nuclear DNA-dependent RNA polymerases II, IV and V homologous to budding yeast RPB12. NRPB12","protein_coding"
"Zm00001d021335","GRMZM2G098764","Zea mays","27.2 RNA.transcription RNA polymerase Rpb7 N-terminal domain-containing protein","protein_coding"
"Zm00001d022169","GRMZM2G381395","Zea mays","27.2 RNA.transcription Nucleus  encoded plastid RNA polymerase. Localized in mitochondria and chloroplast. DNA/RNA polymerases superfamily protein","protein_coding"
"Zm00001d023462","GRMZM2G044317","Zea mays","28.1 DNA.synthesis/chromatin structure DNA primase, large subunit family","protein_coding"
"Zm00001d023587","GRMZM5G803992","Zea mays","27.2 RNA.transcription Non-catalytic subunit common to nuclear DNA-dependent RNA polymerases II, IV and V homologous to budding yeast RPB10. NRPB10","protein_coding"
"Zm00001d023696","No alias","Zea mays","27.2 RNA.transcription SCABRA 3 (SCA3)","protein_coding"
"Zm00001d024470","GRMZM2G133512","Zea mays","27.2 RNA.transcription This gene encodes the second largest, catalytic subunit of the nuclear DNA-dependent RNA polymerase IV (aka RNA polymerase D). The NRPD2 protein is found at nuclear foci that overlap or are adjacent to chromocentromeres but are not fully coincident with chromocentromeres. The loss of NRPD2 leads to the loss of cytosine methylation at pericentromeric 5S genes and AtSN1 retroelements but has no discernible effect on centromere repeat methylation. This suggests that Pol IV primarily affects facultative heterochromatin rather than constitutive heterochromatin. nuclear RNA polymerase D2A (NRPD2A)","protein_coding"
"Zm00001d024583","GRMZM2G044306","Zea mays","27.2 RNA.transcription Encodes the unique largest subunit of nuclear DNA-dependent RNA polymerase II the ortholog of budding yeast RPB1 and a homolog of the E. coli RNA polymerase beta prime subunit. RNA polymerase II large subunit (NRPB1)","protein_coding"
"Zm00001d025234","GRMZM2G130351","Zea mays","28.1 DNA.synthesis/chromatin structure DNA primase, large subunit family","protein_coding"
"Zm00001d026421","GRMZM2G427031","Zea mays","27.2 RNA.transcription This gene encodes the second largest, catalytic subunit of the nuclear DNA-dependent RNA polymerase IV (aka RNA polymerase D). The NRPD2 protein is found at nuclear foci that overlap or are adjacent to chromocentromeres but are not fully coincident with chromocentromeres. The loss of NRPD2 leads to the loss of cytosine methylation at pericentromeric 5S genes and AtSN1 retroelements but has no discernible effect on centromere repeat methylation. This suggests that Pol IV primarily affects facultative heterochromatin rather than constitutive heterochromatin. nuclear RNA polymerase D2A (NRPD2A)","protein_coding"
"Zm00001d030443","No alias","Zea mays","27.2 RNA.transcription Chloroplast DNA-dependent RNA polymerase B subunit. The transcription of this gene is regulated by a nuclear encoded RNA polymerase. This gene has been transferred to mitochondrial genome during crucifer evolution. RNA polymerase subunit beta (RPOB)","protein_coding"
"Zm00001d030829","No alias","Zea mays","27.2 RNA.transcription SCABRA 3 (SCA3)","protein_coding"
"Zm00001d031333","No alias","Zea mays","27.2 RNA.transcription Encodes the unique second-largest subunit of DNA-dependent RNA polymerase II the ortholog of budding yeast RPB2 and a homolog of the E. coli RNA polymerase beta subunit. NRPB2","protein_coding"
"Zm00001d031457","No alias","Zea mays","27.2 RNA.transcription Encodes one of two alternative largest subunits of a putative plant-specific RNA polymerase IV (aka RNA polymerase D).  Required for posttranscriptional gene silencing. nuclear RNA polymerase D1A (NRPD1A)","protein_coding"
"Zm00001d032587","GRMZM2G388892","Zea mays","27.2 RNA.transcription Encodes a subunit of RNA polymerase 1 (aka RNA polymerase A). nuclear RNA polymerase A2 (NRPA2)","protein_coding"
"Zm00001d032864","No alias","Zea mays","27.2 RNA.transcription Encodes the unique largest subunit of nuclear DNA-dependent RNA polymerase II the ortholog of budding yeast RPB1 and a homolog of the E. coli RNA polymerase beta prime subunit. RNA polymerase II large subunit (NRPB1)","protein_coding"
"Zm00001d033099","GRMZM2G013600","Zea mays","27.2 RNA.transcription One of two highly similar proteins that can serve as a non-catalytic subunit of nuclear DNA-dependent RNA polymerases II and V homologous to budding yeast RPB6 and the E. coli RNA polymerase omega subunit.  Probably redundant with At5g51940. NRPB6B","protein_coding"
"Zm00001d033218","GRMZM2G020142","Zea mays","27.2 RNA.transcription Encodes the unique second-largest subunit of DNA-dependent RNA polymerase II the ortholog of budding yeast RPB2 and a homolog of the E. coli RNA polymerase beta subunit. NRPB2","protein_coding"
"Zm00001d034215","No alias","Zea mays","27.2 RNA.transcription SCABRA 3 (SCA3)","protein_coding"
"Zm00001d035953","No alias","Zea mays","27.2 RNA.transcription SIN-like family protein Has 1807","protein_coding"
"Zm00001d035954","GRMZM2G155943","Zea mays","27.2 RNA.transcription SIN-like family protein Has 1807","protein_coding"
"Zm00001d035960","No alias","Zea mays","27.2 RNA.transcription Encodes a subunit of RNA polymerase III (aka RNA polymerase C). nuclear RNA polymerase C2 (NRPC2)","protein_coding"
"Zm00001d036307","GRMZM2G039949","Zea mays","27.2 RNA.transcription RNA polymerase beta' subunit-1 RPOC1","protein_coding"
"Zm00001d037574","GRMZM2G040702","Zea mays","27.2 RNA.transcription Non-catalytic subunit specific to DNA-directed RNA polymerase V homologous to budding yeast RPB7 NRPE7","protein_coding"
"Zm00001d038139","GRMZM2G179346","Zea mays","27.2 RNA.transcription Non-catalytic subunit specific to DNA-directed RNA polymerase II the ortholog of budding yeast RPB7 NRPB7","protein_coding"
"Zm00001d039307","GRMZM2G470305","Zea mays","27.2 RNA.transcription Encodes the unique largest subunit of nuclear DNA-dependent RNA polymerase V homologous to budding yeast RPB1 and the E. coli RNA polymerase beta prime subunit.  Required for normal RNA-directed DNA methylation at non-CG methylation sites and transgene silencing. nuclear RNA polymerase D1B (NRPD1B)","protein_coding"
"Zm00001d039681","GRMZM2G464212","Zea mays","35.2 not assigned.unknown unknown protein","protein_coding"
"Zm00001d039850","No alias","Zea mays","27.2 RNA.transcription Encodes the unique largest subunit of nuclear DNA-dependent RNA polymerase II the ortholog of budding yeast RPB1 and a homolog of the E. coli RNA polymerase beta prime subunit. RNA polymerase II large subunit (NRPB1)","protein_coding"
"Zm00001d041354","No alias","Zea mays","28.1 DNA.synthesis/chromatin structure Similar to POL2A, DNA polymerase epsilon catalytic subunit. Essential for Arabidopsis growth. Null homozygotes are embryo lethal, partial loss of function alleles show embryo patterning defects such as root pole displacement. Delayed progression through cell cycle results in embryos with smaller numbers of larger cells. TILTED 1 (TIL1)","protein_coding"
"Zm00001d042524","GRMZM2G392683","Zea mays","27.2 RNA.transcription Encodes the unique largest subunit of nuclear DNA-dependent RNA polymerase II the ortholog of budding yeast RPB1 and a homolog of the E. coli RNA polymerase beta prime subunit. RNA polymerase II large subunit (NRPB1)","protein_coding"
"Zm00001d042567","GRMZM2G006453","Zea mays","27.3.50 RNA.regulation of transcription.General Transcription RNA polymerase III RPC4","protein_coding"
"Zm00001d042827","No alias","Zea mays","28.1 DNA.synthesis/chromatin structure Similar to POL2A, DNA polymerase epsilon catalytic subunit. Essential for Arabidopsis growth. Null homozygotes are embryo lethal, partial loss of function alleles show embryo patterning defects such as root pole displacement. Delayed progression through cell cycle results in embryos with smaller numbers of larger cells. TILTED 1 (TIL1)","protein_coding"
"Zm00001d043127","No alias","Zea mays","27.2 RNA.transcription SCABRA 3 (SCA3)","protein_coding"
"Zm00001d044251","GRMZM2G061890","Zea mays","27.2 RNA.transcription RNA polymerase III subunit RPC82 family protein","protein_coding"
"Zm00001d045595","No alias","Zea mays","27.2 RNA.transcription SCABRA 3 (SCA3)","protein_coding"
"Zm00001d046835","GRMZM2G115564","Zea mays","27.2 RNA.transcription SCABRA 3 (SCA3)","protein_coding"
"Zm00001d047018","GRMZM2G175799","Zea mays","27.2 RNA.transcription Encodes the unique largest subunit of nuclear DNA-dependent RNA polymerase II the ortholog of budding yeast RPB1 and a homolog of the E. coli RNA polymerase beta prime subunit. RNA polymerase II large subunit (NRPB1)","protein_coding"
"Zm00001d048834","GRMZM2G453684","Zea mays","27.3.50 RNA.regulation of transcription.General Transcription DNA bindingDNA-directed RNA polymerases","protein_coding"
"Zm00001d049406","GRMZM2G540834","Zea mays","No description available","protein_coding"
"Zm00001d053872","GRMZM2G153797","Zea mays","27.2 RNA.transcription Encodes the unique largest subunit of nuclear DNA-dependent RNA polymerase V homologous to budding yeast RPB1 and the E. coli RNA polymerase beta prime subunit.  Required for normal RNA-directed DNA methylation at non-CG methylation sites and transgene silencing. nuclear RNA polymerase D1B (NRPD1B)","protein_coding"
"Zm00001d054013","GRMZM2G025356","Zea mays","27.2 RNA.transcription RNA polymerase I subunit 43 (RPAC43)","protein_coding"